Apostichopus japonicus (Japanese sea cucumber): 139959057
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Entry
139959057 CDS
T10891
Name
(RefSeq) CCR4-NOT transcription complex subunit 9 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139959057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139959057
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139959057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
139959057
NCBI-ProteinID:
XP_071812702
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All DBs
Position
18:18023994..18034271
Genome browser
AA seq
313 aa
AA seq
DB search
MNSLGMSQVQRVTTITNMPATTPAPPAIPQVEREKIYQWIIELASPDTRENALLELSKKR
EVVPDLAPMLWHSFGTVAALLQEIVNIYPYINPPALTAHQSNRVCNALALLQCVASHPET
RSAFLQAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPL
CLRIMESGSELSKTVATFILQKILLDETGLSYICQTYERFSHVAMILGKMVLALAKEPSA
RLLKHVVRCYLRLSDNQRARGALRQCLPDQLKDTTFANVLKDDNSTKRWLAQLIKNLSEA
PIQDQPGIPHPPQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaattctttgggaatgtcccaggtacagagagtaacaactatcactaatatgccagcc
acaacaccagctcctccagccatccctcaggtagaaagagagaaaatatatcagtggatc
attgagcttgccagtccagacaccagagaaaatgctcttctggaactaagtaaaaagaga
gaagtcgtcccagacttggcacccatgttgtggcattcttttgggacagtggctgccctt
cttcaagaaatagtcaatatttatccatacattaacccaccagcattaactgcacatcaa
tcaaaccgagtttgcaatgccttggcattactccagtgtgtggcttctcacccagaaaca
cgctcggcattcctacaagcacatataccactgttcctataccctttcttacataccgtc
agcaaaacaaggccttttgagtatctgcggttgactagtctgggtgtcattggtgcccta
gtcaagaccgacgaacaagaagtcatcaatttcttgctgaccacagagattatccccctg
tgcctacggataatggagagtggcagcgaattatcaaaaactgtggcaacatttattctt
caaaaaatacttttggatgagaccgggttgtcctacatttgccagacttatgaaagattc
tcacacgttgccatgatactgggtaaaatggttttagcattggccaaagaaccatctgct
aggcttctgaagcatgttgtaaggtgttacctcagattgtcagataaccaaagagctcgt
ggtgccttaaggcaatgtttaccggatcagttgaaagatacgacttttgctaacgtcctg
aaagatgacaattccactaagagatggttagcacagctcattaagaacctcagcgaggca
ccgattcaagaccagccaggaattccacatccccctcaatga
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