Apostichopus japonicus (Japanese sea cucumber): 139959024
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Entry
139959024 CDS
T10891
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139959024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajj03041
]
139959024
Spliceosome [BR:
ajj03041
]
Complex A
U1 snRNP components
U1 related factors
139959024
Complex B
139959024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Glyco_hyd_101C
WW_2
Motif
Other DBs
NCBI-GeneID:
139959024
NCBI-ProteinID:
XP_071812639
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All DBs
Position
18:20006996..20039550
Genome browser
AA seq
1053 aa
AA seq
DB search
MLIVGYRSQLTAFAWCTSYKSYEIFWQVFRKHFKMNNQQGPGPRPPGPPGMNQGGGYGQP
QNPMMMPPFGHAGMPPPFPMGMPNNQGLPPGQRPPMGPNDNNGPQGGMNMPPPNFSQPPM
GLPLPPPPMPGLGMPPPGFGPPGMGGPPPMGMPPNLPHGMFPPMMPPMNPGTLPPPLAGA
PPAVTGEILPVEKLQPAIPPDNKAVKAVDAAGDKGQADEKTTNGETKREKKSKKSPWTRH
KAPDGRFYYYNSVTKQSTWEKPESLKSKAEMMLSKCPWKEYKSDNGKLYYHNSQTKESKW
TIPEELKKLKDMIASKEFEDSDEESEAEEEEEDGKAEEKDKEGLKKLETSKSSETIEDSA
KVRNEASSGNKQEETDAISHQESVAASAAAQVTAIMLGKQSGGEGQQEVQSEDGDGTPGG
VAQAAQTNTDSPAAPISTPAAAAAAAAEEEQKSDDEVHSVHDESRETTPEPKILTWNTKE
EAKDAFKQLLREKEISTTSSWEQAFKLIVNDVRYTALPKLSEKKQVFNNWKTSRAKEIKD
EIRIKAKKAKEDLAKFLENHPKMNAHVRYRKADVMFEDKDVWNAVPSPDRKDVFEDCIFF
LAKREKEESKALRKRNIEAMHNILNSMPNVSFKTTWSECQRHLAENPTFTDDEELLSMDK
EDALICFEDHIRELEKQEDEERERKRILQKRQYRKCREAFVVLLDELHERGQLNSMSQWM
QLFPIINSDSRFHDMLGNPGSTPLDLFKFYVEDLKARYHDEKKIIKEILKDKGMVVELDT
MYDDFATTISEDKRASTLDAGNIKMAFNSLLDKAEGRKKEREKEQARQLRRLESAFKSML
KNAAPPIDVNSKWEDVKDQFVNDTIYLSIAPDSERIRLFNEYIASLEEACAHHHAKVSSK
KNKKTKKHRRRSRSRSRTPASESEDDKDHSSHKRSKKKKRSRTPSLESSEEEPEPAVKSS
SSSRSSKRHKKKAKRKRKQTPTSSSASDAERDKEQDRESGELSERQLQKPATPARSSPPK
KEKTAWDTSDSDLSEGELREKKKILLEQLKDSD
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgttgattgtcggctaccgtagtcaacttacagccttcgcgtggtgtaccagttacaaa
tcctacgagattttctggcaggttttcaggaagcatttcaaaatgaataatcaacaaggc
cctggccctagacctccaggacccccagggatgaaccaaggtggaggttatggccagcca
caaaatccgatgatgatgccaccatttgggcatgcaggcatgcctccaccatttccaatg
gggatgcctaataaccagggtcttccgcctgggcagaggcctcccatgggtccaaatgat
aacaatggacctcaaggaggcatgaacatgccaccaccaaacttttcacaaccaccaatg
gggttgcctttacccccaccaccgatgccaggattagggatgccgcctcctggttttgga
cctccaggaatgggtgggcctccacccatggggatgcccccaaatctacctcatggcatg
tttccaccaatgatgcctcccatgaaccccggaactttaccacctccactggcaggggca
cctccagcagtgactggagaaatactaccagtggaaaagcttcaaccagccatcccacca
gacaataaggctgtcaaagcagttgatgctgctggagataaagggcaggcagatgagaag
actaccaatggagaaaccaaaagagaaaagaaaagcaagaaatctccttggacccgccat
aaagcaccagatggtaggttttactactacaactctgtcacgaagcagtcaacctgggaa
aaaccagagagtctcaagagtaaggcagagatgatgctctccaagtgtccatggaaggag
tacaagtctgacaatggcaaactctactatcataactcacagaccaaggaatcaaaatgg
accattccagaagagttgaaaaagttgaaggacatgattgcaagcaaagaatttgaagac
agtgatgaagaatcagaagcagaagaggaggaggaggatggcaaagcagaggaaaaggat
aaagaaggattgaagaaacttgagacgagcaagtcatcagagactatagaggatagtgcc
aaggtcagaaatgaagccagcagtggaaacaagcaggaggagactgatgccatcagtcac
caagaatcagtagcagcttcagctgccgcccaagtgacagcaatcatgcttggcaagcag
tcagggggtgaaggtcaacaagaggttcagagtgaggatggagatgggacaccaggtggt
gtggcccaggcagctcaaacaaacaccgacagcccagctgcccccatcagtactcctgct
gctgctgctgctgctgctgctgaggaagaacagaaatcagatgatgaggtccacagtgtt
catgatgaatctcgtgaaacaacccctgaaccaaagatcctgacttggaacacaaaagaa
gaagctaaggatgcttttaagcagcttctcagagaaaaggaaatttctactacaagcagc
tgggaacaagcttttaagctcattgttaatgatgtgagatatacggctctaccaaagttg
agtgagaagaagcaagtgtttaataattggaaaacatcaagagctaaagaaattaaagat
gaaattagaattaaagctaagaaagctaaagaagatttggccaaatttctggagaatcac
cctaagatgaatgctcatgttagatacagaaaagcagatgtgatgtttgaggataaagac
gtgtggaacgcagtcccatctccagaccgcaaagatgtctttgaagactgcatcttcttc
ttggccaaacgagagaaagaagagagtaaagcacttcgcaagaggaacatcgaagccatg
cacaatatccttaatagcatgcctaatgtcagcttcaaaacaacttggtcagagtgtcag
agacaccttgcagagaaccctaccttcacagatgatgaagaactcctaagtatggacaaa
gaggatgccctcatctgtttcgaggatcacattagagagttagagaagcaggaggatgaa
gaaagagagaggaaacgaatccttcaaaagaggcaatacaggaaatgtagagaggctttt
gtagtactactagatgaattgcatgagagaggtcagttgaactctatgtcacaatggatg
cagttattccctatcattaactctgactcacgattccatgatatgttgggaaaccctgga
agtacaccattagacctattcaagttttatgttgaagatctcaaagctcgttaccatgat
gaaaagaagatcattaaagaaatactcaaggataaaggaatggtggtggagcttgacacc
atgtatgatgactttgccacaacaatcagtgaagacaaacgagccagcactctcgatgca
ggcaatatcaagatggcatttaactctctgttagataaagctgaagggaggaagaaagag
agagagaaggaacaagccagacaactgcgaagactggagagcgcatttaagagtatgttg
aagaatgcagcgccacctattgatgttaattcaaagtgggaagatgtaaaggatcagttt
gtaaatgacaccatctacctctcaattgcacctgattcagaaaggatacgtctcttcaat
gagtacattgcatctctagaggaagcttgtgcccatcaccatgctaaagtatcgtccaag
aagaataaaaagaccaagaaacatcggcgtagatccagatctaggtcaaggacgcctgcc
tcagaatcagaagatgataaagatcattcctctcacaaacgatcaaagaagaaaaagagg
tctcgaacccccagcttggaatcatctgaggaggagccggaacctgctgtcaagagcagc
agcagtagtagatcatcaaagcgacacaagaagaaagccaagaggaaacggaaacaaaca
cccaccagtagctcagcatcagacgcagaacgagacaaagaacaagaccgtgagagtgga
gaactttcagaaagacagttacaaaagccagccactcctgctcgcagttcacctccaaag
aaagaaaagacagcatgggacacgtcagatagcgacctgagcgagggtgaactccgtgaa
aagaaaaagatattgctggaacaattaaaagacagtgactag
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integrated database retrieval system
