Apostichopus japonicus (Japanese sea cucumber): 139959466
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Entry
139959466 CDS
T10891
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04120
Ubiquitin mediated proteolysis
ajj04137
Mitophagy - animal
ajj04144
Endocytosis
ajj04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139959466
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139959466
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139959466
04137 Mitophagy - animal
139959466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ajj04131
]
139959466
04121 Ubiquitin system [BR:
ajj04121
]
139959466
03029 Mitochondrial biogenesis [BR:
ajj03029
]
139959466
Enzymes [BR:
ajj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139959466
Membrane trafficking [BR:
ajj04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
139959466
Autophagy
Mitophagy
Other mitophagy associated proteins
139959466
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
HECT type E3
139959466
Mitochondrial biogenesis [BR:
ajj03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
139959466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
139959466
NCBI-ProteinID:
XP_071813225
LinkDB
All DBs
Position
19:complement(23528421..23573966)
Genome browser
AA seq
775 aa
AA seq
DB search
MPNHPGRRDGPMKLRLTVLCAKNLSKKDFFRLPDPFAKILVEGSGQCHSTDFCKSTLDPK
WNQHYDLFVGRQDSIIISIWNHRKIHKKQGAGFLGWVRLQAHAIQRLKDTGFTRLDLCRQ
NADDPDNIRGQLVISITSRDRTNSSHLGAVVDSRQISQALQDPNDLPDGWEERTSTSGRV
YFVNHLNRATQWDRPTRPASEYISPQFSNDAGGNSGIGQTGGSSGNSGDNSHQPPSGNRH
SHHGESHNGHQSRRSASSSNRQRDEDRGQVRRQSSRLRNYMNRSTLHQVVDLPDGYEQRT
TAQGQVYFLHKETGISTWHDPRLPRDFHINDDELGTIPPGWEVRHTQSGRIYFVDHNHRT
TQFTDPRLDANIINQALNKQNGSGELTPVPKYKRDLVQKMKVLHTELLGLRPPTGHCRIE
VSRENIFEESYRQIMKLKSKELRKRLMIKFKLEEGLDYGGIAREWLYLLSHEMLNPYYGL
FQYSRDDIYTLQINPDSGINPEHLSYFHFVGRVIGMAIFHGHYIDGGFTMPFYKQLLGKP
VSLEDMESVDPDLYNSLHWILKNDITDILENTFSVEHDSFGHLQCHELKPGGSNVPVSQE
NKREYVKLYVQWRFLRGIEPQFLALQKGFHELIPSHLLKTFDERELELLINGLGKIDIED
WKSHIRLKHCDAESDIVKWFWRAVDSYDEEKRARLLQFVTGTSKVPLQGFKALQGSTGAP
GPRLFTINQIQGSTDLLPKAHTCFNRLDIPKYETYEKFLDKITCAIEETCGFTVE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaccatcccggaaggcgcgatggaccgatgaaattaaggctcacagtgctatgt
gcaaagaatctatccaaaaaagactttttcagattaccagatccttttgccaagatccta
gttgagggttctggacaatgccattctacagacttttgcaagagtacattagatccaaag
tggaaccaacattatgatttatttgttggccgtcaagacagtattattattagtatatgg
aaccaccgtaaaatccacaagaaacagggtgctggattcctaggatgggttcgccttcaa
gcacatgccatccaaaggttaaaagatacaggctttacacggttagacttgtgtaggcaa
aacgctgatgacccagacaacatcagaggtcaactcgtcatcagcatcacttcgagagac
cggaccaactcctctcaccttggtgctgtcgtggattctagacaaatatctcaagcctta
caagaccccaacgacctgcctgatggatgggaggagaggacatctacctcaggcagggta
tactttgtgaatcaccttaacagagcaacacagtgggataggccgactaggcccgcctca
gagtatatctcacctcagttttcgaatgatgctggtggcaacagtgggattggtcagact
ggtggcagcagtggtaactctggagacaattcgcatcaacccccatcgggtaacagacac
tcccaccatggggagagccacaacggccaccagagtcggaggtctgcctcttcctcgaac
agacaaagggatgaagacagaggacaagtgaggagacaatcctccaggctgcggaactat
atgaacaggtccactctacaccaagtggttgacctgccggatggttacgaacaaagaaca
actgctcagggacaggtgtatttcttgcacaaggagaccggcatcagcacgtggcacgac
ccccgactgccgagagacttccacatcaacgacgacgagttagggaccatcccccccggt
tgggaggtcaggcacacacagtccgggcgcatctatttcgtggaccataaccacaggacc
acacagtttaccgatccccgactcgatgccaacataatcaaccaagcattgaataaacaa
aatggctccggggaactgactccggtgccaaagtataaacgagacctcgtccagaagatg
aaggtcctacacacagaactactcggtctgagaccaccgacaggacattgtagaatcgaa
gtatccagagaaaatatatttgaggaatcttacaggcagatcatgaaactgaagtcaaag
gaactccgcaaacggctgatgatcaagttcaagttagaggagggattggattacggtggt
atcgccagggagtggctgtatctgctctctcacgagatgctcaacccttactatggactc
ttccagtattcaagagatgatatttatactcttcaaatcaatccagattctggtataaat
ccggaacatctctcctattttcattttgtcggccgtgtcattggtatggccattttccat
gggcattatattgacggtggatttaccatgccgttctacaagcaactcttaggcaaacca
gtcagtttggaggacatggaatctgtcgatccagacctgtacaacagtctacattggata
ctgaaaaatgacatcacagatatcttagagaataccttctctgtggaacacgattccttt
gggcatcttcaatgtcacgagttgaaaccgggaggaagtaacgtccccgtctcccaggaa
aataagagagaatatgtaaagttatatgtgcaatggaggtttttacgaggtatcgagcca
cagtttttagcacttcagaagggcttccatgaactcataccgtctcatctattgaaaaca
ttcgatgaacgagaactagagctcctgataaacggccttggcaagatcgacattgaagac
tggaagtctcatatcaggttaaaacactgcgacgcagaatctgacatcgtcaaatggttc
tggagggccgtcgattcgtacgacgaggaaaagcgtgcacgattgttgcagtttgtaaca
gggacttcaaaagtgccattacaggggttcaaagctttgcaaggctcgactggtgctcca
ggaccaaggctattcacaattaatcagatccagggaagcactgatcttcttccaaaggcc
catacatgttttaaccgactggatattccaaaatatgagacgtacgagaagttcttggac
aaaattacctgtgctatcgaggaaacttgtgggtttacagtggaatga
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