Apostichopus japonicus (Japanese sea cucumber): 139958791
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Entry
139958791 CDS
T10891
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04145
Phagosome
ajj04512
ECM-receptor interaction
ajj04820
Cytoskeleton in muscle cells
ajj05100
Bacterial invasion of epithelial cells
Brite
Membrane trafficking [BR:
ajj04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
139958791
Exosome [BR:
ajj04147
]
Exosomal proteins
Proteins found in most exosomes
139958791
Cell adhesion molecules [BR:
ajj04515
]
Integrins
Integrin beta subunits
139958791
CD molecules [BR:
ajj04090
]
Proteins
139958791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139958791
NCBI-ProteinID:
XP_071812227
LinkDB
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Position
18:1646840..1687711
Genome browser
AA seq
806 aa
AA seq
DB search
MDCKHSIFLLLLLYCARSIYAQNLGEVVVFEIMQEDIFTQENKTASPCNDAKTCGACIVL
DPSCGWCTQGNFTDTGSPRCDTIPNLRMQGCSEYTSPNSSYTIDLDKELSNAGNTTNLGE
AVQVKPQEITLKLRPGQPTQFTFQVRQAEDYPVDLYYVMDLSKSMEDDLVNLRKVGDILA
EEMSQITSDFRMGFGSFVDKVVMPYVSTVPAKLAEPCSGCQAPYGFKNELSLTGDTSEFS
RTINQLQVSGNLDAPEGGMDALMQVTVCKEAIGWRDMARHLVIFTTDASFHYAGDGKLGG
IVKPNDGNCYTTALDNTYTMSSELDYPSISQLNAAMRDNSIIPIFAVTQSEFSVYQNLTE
YIEGAQAAVLAADSRNIVEIVKNNYAAITSKVEVVDTAPEDVLVEYTAICLDGVRRPGTQ
VCEGLTLGDTVSFDVTVTGNTCPDSRTSSFTIRPVGFSEELQVNIDYLCDCDCEGSGIPN
SPDCSDGAGTLECGACDCNAGHYGRNCECSSDGPTLEDSDKLCKAGNSTIICSGRGSCVC
GDCVCFPRPNPEEVVKGTFCECDNFSCDRHRGQLCGGEEHGTCVCDEASRKSKCQCKAGW
SGPSCACSTTTDTCIAANGETCNGYGECVCGACICNANSSYSGAKCEECRACPGKCQANK
DCVECKAFGTGLTREQCDKCPYKVIPITGDLQIPNGSERCLVPDNDGCSFIFTYEQFSND
TFVLYVLAEKSCPEPINPLVVIIPIVIGIILIGLLLLILWRVLIYLWDRKEYKQFEKDRA
NAKWEMGENPIYKPSTTIHKNPMYGK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggattgtaaacattcaatattcttattactgttactgtactgtgcgaggtctatatat
gcccagaacctaggtgaagtagtggtcttcgagattatgcaggaagatatatttacacaa
gaaaacaagactgctagcccttgcaatgatgccaagacatgtggggcctgtatcgtgttg
gacccgtcctgtggctggtgcacacaaggaaacttcacagataccggcagtcctagatgt
gacaccattccaaatctccgtatgcaaggatgcagtgaatatacaagtcctaatagttct
tatacgattgatttggacaaagaattgagtaatgcaggaaacacaaccaatttaggtgaa
gctgtacaagtgaaaccacaggaaataactctcaaattgagaccaggtcaacctactcag
tttacatttcaagtgaggcaggcagaagattaccctgttgatctttactacgtcatggat
ctttccaaatcgatggaggatgatttggtcaatttgcggaaagttggagatattcttgct
gaagagatgagtcaaatcacaagtgactttcgaatgggttttggatcgttcgtggacaag
gtggtgatgccatatgtcagcaccgtaccggccaagctagcagaaccttgcagtggttgt
caggctccatatggctttaagaacgaactcagtctgactggggatacaagtgaattctct
agaacaattaaccagctgcaagtctctggaaatctcgatgcccctgaagggggcatggat
gcccttatgcaagttacagtatgcaaggaggcgattggttggagggacatggcgagacat
ttagttatcttcaccaccgatgcgtccttccattatgcgggagatggcaagcttggtggt
atcgttaaacctaacgatggaaactgttacaccacagcccttgacaatacgtacaccatg
tcaagtgaattggactatccttcgattagtcaactgaatgctgccatgagagataacagc
atcattccaatttttgctgtgacacagtctgaattttcagtttatcagaatcttacggaa
tacattgagggcgctcaagcggccgtgttggcggcagattctcgaaatattgtggaaatt
gtgaagaataattacgcagcaatcaccagtaaagttgaagtggtggatacagcaccagag
gacgtacttgtggaatacactgctatctgcttggacggtgttcggcggcctggtacacaa
gtatgtgaaggattgacccttggagacactgtcagctttgatgtcacggtaacaggcaat
acctgccctgatagtagaacctccagtttcaccattcgtcctgttggcttcagcgaggag
cttcaggtcaacattgattacttgtgtgattgtgactgtgaaggttcggggattccaaac
agcccagattgctctgatggggctggtactctggagtgcggggcctgcgattgcaacgct
ggacattacggacgtaactgtgaatgcagctctgatggcccaacactggaggacagcgat
aagctatgtaaagcaggaaattctaccatcatctgttcaggacgaggatcttgtgtctgt
ggtgattgtgtttgcttccctagaccgaatccagaggaagtggtgaagggaactttctgc
gaatgcgataatttttcttgtgataggcacagaggtcaactctgtggaggtgaagaacac
ggcacctgtgtctgtgatgaggcatcgaggaagagtaaatgtcagtgtaaggccgggtgg
tctggaccttcttgtgcctgctcaactacgacagacacttgcatagctgctaatggggaa
acatgcaatggttacggagagtgcgtctgtggtgcttgtatttgtaacgccaattcaagc
tacagtggtgccaaatgtgaagaatgcagggcatgtccaggaaaatgccaagccaacaaa
gactgtgtggaatgtaaagcatttggaactggcttgaccagagaacagtgtgacaagtgc
ccatataaggtcatccccatcaccggcgacctacagattccaaatggttcggaacgttgt
ctggttcctgacaacgatggctgttctttcattttcacctatgaacagtttagcaacgat
acatttgtcctctacgtacttgcagaaaagagctgtccagagccgatcaatcctctcgta
gtcatcattcccatcgtgatcggtatcattctcatcggattactcttgcttattctctgg
cgtgtcctgatttatctatgggacaggaaggaatacaaacaatttgaaaaggatagggca
aatgctaaatgggaaatgggtgaaaatccaatatacaagccatcgaccacaatccacaaa
aacccaatgtatggaaagtaa
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