Apostichopus japonicus (Japanese sea cucumber): 139958877
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Entry
139958877 CDS
T10891
Name
(RefSeq) polycomb complex protein BMI-1-like isoform X1
KO
K11459
polycomb group RING finger protein 4
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139958877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ajj03036
]
139958877
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
139958877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_6
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-C3HC4_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
139958877
NCBI-ProteinID:
XP_071812386
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All DBs
Position
18:12284481..12313459
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AA seq
382 aa
AA seq
DB search
MHRKTRIKMTDLNPLLTCKLCKGYLIDATTLTECLHSFCRSCLVRYLCTSIQCPTCDTPI
HKTRPLLNARVDRDLQNVVYKLTPGLFKDEMKKRRDFYSEHPIAVNSTTTNMEDRGEVSE
QPGVIYSDDETMTLSLEYYVPSRQQSAKWSNDGNRTDSGNYGDGQTGSESDKNEIIDKRY
LRCPAAVCVKHIKKFIRNKFNLKPSYEIEVTHFDDEDDSLPDDYTLMDVAYIYAWHKSGP
LPLFFRIFHTIKRQKTSHETLDGCKMAQDSYHHSSDLPTSEEEPPRLKKEPQCVLKKDEE
RKDDRVDYCVTFDPSKRSDDDDKESATGRDMKVEDEFVKEKRKGGNNEMMKGDGVDYHRE
ELEPSDKEALETPPTLTRIETT
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggaagactcgtattaaaatgactgacctgaatccactgttgacgtgtaaacta
tgtaaaggttatcttatagacgctaccacactaacagaatgccttcactcgttttgtcga
agctgccttgtccgttacctatgtaccagtatacagtgtccaacttgtgatactccgata
cacaagacaagacctttgctgaatgcaagagtcgatagagaccttcagaatgtagtatac
aagctgacaccaggactcttcaaagatgaaatgaagaaaagaagagacttttattccgaa
catccgatagcagttaatagtactacaacaaatatggaagatcgaggtgaagttagcgag
caacctggtgtcatttattcggacgatgaaactatgacgttatctctagagtactacgta
cctagccgtcagcagtctgccaagtggtcaaacgatgggaatcgaacagattccggtaac
tatggtgatggtcaaacaggaagtgaaagtgacaagaatgagatcattgataaacgctac
ttaagatgtcctgctgccgtctgtgtgaaacacataaaaaagtttatccgaaataagttc
aacctgaagccaagttacgagattgaagttactcattttgacgacgaagacgacagtttg
cctgatgattacacattaatggatgttgcttacatttatgcctggcacaagagtggcccc
ttaccgctattctttcgtatattccacacaattaaaagacaaaagacgtctcatgagacc
ttagacggatgtaagatggcgcaggattcatatcatcattcttcagatctcccgacatca
gaggaagaaccgcctcgtttaaagaaagaaccgcagtgtgttctgaaaaaggacgaggaa
cgaaaagatgatagagtggactactgtgtgacctttgacccttcaaaacgaagtgacgat
gacgataaggaatctgcaacaggaagagatatgaaagtagaggatgagtttgtaaaagag
aaacggaaaggaggcaataatgaaatgatgaagggagatggtgttgattatcatagagag
gagctggaaccctcggacaaggaagcattagagactccgcccacattgacacgtatagag
accacgtga
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