Apostichopus japonicus (Japanese sea cucumber): 139958875
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Entry
139958875 CDS
T10891
Name
(RefSeq) low-density lipoprotein receptor-related protein 12-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ajj04131
]
139958875
Membrane trafficking [BR:
ajj04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
139958875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
139958875
NCBI-ProteinID:
XP_071812385
LinkDB
All DBs
Position
3:744356..765625
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AA seq
811 aa
AA seq
DB search
MFVKKLLSVDYAMYSVFQGILFLYLMCQCHGILKCGDGQLSEPSGYISSPGFPNLITASG
NCKWKIHLGTTDFLTISFETFDFASTSTHSRLAIYPSLGVNDRTGYSVSDPPTSPYFSAS
HGSTIVISLTLEASDVGSKFNLTYIRGPKDLLQSCPSHQFKCSNGKCILPSWVCNGENEC
EDGSDEAQCSVPSPTPHEGSCPNQHFACTSSSTGHMTCFQEIRKCDGHQDCENGDDEESC
ASVCHYLLEGTVGSFSSPNYPGNYYSDLDCEWRISLGQEGIVQLRFVQFDLESGFYRDYV
KVFEDYIQPSTGAYVRREIDTYYGSMQDVYSPPTVVEASGSSLVVQFHTDNNINRGGFNA
TFQKKGYCIDHQKSCGEDDNNCYDVDREMCDGRYACQRGQDEVGCGNCSAEKIPCQGSGR
DCFLPEDRCNGFTTCSPGGEDEQFCTAEICGEAHGLFLCKDGTCIQEKWMCDVQVDCEDG
SDESDCPSTVKVITAAVIGSLVCGMLLVAALSCTCKLYQLRQVRRDGGQSPSRSSYYIYG
GENDQREAPPSYSATMASPHYGDLQRAFVEGVRGGTTVSHGINRRRSRFLRMLSRGSQGE
LNAAATPEAASNRNTPEGGSLEQETHDIQNSVNVEGRSSESSDPQNTLETSSFTTSDTDS
ETTQEVVQQAHLDHQILNAAANIHRIRVVNRILQRQATSRRSPDHPPSSEGPTTSSSSTP
DTSVDGTSGGSSSLAVTPELSSTSQDHAGHGHQGTPDRGEITLPSSSAAAAAAVFVTPDE
DEFPREHDPAIIVGVHNPEENRDDVQLLDDV
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtaaagaaacttctctcagtggactacgccatgtattctgtttttcaaggtatt
ctctttctatatctcatgtgccagtgtcatggaattcttaaatgtggcgatggccaatta
agtgaaccctcaggctacatctccagtccaggctttcccaatcttatcacagcatctgga
aactgcaagtggaaaatacatcttggaacaacagatttcttaaccatcagttttgagact
ttcgactttgcaagtacttcaacgcattccagattagcaatctatccatcccttggtgtc
aatgataggacagggtactccgtatctgacccaccaacgtcaccctattttagtgcctca
catggttccactattgtcatctctctgacactggaagcgtctgatgttggttccaaattt
aacttgacctatattagaggaccaaaggatctgttacagagctgtcccagccaccagttt
aagtgtagcaatggcaaatgcatactacccagctgggtgtgtaatggagaaaacgaatgt
gaagacggctctgacgaggcccagtgcagtgtaccttctccaacccctcatgaagggtcc
tgtcccaaccaacattttgcttgcacatcctcatccaccgggcacatgacttgtttccaa
gaaatacggaaatgtgacggccaccaggactgcgaaaatggagacgatgaggagagttgt
gcatccgtttgccattatctcctggaaggtacagtcggttcattttcctctccgaactat
ccggggaattactacagtgacctggactgtgagtggaggatttcgctagggcaagagggc
attgtgcaactgaggtttgttcaatttgatctggagtccggcttctacagagactatgta
aaggtttttgaagactatatccaaccatcgactggagcctacgtccggcgtgagattgac
acctactacggctcaatgcaggacgtttacagtccacctacagtagtggaagcatctggt
agttcattggtcgttcagttccatacggacaacaacattaaccggggagggttcaacgct
actttccaaaagaaaggatactgtattgatcatcagaagagttgtggtgaggatgacaac
aactgttatgatgtggacagggagatgtgtgatggtcgctatgcctgtcaaagaggccag
gatgaagtagggtgtggtaactgttctgcagagaagataccctgtcagggatcaggtagg
gactgcttcctccctgaagacagatgtaatgggttcaccacatgcagtcctggaggtgaa
gacgaacagttctgcaccgctgaaatctgtggagaggctcatggtctatttctttgtaaa
gatggtacttgtattcaagagaaatggatgtgtgacgttcaggtcgactgtgaagatgga
tccgacgagtcagattgtccatctactgtcaaagtaatcacagctgccgtgattggttcg
ttggtgtgcgggatgctcctcgttgctgccctcagttgtacatgcaagttgtaccagctc
cgtcaggtccgcagagacggaggacagtcaccatccagatcgtcctactacatctacggg
ggagaaaatgaccagagggaagcacccccgtcctactcagccactatggcatctcctcat
tatggagaccttcagagggcattcgtggaaggagtaaggggaggcacgactgtatcccat
gggatcaacagacgaaggtcccgctttctcagaatgctctctcgtggcagtcaaggagaa
ttgaatgcagccgctaccccagaggcagcctcgaatagaaacactccagagggtgggtct
ctcgaacaagaaactcatgacatacaaaactcagtcaacgtagagggtagatcctcagaa
agttccgacccacagaataccctggagacatccagcttcaccacatcggacacagactcg
gaaactacccaagaggtggttcaacaagcacaccttgaccaccaaatactgaatgcagct
gcaaacatccacaggattagagtagttaacaggatacttcagcggcaagcaacaagcaga
agatctcctgaccaccccccctcatctgagggtcctaccacatcatcaagtagcacccct
gacacatcagtggatggtacatcgggtgggtcctcatcattggcagtcacaccagagctt
tcatcaacatcccaagaccatgctggacatggtcatcagggcactccagacagaggggag
ataactctaccatcatcatcagcagcagcagcagcagcggtcttcgtcacccctgatgaa
gatgagtttcctagagagcacgatcctgccatcatcgttggtgtgcataatccagaggaa
aatagggatgatgtacaactactagatgacgtatga
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