Apostichopus japonicus (Japanese sea cucumber): 139959429
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Entry
139959429 CDS
T10891
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139959429
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139959429
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Gene cluster
GFIT
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NCBI-GeneID:
139959429
NCBI-ProteinID:
XP_071813135
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Position
19:6725513..6759413
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AA seq
835 aa
AA seq
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MGDRRKLQGEIDRCLKKVAEGVEIFEDIWDKVHSATNANQKEKYEADLKKEIKKLQRLRD
QIKTWAASNEIKDKKPLLENRKLIETQMERFKVVERETKTKAYSKEGLGLASKVDPAQKE
REAMTGWLSECIEKLHIKEDQFELELESIKSNSKKKKVSTETQGKVDSLDLYLTRHAHHV
TKLETIMRMLDNNKLDVEQIKSIQEDVEYYIDSHDDPDFEENCYMYDDLNLDEADLNAPA
VVGTPEDPDSLMGKELDDPNMSLSTSAPTTNHSTENNKEEERKRTKSTASESEGSSPRKT
TPSKNSSSQNLTSTSSSNALPNSRPTVVRATSVPGTLSSSNTNSPTSNTTFNNSTSRNGH
NKQNSVSSAVSTSPHTVAQPPSGPAYAVAAGASQHNSSSQGAVNHYRHAASQQQPQISPS
ATLPTNPSHPVGTHFSPQAHHNRVHPSRPDWTGPQQAFNMSPMVNSLEHITSSSVPSSSS
ITTNSHIQSPLTVHASPQQQPQQQQQPMQQQPPPQPQQPPAVPSQQQQPTMPSPSQQQQQ
QQQQQQHTPKSIYNSVSGAPPIVNNTSAGGHPLNSEPLTNGPLSPVVKEDDSNMSSLKIM
AQKVVISSGLESSQAPGYLKSRVLYDSTSLNDAPPSVSQPSSTTPTPMSTATTLPVVTSA
ASQSAGASTQLQETLIPRLKGVAPLGPVTLTKDQQYQQNMMESAFIHPPHPSDSERLRLH
LPRNPYPTPLYHCQHMPARMDSLDFFMRLSTETLFFIFYYQEGTRAQYLAAKALKRQSWR
FHTKYMMWFQRHEEPKTITDEFEQGTYIYFDFEKWGQRKKEGFTFEYRYLEDREL
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgggagatagacggaaattgcaaggagaaatcgataggtgtcttaagaaagtcgcggaa
ggagtggagatattcgaagacatttgggacaaggtgcatagtgctacaaatgcaaatcag
aaggagaaatacgaagcagaccttaagaaagaaattaagaaactgcagaggttgcgagat
caaatcaaaacatgggctgcatccaacgagatcaaagacaagaagcctttgcttgaaaac
aggaagctaattgagacgcaaatggagaggtttaaagtcgtagagagggaaacgaaaaca
aaagcttactccaaagaagggcttggcctggccagcaaggttgacccggcacagaaagag
agggaagccatgactggatggctatctgagtgtattgagaaattacacataaaggaggat
cagtttgaactggagcttgaatctataaagagtaatagcaagaaaaagaaggtttccaca
gagacgcaaggtaaagtggactcgttagacttgtatctcacaaggcatgcccaccacgtt
acgaaactggagaccatcatgagaatgctggataacaacaaattggacgtggagcagatc
aaaagtattcaggaagatgtggaatactacattgattctcacgatgatcctgactttgaa
gagaattgctacatgtacgacgatttaaatctggacgaagctgatctcaatgctccggcg
gtagtgggtacgccagaggaccctgacagtctcatggggaaagagttagacgaccccaac
atgagtctatcgacgtctgcaccaacaacaaaccattccacagaaaacaacaaagaggaa
gagaggaagagaacaaagtctactgcatctgagtcggagggctcatctccaaggaaaacc
acaccaagcaagaattcatccagccagaatttaacgtcgacatcaagttctaatgccctc
ccgaatagtagaccaacggtagtaagggcgacatcagtgcctggaacgttatcatcaagc
aacacaaattcaccaactagtaatacaacattcaataactctacgtctagaaatggacac
aataagcagaatagtgtttcgtcagcagtgagtacgtccccacatacagtggcgcaaccg
ccctcaggtccagcttatgccgtcgcagctggtgcttctcaacacaacagcagctcacaa
ggtgctgttaaccactataggcacgcagcgtcgcagcagcagcctcaaatctcaccttct
gcgacccttccaacgaacccttcccatcccgtcgggacccattttagtccgcaagctcac
cacaacagagtgcatccttccaggcctgactggacagggccccagcaagcctttaatatg
tctcctatggttaattcactggagcacataacaagtagtagtgttcctagcagcagtagc
atcaccacaaacagccacatccagtctccgttaacggtacatgccagtccgcagcagcag
cctcagcaacagcagcagccaatgcaacagcagccgccacctcagccacaacaaccgcct
gctgtacccagtcagcagcagcagcctacaatgccgtcgccatcacaacagcagcagcag
caacagcagcaacaacaacatacacccaagtctatttacaattctgtgtcaggtgctcct
cccatagtcaacaatacatctgctggtggtcatcccttgaattctgaaccactcacaaat
gggccgttaagtcctgtagtaaaagaggatgatagcaatatgtcctcactgaaaataatg
gctcaaaaagttgtcataagctcagggctagagtcatctcaagcacctggttacttaaaa
tctagggtattatacgacagtacttcattgaatgatgcccctccatcagttagtcagcct
tcctcaacgacccccacgcccatgtcgacagcaacaacgcttccggtggtaacgtcagca
gcatctcaatcagcgggtgcgtcaacacagctccaggagactctaatccccagattgaaa
ggggtggcacccctcgggccggtgacgttaacgaaggatcaacaatatcagcagaatatg
atggagtcagccttcatacatccacctcatccatctgattctgaaaggctcaggttacac
ttaccgaggaacccttacccgacacccctgtatcattgccagcacatgcctgcccgcatg
gattcattagatttcttcatgaggctctcaacagagacattgttttttattttttactac
caggagggaacaagagcacagtatcttgcggccaaagcactgaagaggcaatcatggaga
ttccatacaaaatatatgatgtggtttcagaggcatgaggaacccaagaccatcacagat
gagtttgaacagggaacgtacatctactttgactttgagaaatggggacagaggaagaag
gaaggctttacgtttgaatatagatacttggaagatcgagaactctga
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