Apostichopus japonicus (Japanese sea cucumber): 139958725
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Entry
139958725 CDS
T10891
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04512
ECM-receptor interaction
ajj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139958725
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139958725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ajj04515
]
139958725
Cell adhesion molecules [BR:
ajj04515
]
Integrins
Integrin alpha subunits
139958725
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
FG-GAP
Integrin_A_Ig_2
FG-GAP_3
Integrin_A_Ig_1
Piwi
BVU_2266-like
Motif
Other DBs
NCBI-GeneID:
139958725
NCBI-ProteinID:
XP_071812123
LinkDB
All DBs
Position
18:15493952..15532428
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AA seq
1067 aa
AA seq
DB search
MSERMEYLMPVIMCLIQMLRMCASFSLDTALPIIHYGEEGSLFGFSVAMHSEGTQTKLLV
GAPKAQSIEHEDIVKGGLVYHCPIINSSESCQIIAVDTKGQIRNREGTQTANKSHQLFGS
TVRSAGPDSYVLVCAPNHVRFFDMDEPDKEEHVASGICYIVSNVFTSPETMKFQPCKDYT
TMTKQMCQLGFSGVMFEDSFVVGAPGSYFWQGQVFLQTLTRPLQLLKTQSKSTRFDDTNQ
GYSIAVGDLDGNGTIDYVTGSPKRYNMFGSVLVYSSLASFQDPLFEIIGYQFGAYFGHSV
EATDLNGDGLDDLVVGAPTYSDAKAAVPLHDVGRIYIYYQQDSGILRMDPQVIQGLKGSG
RFGFTLAALGDINLDGFNDLAVSAPYENNDEGAVYIFSGYENGLHSTASQIITPPKHGAR
LFRGFGFALSGNFDIDGNGYTDLLVGAPHSSSVILYRTNPIIRLALNIEFDVNGVTFRNH
NLELPDGSTVVGFNTTACLQYEGTNVNDDANFRCSLKADSLRTVKTRAVFSHEGVQREIV
SVVNAQKSQTHCMTYTTFLKNNIEEYNPLVFTMRCSLLHESLGSAERLNNVLPNIEEIAV
SKLPIFTNCSSENCFSDLQLVVQRNIDNRTESGTVTIGEPTPINVTVTISNLGFEVYGAQ
LFVSLPQGIYYSDVRRTDNHIVSCSLEGGSMTVICDLESPFMGDNHSVSFDILLTADKVD
GSAEIIDIAFHVTSSIVETGERASDNSALIRIPVDARVSVKMYSDSMPTHQSIISDEEYV
YYPTYQHELEVGREVTHVYAVQNLGPSDISEAELTIYWPMHSYYGYLLYLVNVTLSTGEI
CHVDNELNPMNLELIQREISAYSEVNFTEQTNSTASDSDPYESVTEGYYIDIPTNITRNN
VKRTVEKSQTASHDRETRYRDFICKSGKEECYTIRCRLTNLIGSKKRNIVTVQLRSRLWN
DTFKLLPGNEWRFTSTAVLNVTHLPYSVQPNNYPTIYASTTTAVTKLEFTELPSKDPPLW
IIIFSIFCGILLLAAILGILTKIGFFTRSRNFKKMEEEKEEVTPVDL
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagagaatggaatacttaatgcctgtgataatgtgtctcattcaaatgttgagg
atgtgtgctagcttcagccttgataccgctctacccataatacactacggtgaagaaggc
agtctgtttggattctcggtggccatgcacagtgaagggacacagaccaagttactcgtt
ggcgctccaaaggctcagtccatcgaacatgaagatattgttaagggtggcttggtgtac
cattgtccgattatcaattcttcagaatcttgccaaataatagcagtagacactaaagga
caaataagaaacagagaggggacacaaactgcaaataaatctcatcaactatttgggtca
accgtgcgaagcgcaggtccggattcatatgtgctggtgtgcgctccaaatcacgtgagg
tttttcgatatggatgagcctgacaaagaagaacatgtcgcaagtgggatctgttacatt
gtatcgaatgtttttacatctccggaaaccatgaagtttcaaccttgtaaagattataca
acaatgacaaagcagatgtgtcaacttgggttttctggtgtaatgtttgaggattctttt
gtcgtcggcgctccaggaagctatttctggcaaggtcaggttttcctacagactttaaca
cgacccctccagcttttgaaaacacagagtaaatctaccagattcgacgacactaatcaa
ggttactccattgctgttggcgatttagacggtaacggaaccattgattacgtcacaggt
tcgcccaaacgctacaatatgttcggatcagtacttgtctattcatctttggcttcattt
caagatcctctgtttgaaattatcggataccaattcggtgcttattttggtcacagcgta
gaagcgacagatcttaacggtgatggattggatgacctcgtagttggggctcccacatac
tctgatgccaaggccgcagtaccccttcacgatgttggacgtatctacatttactaccaa
caagattccggcattctgagaatggatcctcaggttattcagggattgaagggtagcggt
cggtttggatttactctagcggccctcggagatattaatctcgacggattcaatgattta
gctgtcagtgccccatacgaaaataatgacgagggcgctgtttatatattcagcggatat
gagaacggtttacacagtactgcgagtcagataatcacaccaccaaaacatggtgcacgt
ttattccgaggttttggctttgcgttatctggaaattttgacatcgatggaaatggttac
acagatcttttagtaggtgctcctcattcatcttctgttatactgtacagaactaaccca
atcattcgtttggctctgaacatcgaatttgacgtcaacggtgtaacgtttcgcaaccat
aatctggaattgccggatggctctaccgtagttgggttcaacactactgcatgtttacag
tacgagggtacaaatgtcaacgatgatgcaaactttagatgtagtcttaaagcagacagc
ctgaggacagtgaagactcgcgcagtcttcagtcatgagggagttcagagggaaatcgtg
tcagtagtgaatgcacaaaaaagccaaactcattgtatgacgtatacaactttcctcaag
aataacattgaagaatataatccacttgtatttactatgaggtgttcgctgttacacgag
tcacttggatcggctgaacgtctgaataatgtccttccaaatatagaggaaatcgccgtt
agtaagcttccaatatttacaaactgttcaagcgagaactgtttttcggatctgcaactc
gttgttcaaagaaatattgacaatcgaacagaaagtggaaccgttactatcggtgaacca
actcctatcaacgtcacggtaaccataagcaacctaggatttgaggtctatggcgcgcaa
ttgtttgttagtctcccccagggaatttattactcggacgtcagaagaacggataaccac
atcgtatcatgtagtcttgaaggtggatcaatgacggtcatttgtgacttagagagccct
ttcatgggagacaaccattccgtgagctttgacatactattaacggctgataaagttgat
ggatccgctgagattatcgatattgcatttcacgtcaccagttccattgtagagacgggg
gaacgagcgtctgataactcagcccttattcgaattcctgtcgatgctcgagtcagtgtc
aagatgtacagcgattccatgcctacccatcagtccatcatatctgacgaggagtatgtt
tactatccgacctatcaacacgagttagaagtaggacgggaagtaacacatgtatatgcg
gtacaaaatttaggaccgagcgacatcagtgaagcagagctaacaatttactggccaatg
cattcgtattatggatatctcttatatcttgtgaacgttacactgagcacaggggagata
tgccatgtggataacgaactaaaccctatgaacttggaattaattcaacgtgagatatct
gcctacagcgaagtaaattttacggagcaaacgaattcaaccgcctctgattcagacccg
tatgagtccgtaacggagggatattacatagatataccgaccaacataactagaaataac
gtcaaaagaacggtagaaaagtcacaaacggcgagccatgacagagaaacaaggtacaga
gatttcatttgcaagagcggaaaggaggaatgttataccattagatgtcgactgacaaac
ctgattggatctaagaaaagaaacatagtgacggtacaactcaggtcgagactttggaat
gatacctttaaattgttacccggaaacgaatggagatttacgtcgaccgctgtattaaat
gtaacacatttaccgtacagtgttcaaccaaataactatcctacgatttatgcttcaaca
acgactgccgtcacaaaattagagtttaccgagcttccttcaaaagatccgccgttatgg
ataattatattttctatattctgtggtatattattattagcagctatcttaggaatatta
acaaagattggtttctttactagaagtagaaattttaagaaaatggaagaagaaaaggag
gaagttacaccagtggatttatag
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