Apostichopus japonicus (Japanese sea cucumber): 139959514
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Entry
139959514 CDS
T10891
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
139959514
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
DNA_pol_phi
BUD22
Motif
Other DBs
NCBI-GeneID:
139959514
NCBI-ProteinID:
XP_071813294
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Position
19:complement(27927529..27956805)
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AA seq
567 aa
AA seq
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MADVAAVTDLLAQASVEQPLAEVSFAGQGLKLDSADDAAVVVNAIKESPEMHILALNGNT
VGVEAAAAIAKALEDKSELQRIRWFDMFTGRLRSEIPPALRGLGASIMKSGAHLVEINLS
DNAFGPDGVKAVKDLLESPACYTLQELRFNNQGLGIGGKILAESLIKCHQESSKAGKPLA
LKVFIAGRNRLENPGAIALSKAFKTIGTLEEIQMPQNGINPEGIEAMAEAVVSSPNLRIF
NMNDNTFTARGAIAMSKALMKANNMEILNFGDCLIRSEGASALAETITVALPNIREINFG
FGEIGKDAGLKVAESVEKKTKLEKLELNGNLFGEDGVTLITAILEAIDKNDVLGSFSDDE
GSDDEDEDKEEDEEEEEEGEPELEVKGQSITPSPRKDDPDDLENIPPCTAADFLAFPSLI
KYFGLGIDREQKLLEQLGDKVNDYEEVIKVYVKVAAVMDVNTPKVKNSVNQCADAILSKL
FESEDCRPENIANEILVHLGYIKSEDKKFRPVSNPTGILATLEHVVQQEYFPRSMIAMLT
TFISLPNELVDNYIMPKHNLLQTLYRL
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtagcagcagttaccgatcttcttgcacaagcaagtgttgagcaaccgttg
gctgaagtttcttttgcaggacaagggcttaaacttgattcagcagatgatgctgctgtg
gtagtcaatgctattaaagagagtccagagatgcacatattagctctgaatggtaacact
gtaggagtggaagctgcagctgccattgccaaagccttagaggacaaatcagaattacag
agaataagatggtttgatatgtttaccgggaggctccgttcagaaatcccaccagcattg
agaggattaggtgcatccatcatgaaatccggtgctcacctcgttgagattaatctcagt
gacaacgcctttggaccggacggtgtcaaggcagtcaaagatctccttgagagtccagcg
tgttacacacttcaagaactgaggttcaacaaccaagggcttggaatcggaggaaagatt
cttgctgaatctttgatcaagtgccaccaggagagcagtaaagcgggcaaacctctcgct
ctgaaggtgttcatcgctggaaggaacagattagaaaatccaggagcaatagctctctcc
aaagcattcaagaccattggtacactagaagaaatacagatgccacaaaatggcatcaac
cctgagggtattgaagccatggcagaagctgtagtaagcagccctaatctaaggatattc
aacatgaatgacaacacattcacagccagaggtgcaatagcaatgtcgaaggcactcatg
aaagcaaataacatggagattttaaactttggcgactgcctaatccgttcagagggagcc
tcggccctggctgaaaccatcacagttgcactgccaaatataagggagatcaacttcggt
tttggtgaaattggaaaagatgctggtttgaaggtagcggaaagtgttgagaagaagaca
aaattagaaaaactagaacttaatggaaatttatttggcgaagacggtgtaacgttgatc
acagccatactggaggcaatcgataaaaatgacgtacttggttcattcagcgatgacgaa
gggtctgatgatgaagatgaggataaggaagaggatgaggaggaggaggaagaaggtgaa
ccagagttagaggtcaaaggtcaatctattacaccatctccaaggaaagatgatccagat
gatttagaaaatattcctccctgtacagcagcagattttctagctttcccatctctcatc
aaatattttgggcttggaatcgacagagaacagaaacttttagagcaacttggggacaaa
gtgaatgattatgaagaagtgataaaagtatatgtgaaggtggcagcagtcatggacgtc
aacactccgaaagtcaagaactctgtaaatcaatgtgcagatgccattttgagcaaactg
tttgaatcagaggactgtcgaccagagaatattgcaaacgagattcttgttcatcttggt
tacatcaagagcgaagataagaagttcagaccagtctccaatcctactgggatactcgcc
accttggaacatgtcgtacagcaagagtactttccaaggagcatgattgccatgctcaca
acatttatatctttaccaaatgaactggttgacaactacatcatgcccaagcataacctg
cttcagacgctatacaggctgtga
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