Apostichopus japonicus (Japanese sea cucumber): 139958639
Help
Entry
139958639 CDS
T10891
Name
(RefSeq) glycine--tRNA ligase-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139958639
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ajj01007
]
139958639
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ajj03016
]
139958639
03029 Mitochondrial biogenesis [BR:
ajj03029
]
139958639
Enzymes [BR:
ajj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
139958639
Amino acid related enzymes [BR:
ajj01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
139958639
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
139958639
Mitochondrial biogenesis [BR:
ajj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
139958639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
139958639
NCBI-ProteinID:
XP_071811964
LinkDB
All DBs
Position
18:3150871..3162666
Genome browser
AA seq
737 aa
AA seq
DB search
MLLQRFLTSLRLKASIFPTLLSNLTSLNVEGLQRGTQVVIFRNTFTKVNRTSQLSFRGTL
STMSDDPEKTLAPLRAAVKEQGDLVRKLKAEAASEIDVKKAVTELKARKKILEDKELALT
TDETFDRVKLEDTLKRRFFYDQSFAIYGGVSGLYDFGPVGCAIKANFINLWRSHFIIEEG
MLEVDCSILTPHPVFKASGHVDRFADYMVKDVKTGECFRADHLVKAHLEKLMKDKKTTTE
MKDEMNTVLALLDNYDQAGLAEVLKKYNVTSPLTNNDITEPVEFNLMFATQIGPAGNMPG
FLRPETAQGIFVNFKRLLEFNQNRLPFAAAQIGQSFRNEISPRSGLLRVREFTQLEIEHF
IDPSDKDHPKFEDVANLEVLLFSGSNQMSGKSAMKTTFGQAVAEGVINSQVLAYFMARTY
LFLLKVGVHPDKCRFRQHLDNEMAHYACDCWDAETKTSYGWVEVVGCADRSCYDLNQHAQ
HSKVPLVAVKTLKEPKVIDVVEVLANKGAVGKKFKKDAKILMTHFAEMTKEAADTFDKNL
QGKDEISLDVNGKTFTLAKDMVTVKRYQKTVHAEDLTPSVIEPSFGLGRIMYSLLEHNFR
VREGDEQRTYFTLPQAIAPYKCSVLPLSNNKEFDPFVKQLVRAFSDEGVSHTVDSSSVSI
GRRYARTDEIGIPYGITVDFDTIKEPHTATLRERDSLEQIRAPLTELPGIVKDLVGGKQS
WSDVLKKFPLFQGQEAS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgttactccaaagatttctcacaagccttcgcttgaaagcttccatctttccaacttta
ctgagcaatttaaccagcttaaacgtagaaggcctacagagaggcacacaggtcgtcata
ttcagaaatacattcacgaaagtcaacagaacgtcgcagttgtcctttcgaggtacactt
tcaacgatgtcagacgatccggaaaaaactcttgctccgttacgtgcggcagtcaaggaa
cagggggaccttgtgagaaagttgaaggcagaggcagcctccgagatcgacgtcaagaaa
gcggtaacagaactgaaagctcgcaaaaagattcttgaggataaggaattagctctcact
acagatgaaaccttcgatcgtgtgaagctagaagacacgttgaaaagacgattcttctac
gaccagtcctttgctatctatggaggtgtcagtggtttgtatgactttggtcctgttgga
tgcgccatcaaggcaaactttatcaatctatggaggagtcattttatcatcgaggaaggg
atgctggaggtagattgctccatcctgacaccacacccagtattcaaagcgtctggtcat
gtggacaggtttgctgattacatggtgaaagatgtcaaaactggagaatgtttcagagct
gaccaccttgtgaaagcccatctcgaaaaactgatgaaggataagaagacgacgacagag
atgaaggacgagatgaacacggtcttggctctcctggataattacgaccaagctggcctg
gcggaggtcctgaagaagtacaacgtgacatcaccgctgaccaataacgacatcacagaa
cctgttgaattcaacctgatgtttgccacccagatcggacctgctggcaacatgccagga
tttttgagaccagaaacagctcagggcatatttgtgaatttcaagaggcttctagaattc
aatcagaatcggctcccattcgctgccgctcaaatcggccagtcatttagaaacgaaatt
tcaccaagatcgggactgctacgagtgagagaattcacccagttagagatcgagcacttc
atcgaccccagcgacaaagatcatccaaagtttgaggacgttgctaacctggaagtactt
ctcttctctgggtcaaaccagatgtctggaaaatcggctatgaagacgacatttggtcaa
gcagtggccgagggtgttatcaacagtcaggtcctggcatactttatggcaaggacgtac
ctcttcctgctcaaagtgggcgtacatcctgacaagtgtcgtttccgtcaacatctggat
aacgagatggctcactacgcctgcgattgctgggacgccgaaaccaaaacatcttacggc
tgggtggaagttgttggatgtgcagacagatcctgttacgatttaaatcaacatgcccaa
cactcaaaggttccattggtagcggtgaagacactaaaagaaccgaaagtaattgatgtc
gtagaggtcctggctaacaagggcgcagtggggaagaaattcaagaaagacgccaaaatt
ctgatgacccattttgcagaaatgactaaagaagctgctgatacatttgacaagaatttg
cagggaaaagatgagatttcgctggatgtaaatggcaaaacgttcacgctggctaaggac
atggtaacagtaaaacgctaccagaagaccgtacacgcggaagatttgactccttctgtg
attgaaccatccttcggtctcggtcgcatcatgtactcgctcctggaacacaatttcaga
gtgagggaaggtgatgaacagagaacgtattttacgttaccacaagctattgctccatat
aaatgttctgtgctccccctcagtaacaacaaagagtttgacccttttgtcaaacagctt
gttcgagctttctctgacgaaggtgtctctcacaccgtggattctagttctgtgtcgatc
ggaagaaggtacgccaggacggatgagattggcataccctacggtataacggtggatttt
gacaccatcaaggaacctcacactgcaacacttagggagcgagattctctggaacaaata
cgagccccgctcacagaacttcctggaattgtgaaagacttagtaggtggcaagcaaagc
tggtctgatgtcttaaaaaagtttcctctattccaaggccaggaagcttcttaa
DBGET
integrated database retrieval system
