Apostichopus japonicus (Japanese sea cucumber): 139959358
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Entry
139959358 CDS
T10891
Name
(RefSeq) ras-related protein Rab-40B-like isoform X1
KO
K07928
Ras-related protein Rab-40
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ajj04121
]
139959358
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ajj04031
]
139959358
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
139959358
GTP-binding proteins [BR:
ajj04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
139959358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
Gtr1_RagA
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
139959358
NCBI-ProteinID:
XP_071812973
LinkDB
All DBs
Position
19:30413939..30430491
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AA seq
269 aa
AA seq
DB search
MSSPPHSPTLKNYDYLLKFLLVGDSDVGKEEILEKLDEVARAFATQHLATGYNHKTATIW
MDGKRVKLQIWDTSGQGRFCTIFRTYSRGAHGILLVYDISNRWSFEGIDRWLSEVEEHAP
GVPKILLGNRLHLAFKRQIGLEEALSYAKKHDMVYFEVSGLCDFNVTESLTELSRLVLKR
NGLDRLWSTAKVLSLQDYCCRTIVNCVSTYAIDKLPLPPNLRTRLKSYADANHIHRYLLP
HIEWKDKKRKTILNAQDPNQSLRKSCSIS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaccacctcattctccaaccttaaaaaattacgattatctcttaaaattcctc
cttgtcggagacagcgatgttgggaaggaagaaatcttggagaaactggatgaagtcgct
cgagcatttgccactcagcatcttgctacaggatacaaccataaaactgcaacaatatgg
atggatggaaaaagagtgaaacttcagatctgggatacatctgggcagggaaggttctgt
accatcttcaggacatattcaaggggggctcatggtatcctactcgtctacgacatttcc
aacaggtggtcttttgagggtatcgacaggtggctctcagaagtagaggagcatgctccg
ggagtgccaaagatcttactggggaacagattgcacctagccttcaagagacagatcggt
ttggaagaagccctgtcatacgccaagaaacatgacatggtatacttcgaagtcagtggt
ctctgtgatttcaacgttacagaatctctgactgagctctcccgtctggttctgaaaaga
aatggcttagacagattgtggagtacagccaaagtactaagcctgcaagattactgctgc
cgtaccattgttaactgtgtttcaacctatgccattgacaaacttccgctgccaccaaac
ttgagaactagattaaagtcgtatgccgatgccaaccacattcatagatacttgctgcca
cacatagaatggaaggataagaaaaggaaaaccattctcaatgctcaggatccgaaccag
tctcttcgcaagagttgcagtatatcctga
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