Apostichopus japonicus (Japanese sea cucumber): 139958788
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Entry
139958788 CDS
T10891
Name
(RefSeq) integrin alpha-8-like isoform X1
KO
K06584
integrin alpha 8
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04512
ECM-receptor interaction
ajj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139958788
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139958788
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ajj04515
]
139958788
Cell adhesion molecules [BR:
ajj04515
]
Integrins
Integrin alpha subunits
139958788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_1
FG-GAP_2
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
139958788
NCBI-ProteinID:
XP_071812223
LinkDB
All DBs
Position
18:complement(13002589..13046050)
Genome browser
AA seq
1087 aa
AA seq
DB search
MAYLRDSQIIIWKYIMRILVIVCMLQDIIYGYNFDMKVPIVYRGEEGTYFGHSVAIHRDS
GQDMIIIGAPQADAQAENVVRGGAVYGCPVLPYNTTRTCQILPLDYGVSYVKKRNKSNEW
FGATVKSSGSPYDELLTCAPFSQKIQPRGIYRNGRCIISSQNFTKKKYINHPCRQNKYDL
NGRYDIKDCQAGMSADIFKGQYVLGAPMCPNTKGLFISNTTKLDEVARNNDYLGFSVAHG
KFIAPEVGRLQITSVVSGAPRQNNLFGKVIVYGRKREKIAHVTGTQMGSYFGHSVAVSDL
NNDGRDDLIVGAPRYWKKDTQQINVGQIHVYYQNTWGVLNDEGKSVITGHVTGGRFGFVV
AALGDINDDNFNDLAVSAPYDGDGAVYIFNGKREKIHTTPSQVLRPRDFGLNIRTFGYAL
SSNRDADQNQYPDLLVGAYESDTVILIRTRPIVRPDVTIVTQPRALYLSRPGASDTKPIS
FNFTTCLSYRGIGTADQYSFTSVLVLDALKVKSRARLFNSKGPVKHEENINITKNSPLCD
TWTAVLKDFDRIQDRSSPIAIRMSLSLLEDEDALDYGELSTLMETPGEHWETRIPLFYEC
VNNETCATDLVLSVESDTEKMYMGAADQVTLNVTIENRADDAFESYLYVHIPTAFQFYSF
KAIRSHSCMHADVGFLCIQELSIQCTAASVHTTIVCNVGNPLPAETKISFSLSFSAVKVP
GDEEAVLFNLNVSSLTREEPDTLYDNNYNISIPLELEINTELVGNSNIGTVIYKESDSKS
LNKPIAHEKDVGREIIHKYRVENLGPADIEIGTLEVEWPIRTANGEHLLYIMEVDITNGY
QCDVIGDSINPENFTLSVLSTSDYTSEGLSLPPSTEPSRRRRDTGSGSRSDAQLLPQPTQ
KPLDDVPYEANCVNNYRGCVTIRCNITDFTSGHEHSTLLTIRSRLWSMNIQNEESRSWKI
RSSATFRVDKVPYIFQPEELHEQTSTLSLLATPSTRKLVLVIPMWSIILSVVVGHLVIII
IIIILWKVGFFKRKRMDLQRYTGTSLEDENDDMKEEEEEEVVHAENGSRKQKKMNIVHLN
LANSRIE
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcttcgtgactctcaaattataatctggaaatatatcatgagaatattagta
atagtttgtatgctacaagacattatatacggatataattttgacatgaaggtaccaata
gtctaccgcggtgaagagggcacgtacttcggtcattcggtagctatacatcgagacagc
gggcaagatatgataatcattggtgcaccacaagccgatgctcaagcagaaaacgtagta
agaggcggagctgtctacggatgtccagtactgccgtacaatacaacaagaacatgtcag
atacttccattagattatggcgtcagttatgtaaagaagaggaacaaatccaacgaatgg
tttggggcaaccgttaaaagttctggaagcccatacgatgaacttttgacttgcgctccg
tttagtcagaaaattcaacctcgagggatctatagaaacggtagatgtattattagttct
caaaatttcacgaagaaaaaatacatcaaccacccgtgtagacagaataaatatgaccta
aatgggcgttatgacattaaggattgtcaagctggtatgagtgcagatatctttaagggt
caatacgtacttggtgcgccgatgtgtccaaatactaagggtctgtttatttccaatacc
accaaacttgacgaggttgccaggaataacgactatttgggtttctctgttgctcacgga
aaattcattgcgccagaagtaggaaggctccaaattacatccgtagtttctggagctccg
agacagaataacctattcggcaaggtcatcgtttatgggagaaagagagaaaaaattgca
cacgtgacaggtacgcagatgggtagttactttggacacagtgtggcggtcagtgatctt
aacaacgatggtcgagatgatcttatcgttggtgctcctcgttattggaaaaaagatact
caacagataaatgtcggccaaatacacgtgtattaccagaatacgtggggggtgttgaat
gacgagggtaagtccgttatcactggtcacgtgacaggaggtcgctttggatttgtggtt
gcagcacttggagacattaatgatgataacttcaatgatttggcagtcagtgcgccatat
gatggcgatggcgctgtttacattttcaacggtaaaagggagaagattcacacgacaccc
agtcaggttcttcgtccacgtgacttcggtctgaatatcagaacgtttggttacgccctc
tcgagcaacagagacgcagatcagaatcaataccctgatttactggttggagcgtacgaa
tcggacacagtaattttaataagaaccagaccaattgtccggccagatgtaacaatcgtg
actcaaccaagagctctttatctctcaagaccaggtgcaagcgatactaaaccaatcagt
ttcaattttacgacgtgtctgtcttataggggcattggtacagcggaccagtactccttc
acatcggtcttggtacttgacgccttaaaagtgaaatcgcgtgcgagacttttcaactcg
aaaggaccggtaaaacacgaagaaaacattaatattacgaaaaattcgccactgtgtgac
acatggaccgcagttctaaaggactttgacagaattcaagatagatcatctccgatagct
ataaggatgtcgctatcgttactagaagatgaagatgctcttgactatggagaactaagc
acactaatggaaacacctggtgaacactgggaaactcgaattccgttgttttacgaatgt
gtaaacaatgaaacctgtgccactgaccttgtactatcagtagaaagtgacacggaaaaa
atgtatatgggtgccgcagatcaggtgaccctcaacgtgaccatagagaacagagctgac
gacgcattcgaatcgtatctttacgtacacattccaactgcatttcagttttactccttt
aaagccattcgttcgcattcatgcatgcatgctgacgttggttttctttgtattcaggag
ctttctatccaatgtactgcagcttctgtgcacacgacgatagtttgtaatgttggcaat
ccgctccctgctgaaacgaaaatatcattttccttgagcttttccgccgtaaaagtgccc
ggtgacgaggaagcagtattgtttaaccttaacgtcagcagtttaacccgcgaggaacct
gatacgttgtatgataacaattacaacatcagcataccattggaacttgaaataaatacg
gaattggttggaaattcgaacatcggtacagtgatttacaaagaaagcgactctaaaagc
ttgaataaaccgattgctcatgagaaagacgtaggaagagaaatcattcacaaatatcgg
gtggagaatctcggacccgccgacatagagatcggtaccttggaagtggaatggccaata
agaacagccaatggggaacatctattgtatataatggaagtggatatcactaatggttac
cagtgtgacgtcattggggactccataaatccagaaaattttacgttgagtgttctatca
acctctgactatactagcgagggtctgtcgttaccaccatcaactgaaccctcccgacgt
cgaagggacactggatcagggtccagaagtgatgcacagttgttacctcaaccaactcaa
aagccgttagatgatgtaccgtatgaggcaaactgtgtgaacaactaccgtggctgtgtc
acaattcgctgtaatattactgactttactagtggccacgaacacagcacattactaaca
atccgatcgaggctttggtcaatgaatatccaaaatgaagaatccagatcgtggaaaatc
cgatcaagtgcgaccttccgagtagataaagtaccatatatctttcagccggaagagctt
catgaacaaacttcaacactttcgttgttagccacgcctagtacaaggaaacttgtgctt
gttataccgatgtggtctattattttgtccgttgtcgtgggacaccttgttattataatc
ataatcatcatcttatggaaggttggattctttaagaggaagaggatggatctgcagcgg
tatacagggacgtccctggaggatgaaaatgatgatatgaaagaagaagaggaagaagaa
gtagtacatgctgaaaatggttccagaaagcaaaagaaaatgaatattgtccacttaaac
cttgcaaacagtagaatcgaataa
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integrated database retrieval system
