Apostichopus japonicus (Japanese sea cucumber): 139959182
Help
Entry
139959182 CDS
T10891
Name
(RefSeq) integrin alpha-6-like isoform X1
KO
K06485
integrin alpha 6
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04382
Cornified envelope formation
ajj04512
ECM-receptor interaction
ajj04518
Integrin signaling
ajj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139959182
04518 Integrin signaling
139959182
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139959182
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139959182
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ajj04147
]
139959182
04515 Cell adhesion molecules [BR:
ajj04515
]
139959182
04090 CD molecules [BR:
ajj04090
]
139959182
Exosome [BR:
ajj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139959182
Exosomal proteins of breast milk
139959182
Cell adhesion molecules [BR:
ajj04515
]
Integrins
Integrin alpha subunits
139959182
CD molecules [BR:
ajj04090
]
Proteins
139959182
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
139959182
NCBI-ProteinID:
XP_071812881
LinkDB
All DBs
Position
18:complement(6869407..6920459)
Genome browser
AA seq
1144 aa
AA seq
DB search
MDSIGYKTILLYFLSFFIKRTLQFNFETRLPLIKNGPPDSYFGFSVAQHSTAERGVRPPF
AESLFLVGAPIFSDDNLPFNNTGGVFRCPLTTSFDDCTQIEVEGVGEEEESKDKNGEWLG
VTVRSQGPGGKVATCAHRYKQVVRTDGVISSINPIGRCFLLESDLTIEEAYKDGWAPCSG
KTGGPDAFGYCQAGTGLAITKKERGDSGADFIIGAPGAGNWQGSMVVTNPKFHLWWSEIT
QESVRVDLNSYFGFSATSGKFVEDRTTFVVGGAPRADAKGAVVIMKKQEEWGERELVFVD
MLVSTSAYSSFGYDVTVADLNGDGYDDIIVGAPMFFDRETQVGGAVYVFINEAYDGTFSG
VDPIIITGPLDSRFGMSVTGLGDINWDGFEDFAVGAPYENDAQGAVYVYLGSASDGVVQP
WAQKITPSDFPANLHNAMLPNNTFGYSLSGGMDLDWNAFPDLLIGALDSESVVLLRGRPV
INMTATVTVSPSQLDRERLDCNVGGEQKLCFTITVCAQYFTASKFDEQLDVIFEVEAEAK
RRSLGLNSRVYFEGADPDHILSNQRLSMNYKTDEREACYPPIQAILRDDFSDIYRPIPLR
VTFSLPEEEPELPPPGEAIPDMKGTVMFDTTVVTTLATECDEDLDDPTTCIPIPNVKKVE
FTKECAEDDGECITDLVVDAEFKDLTEVSKGGNPLMKVGIDNDLKLSVNIENKAEHAYDA
NLMVEYSNHLEYAGLEEGASERVRFSCGDPVAKEDKNDTMVITCFLGNPYPPVPAKDNMV
MRFDANRVPADVMTLSFFIEATMTNEDLSPEDNEKSLIVDVESVTDVQLDGAVTKSQLFF
GGVIRGESIISKEEEIGPLMQQRWTVFNQGPAMVDEVKVTIDFPYEVTNGKWLLYMLEAP
VVEKGNGSCEIDESYLNVVGIKPCKSNCSEKAIGQKRETYDPVEYSNPDQVDSGSVVVLD
CENGTARCFKFTCILRDLTAEQNENEAIILIKARLWNATFMEDYLTAKKVTVRIHGYVEM
ANNSIITQTNTNNDRDTTNFDVVGPNLYISGGGISWWIILVAVLLGLLLLILLIVILWKI
GFFRRPSIGGSGGPFGFFERKTGYKYATVTQKNAETKVGTEKRQMYDEMYNYSPVPGENQ
PHQL
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggattccataggctataaaacaattttattgtattttctctcgttttttataaaaaga
acgctacagtttaactttgaaaccaggttgccacttataaagaatggtccacctgatagc
tattttggattttccgtagcgcaacacagcacagcagagaggggtgtaaggcctccgttc
gctgaaagtctattcttagttggtgctcctatattcagtgatgacaatcttccattcaat
aacacagggggtgtcttccggtgtcccttgaccacctcatttgatgactgtacacagatc
gaagtggaaggtgttggggaagaagaagagtcaaaggacaagaacggagaatggctgggt
gtgacagtaagaagccaaggccctggtggaaaagtagctacgtgtgctcacaggtataag
caggtcgtgagaacggacggtgtcatcagcagtatcaaccccatcggtagatgcttccta
ttggaaagtgatctcaccatcgaagaggcatacaaagacggatgggccccttgcagcggc
aaaacaggcggacctgacgcgttcggttactgtcaagcagggaccggtctagctatcact
aaaaaagagaggggagattccggtgctgattttatcatcggtgccccaggagctggaaat
tggcaaggatctatggtcgtcacaaatcccaaatttcacttatggtggtctgaaatcacg
caggaatctgtccgggtcgacctgaacagttactttggattttcggccacctctggaaaa
tttgtcgaggacaggacgaccttcgttgtcggaggggctccgagggcagatgctaagggt
gccgtggtcatcatgaaaaaacaagaagaatggggggagagagaattggtgttcgtcgat
atgctggtctctacctctgcatattcatcatttggttacgatgtcactgtggccgatttg
aatggcgacgggtatgatgacatcatcgttggagcgccaatgttctttgatcgagaaaca
caagtcggtggcgctgtttacgtgttcatcaacgaagcttatgatggtaccttctctgga
gtggacccaatcatcatcactgggcctcttgactcaagattcggtatgtctgtcaccggt
ctgggagatatcaactgggacggtttcgaagattttgctgtcggtgctccttatgagaac
gatgcacagggtgcggtctatgtctacctgggctccgcatcagatggagtagtccaacct
tgggctcagaagatcaccccttcagattttcccgccaatctccataatgcgatgcttccg
aacaacacttttggatattcactgtcgggaggtatggacctcgattggaacgcattcccg
gacctgctcatcggcgctctggattcagagtctgttgtcctcttgagaggcaggccagtt
atcaacatgactgctactgtaacagtcagtcccagtcaacttgaccgagagagacttgac
tgtaatgtcggtggcgagcagaaactctgctttaccataacagtttgtgctcagtacttc
accgcctctaaatttgatgaacagttggacgtcatattcgaggtggaagccgaagctaag
cgtcgcagcctgggtctgaattccagggtctactttgagggggccgacccggatcatatt
ctctcaaatcaacgtctctccatgaactataaaaccgacgaaagagaggcctgctatcct
ccgatccaagctattttgagagatgacttctcggacatttaccgtcccatccctctgagg
gtgaccttttccctcccagaagaggaaccagagctacccccaccaggggaagccattccc
gatatgaaaggaactgtcatgtttgacactactgttgtgactaccttagcaacagagtgt
gatgaagatttggatgaccccaccacatgcattcctattccaaatgtaaaaaaggttgaa
tttactaaggagtgtgccgaggacgatggagaatgcatcactgatctggtggtcgatgcc
gaattcaaagacctcacagaagtctccaagggcggcaaccctctgatgaaagtcggcatc
gacaatgatttaaaattgtccgtgaacattgagaacaaagccgagcacgcttacgatgcc
aacctgatggtggagtactctaaccatcttgaatatgcaggactggaggaaggagccagt
gagagagtacggtttagctgcggcgatccggtcgctaaagaagataaaaatgataccatg
gtgatcacatgcttcctgggtaacccttatccacccgtccctgcaaaggacaacatggtg
atgcgtttcgatgctaatcgagtgccagcagatgttatgactttgtcatttttcattgaa
gccaccatgaccaatgaagatttgtctcctgaggacaatgagaagtccctgattgtggat
gttgagagtgtgacagacgtacagcttgatggtgctgtcacaaagagtcaacttttcttc
ggtggtgtgatacgtggagaaagtatcatcagtaaagaagaggagattggccccttgatg
cagcagagatggaccgttttcaatcaaggaccagcaatggtagatgaagtgaaggttaca
attgactttccctatgaagtaaccaatgggaagtggttgctttacatgctggaggcacct
gtggtggagaagggcaatggctcatgtgaaatagacgaaagttatctcaacgtagttgga
attaaaccttgtaaatccaattgttcggaaaaagccatcggacaaaagagggagacctat
gaccctgtcgagtattccaatccggatcaagtggattctggttctgtcgttgtcttggat
tgtgaaaacggaacggcccggtgtttcaagtttacttgcattctccgtgacctgactgca
gaacaaaatgagaatgaggccatcatcctcatcaaggctcgtctctggaatgctactttc
atggaggattatctgacagccaagaaggtgacagtacgtatccatggttacgttgagatg
gctaacaatagtattatcacacagacaaacacaaataatgacagagatacgaccaacttt
gatgtggttggccctaacttgtacatcagtggcggtggcatctcctggtggatcattctg
gtggcggtcttgctcggacttctgctcctgatattgctgatagtgatcttgtggaagatt
ggatttttcagacgaccttccattggcggatcgggtggaccatttggtttctttgagaga
aagacgggctacaagtacgccaccgtcacccagaagaatgcagagaccaaagtaggcacg
gagaagaggcagatgtacgacgagatgtataactattccccggtaccgggagaaaaccaa
ccccatcagctgtag
DBGET
integrated database retrieval system
