Apostichopus japonicus (Japanese sea cucumber): 139958596
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Entry
139958596 CDS
T10891
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K06493
integrin beta 3
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03266
Virion - Herpesvirus
ajj04081
Hormone signaling
ajj04145
Phagosome
ajj04148
Efferocytosis
ajj04512
ECM-receptor interaction
ajj04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
ajj04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
139958596
Exosome [BR:
ajj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139958596
Cell adhesion molecules [BR:
ajj04515
]
Integrins
Integrin beta subunits
139958596
CD molecules [BR:
ajj04090
]
Proteins
139958596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139958596
NCBI-ProteinID:
XP_071811867
LinkDB
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Position
18:6974570..7008897
Genome browser
AA seq
808 aa
AA seq
DB search
MESFIKVLITAFIMSCVLSKEASCESIPECHPAKTCGNCMRINPQCSWCSDVNFTSDVSR
CDSKSFLKQSNCNKTIGRPSSIDYIENAALQDPVYENDDDEEPIEQAVPIQPQEVKIVLR
PGDTQTIRVGVRQVNDYPVDLYYLMDLSHSMKDDLKNLHTLGSLLATEMKKITRSFTLGF
GSFVDKPVAPYSAAEIIQSGNPPCTGCAPAYGFRNELPLNRNTTLFDQKVKSTLISSNQD
DAEGTLDAIAQAALCTEDIGWRNESRRLLLVTSDDTFHIEGDGKMAGILRPFDGRCHLVN
NEYAKTKYYDYPSIGQVNDVLVSNNIISIFATSGLEALYRNLSIALQGSTFSQLRSDSTN
IVQIVSSKYREITESIQISDTSPEGTELRYRVNCSGEARWLQPGEKPECGRIHAGDQISL
EVEVKATKCINQRFEIYPIGFERHLQVHVEVICNCSCESEPDVNTTECTGGNGNRDCGVC
QCLPGYYGDQCECTAENEENQDHKLNDLKCKPDNDTTVLCSGRGECICGECRCNQPANAG
VIISGTYCECNNQGCDLANGEVCGGPERGECVCALDGRTNECQCRPGYTGDKCDCPTQTE
SCRANNGLICNAIGECKCGKCICEKSPKFTGPRCDECVSCDVCDLHTNCVLCKLLNDTEI
LSKEDCDMCSQVIQYVPEFPELDGNEKTCNFPDAEECTVHFQFADVNGTMHIYVKSAKDC
AHSNLIIEGVELQFVILYIVLGIILFGLLLIFIYRLYTWHLDRKEYQQFVAEKEKAQWDK
PESTNPLYKPSTSTVQNPAYGRGSMKTY
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggagtcctttataaaagtgctgattaccgcttttattatgtcctgtgtactttccaaa
gaggcgtcatgtgagagcataccagaatgccacccggcaaagacctgtggtaactgtatg
agaataaacccacagtgtagctggtgcagtgacgtcaatttcacaagcgacgtttctcga
tgcgatagcaagagttttttaaagcagtcaaattgcaacaaaactataggtagaccttca
tcaatagattacatagagaacgccgctttacaggaccctgtttacgaaaatgatgatgat
gaggaaccgatagagcaggcggtcccaattcaaccacaagaagtcaagattgtgttgaga
ccaggtgacacacagacgatacgggttggtgtgcggcaggtcaatgattacccggtggat
ttatattatttaatggatctcagccattccatgaaggatgatctgaaaaatctacacact
ctcggatccttactcgcaactgaaatgaagaaaattactcgaagttttacccttggattt
ggatctttcgtggacaaacctgtggcaccatattcagctgcagagataatacagtcaggt
aatccaccgtgtacaggttgcgcaccggcttacggcttcaggaatgagttaccactaaat
agaaacacaactctatttgatcaaaaagtaaaaagcacattaatttctagtaaccaggac
gacgctgaaggaacgttagatgctattgctcaggctgccctttgcacggaggacataggc
tggagaaacgagtcacgccgtctgcttctcgtcacatcagacgacacatttcacattgaa
ggagatggcaagatggcgggaattcttagaccatttgacggtagatgccaccttgttaac
aatgaatacgccaaaacaaaatactacgattacccttccatcgggcaggtgaatgatgtg
ttagtgtcaaataacataatttctatcttcgccacttccggtttggaagcactgtacagg
aacttaagtattgctttacagggatccaccttcagtcagctcagatcagactcgacaaac
attgtacaaattgtttcctctaaataccgggaaattactgaatcaatacagatatcggac
acatctccggaagggactgaactccgctatagggtcaattgttctggcgaagcacgctgg
cttcaaccgggtgaaaaaccggaatgcggacgtatccacgctggggaccaaatatcactc
gaggtagaagtgaaagcaacaaaatgtatcaaccagaggtttgaaatctatccgataggc
tttgaacgccatttacaggtccacgtagaagtcatttgcaattgttcttgtgaatcagaa
ccggatgtcaatactaccgagtgtactggcggcaatggtaatcgtgattgcggtgtttgt
caatgtcttcctggttactatggtgatcaatgtgaatgcaccgcggagaacgaagagaat
caagaccacaaacttaacgacctcaagtgtaaacctgacaacgacacgactgtcttatgt
tctggtcgaggagaatgcatatgtggagaatgtcgctgcaaccaaccggctaacgctgga
gtaataatatcgggaacctattgcgagtgcaataaccaagggtgtgatttagcgaacggt
gaagtttgtggcggaccagagagaggggagtgcgtatgcgcattagatggacgaacaaat
gaatgccaatgtcggccaggctacaccggtgataaatgcgactgccccacacaaaccgaa
tcatgtcgtgctaataatggactgatttgcaatgctattggcgaatgtaaatgcggaaaa
tgtatttgtgaaaagtcacccaaatttactggacctcgatgtgatgaatgtgtgtcatgt
gatgtgtgtgatcttcataccaactgtgtcttgtgcaaactattaaacgacacagaaatt
ctatctaaagaggattgtgatatgtgctcacaggtcatacaatatgtccctgagttccca
gaattagatggcaatgagaagacttgtaatttcccagatgctgaagaatgcactgttcat
ttccagtttgcagatgtcaatggaaccatgcatatttatgttaaatcagctaaagactgt
gcccattctaaccttataatagagggcgttgaattacaatttgtcattctttacatcgtt
ctgggtatcatcctgttcggacttttactgatcttcatttaccgcctctatacgtggcat
ctcgaccggaaggagtaccaacaattcgtcgcagaaaaagaaaaggctcaatgggataag
ccagagtccaccaaccctctttacaagccctcgacgtcaacggtacagaacccagcgtac
ggtaggggcagtatgaagacctactga
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