Apostichopus japonicus (Japanese sea cucumber): 139958665
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Entry
139958665 CDS
T10891
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139958665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajj03021
]
139958665
03036 Chromosome and associated proteins [BR:
ajj03036
]
139958665
Transcription machinery [BR:
ajj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139958665
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
139958665
PBAF complex
139958665
GBAF(ncBAF) complex
139958665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
139958665
NCBI-ProteinID:
XP_071812019
LinkDB
All DBs
Position
18:2327936..2463183
Genome browser
AA seq
490 aa
AA seq
DB search
MASNPYLTSALHAQQRFPHAQGGPGMRAFPPTSYPESSKTHNSSSTQSAGTSKQRPQHMG
GGMPPPYGGGRPGMHHNFVEQSRKRHAAQMEAQKKSQSARKKRRMADKVLPLQIRHLVPE
SQAYMDLLAFERKLDSTIMRKRLDIQEALKRPMKQKRKLRVFISNTYNPGKPDADEKDEG
SIPSWELRVEGRLLDDPHAPKYEAKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTSN
TNETDGFQVKRPGSENVKCTLLLLLDHQPPQYKLDPRLARLLGVHTQTRPVIITALWQYI
KTHKLQDPHEREYINNDNYFQQIFECQRMKFSEIPERLHRLLHAPDPIVIHHVINVDSKD
QKKTACYDIDVEVDDTLKEQMKSFLLSTTSQQEIANLDNKIHETVDTINQLKIQRQFMLG
FARDPQAFISEFLVSQSQDLRTMKDIVGNPEDERHGEFYLQPWIQEAVRRYFYAKVQQRR
AELEQALGNS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaacccttacttaacgtctgctcttcatgctcagcaacgatttcctcatgcc
caaggaggaccaggaatgagagcctttcccccaacctcgtatcctgagtccagtaaaacc
cacaactccagttctactcagtctgcaggaacgtcaaagcagagaccccagcatatgggt
gggggtatgccacccccatatgggggtggaaggcctggtatgcaccacaactttgtggaa
cagtcaaggaagagacatgcagcccagatggaagcccagaagaaatctcaaagcgcaagg
aagaaacgccgtatggcagataaagtgctaccactccagatacgacatctggttcctgaa
tctcaagcctacatggacctgctggcatttgagagaaagctggactctaccatcatgaga
aaaaggctggatattcaagaagcattgaaacgccccatgaaacaaaaacggaagctgaga
gtgttcatctccaacacctacaaccctggtaaacctgatgccgatgagaaggatgaaggg
agcatcccatcctgggagctcagggtagagggaagactacttgatgatccacatgcaccc
aaatatgaagctaaacagaagaggaaattttcatctttcttcaagagtcttgtgattgaa
cttgacaaggacctttatggacccgataatcaccttgtagagtggcatcgtaccagcaac
acaaacgaaactgacggattccaggtgaagagaccaggcagtgagaatgtgaagtgcacc
ctcttgctcctgctggaccatcagccaccacagtacaaactggaccctcgtctcgcccgt
ctccttggcgttcacactcagacccgccccgtgataattacagctttgtggcagtatatc
aagactcacaagctgcaggatccacatgagagggagtacatcaataatgataattacttc
cagcagatctttgaatgtcagcggatgaaattttctgaaatccctgagcgacttcatcgc
ctcctccacgcccctgacccaattgtgatacaccatgtgatcaatgttgatagcaaggac
cagaagaagactgcctgctatgatattgatgttgaagtggatgatacactgaaggagcag
atgaaatccttcctcctctccactaccagccaacaagagattgctaatcttgacaacaag
attcatgagaccgtcgacaccatcaaccaactcaagattcagcgacagtttatgcttggc
tttgccagagatccccaagcatttatcagcgagttcctagtatcccagagtcaggatctt
aggactatgaaagacatcgttggtaacccggaggatgaacgtcacggtgagttttacctc
cagccatggatccaggaagccgtacgtcggtatttctatgccaaggtccaacaaagacgt
gcagaactggagcaagctctaggaaactcttag
DBGET
integrated database retrieval system
