Apostichopus japonicus (Japanese sea cucumber): 139959679
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Entry
139959679 CDS
T10891
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
139959679
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ajj02000
]
139959679
Transporters [BR:
ajj02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
139959679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_15
AAA_29
ABC2_membrane_2
Motif
Other DBs
NCBI-GeneID:
139959679
NCBI-ProteinID:
XP_071813574
LinkDB
All DBs
Position
19:3720140..3757944
Genome browser
AA seq
1719 aa
AA seq
DB search
MGRSSSQFSLLMWKNFVLQKRKILQTCFELGLPILFACLLMIIRAKATFTVYPNVTSYQS
YSLKHLPYNLTYLHLGLPTIWQMAYSPNTSEVTDIIQKMEKNLKPLPFTWVSIGNSQGFD
TEEEMTSFLGEQLVSNTTFLGGIAFHRNTSAPDYNPKNYTYSIRLSSSPRNTFYTESQFS
QLQSEWSTDRLYSPLLISIPRYVTQPWGGTPNYMEEGFLPLQHALDKAIMQCNDISTDGF
EVEMQRYPYPPYNDDLFLIAIQTQLPLIILLSLVYPILNIARSLVYEKEKRLKESMKMMG
LHNWLHWTAWFFRYWLQLTLSVLVMTVLFSISLGDQGAVLKNSDPVLIFIYLELYAMASI
SLAFLLSTFFKKANSSTAGSGVIWFLTYSPFFFLSPRYSSLSRGVKMVTCLLSNDAMAFG
SYLISMYEGTAAGITFDNFYQPVSDDDNLSMLDIYIMLFIDTIFYLTLTWYIEAVFPGEF
GIPRPWYFPLSKSYWCGHIMEDENDEETEASPLLRPCDSDSSDFMENEPVGMHAGIRIQN
LRKVYKGNNVAVNNMCLNMYEGQITALLGHNGAGKTTTLSMLTGLFPPSKGTAIVNGHDI
RTDIDGVHTQLGLCPQHDVLYDNLTVEEHLYFFAKLKGYPSDKVALEIDFYIKSLQLEDK
RHVPIKALSGGMKRKLSVGIALIADSKIIMLDEPTSGMDPSARRFTWDILQKHRKGRTIL
LTTHYMDEADLLGDRIAIMADGQLQCVGSSLFLKRKYGVGYHMSIAKAPDCPVAEVASLV
KRHVPSSVLENNVGAELSFILPQEEVGKFEALFDEMEKKKIELGIDSYGASVTTMEEVFI
KVGDGNRDTKALPDGYGSSTENQAIENRQSAANGSMSYQEEDLEEQTNHLYEENPIRNTG
LMLYCQQFRALFIKRFLHSLRNWLLMIFQLLIPIQCTLVSLLAAIMFPAVSNSPPLSMNI
SVYGDTYIPYQVTNSSTAIGLGEVYASQFNGTRTGTEFVNTSYPDLSMADFLLDRNENTT
VSFNFDNLMASTFNLATGEADKIMSVAHFNNQPYHSAPMSLSAVDNAFLKYYSNDKFSVH
TINHPLPRTVKEQASDQVNKGVQTGFAIAYNMLFGMSFLAASFVVFLIKENTTKSKHLQF
ISGVRSSNFWLSAYTWDLLNYTIPCVLSCALFAAFNVEAFSDDGRFLYIFLLLFLHGWAI
IPLMYLASFLFTVPSTGFVTMTMFNVVFGSTTFLAVEVLLVPELNLVNVGHILDWVFVFS
PSYLLGKAMADFYNNFQILSVCDSSPLAKKFCEENEDLKFQENYLAWEYPGIGRSVVFLF
AEGFIYFGIVLLVEMGVFRKMKYLWKGRKNKKPSQYEPVNNAEEEDEDVRTEREQIERSP
LERLSRSFVLVLKGLRKVYPGRGGRAPVVAVEGSTLGVPSKECFGLLGVNGAGKTTTFKM
LTGDEALSEGDAYVEGFSVKSDTRKVQQRIGYCPQFDGLVDQLTGRETLFMYARLRGVPE
KRIALKVDCLLRVFNMEEHADKQAKAYSGGNKRKLSTAVALIGDPPLVLLDEPTTGMDPV
TRRLLWKALCEIRNAGRSIVLTSHSMEECEALCTRLAIMVNGIVKCLGSTQHLKSRFGEG
FTLLIKASPGPDGQPRDMQHIKDFITREFRGCQLKDEHQGMVHYHITDTSIAWATIFGTL
ERAKDQYGIQDYSVSQTSLEQVFLNFARMQREEDEAPIA
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atggggcgttcttcttcacagttttcccttctcatgtggaaaaattttgtccttcagaaa
cgcaaaattttgcagacgtgtttcgaactgggactacccatcctgtttgcttgtttattg
atgatcattcgtgctaaagctacattcacagtctacccaaatgttacttcataccagagc
tattccttgaaacatctgccttataatttaacgtacttacatttgggactcccgactata
tggcagatggcttattctccaaacacttcggaagtcacagacatcattcaaaagatggag
aaaaatctaaaacctcttccctttacatgggtgtctattggcaattctcagggatttgac
acggaagaagaaatgacatcgtttctcggagaacagctggtgtccaatactacattcctg
ggagggatagcgtttcataggaatacgtctgctccagattataacccaaagaactacact
tatagcattcgattaagctccagtcccaggaacactttctacacagagagccagttcagt
cagctacagagtgaatggagcacagatcggctgtattctccattattaatcagtattccc
cgctacgtcactcaaccctggggaggaacaccaaattacatggaagaaggcttcttacca
ttgcaacatgccttagataaagctatcatgcagtgtaacgacatctctaccgatggattt
gaagtggagatgcagagatacccgtaccccccgtacaacgatgacctcttcctcatagcc
atacagacccagttacctctcataatactcctatcattggtgtatccaatcctcaacatc
gcaaggagtctggtctatgagaaagagaaaagactaaaggaatcgatgaagatgatggga
ctacataactggcttcattggacggcatggttcttccgttattggttacagctgacctta
tccgtcttggtgatgactgtcctcttctccatctccttgggtgaccaaggagcggtcctc
aaaaacagcgaccccgtcctaatcttcatctatctggaactttatgccatggcctcaatt
tctcttgctttcttgctctcaaccttcttcaaaaaagctaattcatccactgctggctct
ggcgtgatttggtttctcacatactcaccgttcttcttcctctcccctcgatattccagt
ctctcgaggggtgtcaagatggtgacgtgtttgctctcgaatgacgcaatggcatttggg
tcgtacctcatcagtatgtacgaaggaaccgctgctggcattacctttgataacttttac
cagcccgtgtctgatgacgataatttgagtatgttggacatatacatcatgctcttcatt
gatactattttttacctaactcttacttggtatattgaagctgtctttccaggggagttt
ggaattccgagaccttggtatttcccactctcgaaatcctattggtgtggtcatatcatg
gaggacgagaatgacgaagaaacagaagcatctccgctcttacgtccatgtgacagcgac
agctctgatttcatggagaatgagcctgtcgggatgcatgctgggattaggatacaaaac
ttgagaaaggtttacaaaggaaataacgttgctgttaacaacatgtgtttgaacatgtat
gaggggcagatcacagctttgctgggtcacaacggagcaggaaagacgaccactctctct
atgttaacaggacttttcccacctagcaaaggaacagctattgtgaatggccacgatatt
cgtaccgacattgatggcgttcacactcagcttggtttatgtccacaacatgatgtactc
tacgacaatcttacagtggaagaacatttatacttctttgccaagcttaaaggttaccca
agtgataaagtcgcgctggagatagacttttacatcaaatcacttcagctggaggacaaa
cggcacgttcctatcaaggccctgtctggcgggatgaagagaaaattgtctgtgggaatc
gccctcatcgcagattcgaagattatcatgttagatgagccaacctctggtatggacccc
tcggctaggaggttcacttgggatatattacagaaacacagaaagggacgcaccatcctc
ctcacgacgcattacatggacgaggcagatctccttggagaccggatagccatcatggca
gatggacaactgcagtgtgtcggctcttccctcttcttaaagaggaaatatggtgtcggc
tatcatatgagcatagccaaagcgcccgactgccccgttgcagaagttgcttcacttgtg
aagagacacgtgccaagctcggttctcgagaataatgtaggagcggaactttctttcatc
ctgcctcaagaggaggtcggtaaatttgaggctctctttgatgagatggagaagaagaag
attgagctgggtatcgacagttacggtgcatctgtgaccaccatggaggaagtatttatc
aaagtgggtgacggtaatcgtgacaccaaagcgttacctgacggatatggttcgtccacg
gagaatcaggcgattgagaatagacagtctgcagccaatggaagtatgtcgtatcaggag
gaagacctagaagaacaaacgaatcatctctatgaggaaaacccaatcaggaatactggg
ttaatgctgtactgccagcagtttcgcgccctcttcatcaagcgcttcctccacagtttg
cgtaattggttgttgatgatattccaattgttgattcctatacagtgcactctggtgtcc
cttctagccgctataatgtttccggccgtgtcgaactctccgcctttaagcatgaatatc
tcagtctatggggacacttacattccataccaggtgacgaattcgtccactgcgatcggt
ttgggagaagtttatgcatcacagtttaatgggactcggaccggcactgaatttgtgaac
acgtcatacccagatttatctatggccgatttcttgctggacagaaatgaaaataccaca
gtgtctttcaactttgataacctaatggcatccactttcaatctcgcgacgggcgaagcg
gacaaaattatgagcgtcgcccacttcaacaaccagccgtatcattcagcccccatgtcc
ctcagtgccgttgacaacgcttttctgaaatattattcaaacgacaagttttcagtgcac
acaatcaaccatcctctgccccggactgtcaaggaacaggcgagcgatcaggtcaacaag
ggagtgcaaacgggatttgcaatagcgtacaatatgctcttcgggatgtctttcttagct
gctagtttcgtcgtcttcctcattaaggagaacactaccaaatcgaagcaccttcagttt
atcagtggcgtcaggtcctccaacttctggttgtcggcttacacctgggatctcttgaac
tacaccataccctgcgtgttatcctgcgccctgttcgcagctttcaatgtggaagcgttt
tctgacgacggcagattcctctacatcttcctgctgctgttcctccacggatgggcgatc
attcctctcatgtacctggcgtcttttctcttcacggttccgtcgaccgggttcgtcacg
atgacaatgttcaatgtcgtgtttgggtccaccaccttcctggcggtggaagtcctactt
gttcccgagttgaacttggtgaacgttggccacatcttagactgggtgtttgtattctcg
ccgtcgtatttgttgggaaaggcgatggcagatttctacaacaactttcagatactttca
gtgtgtgactcatcacctcttgccaaaaaattctgtgaagaaaacgaagatttaaaattc
caagagaactacctggcctgggagtatcccgggatcggccgatcagtggtctttctattc
gccgaaggatttatctacttcggtatcgtcctccttgtagagatgggagtattcagaaag
atgaaatatctatggaaggggagaaaaaataagaaaccatcacagtatgaaccagttaac
aatgctgaagaggaggatgaggatgtccgaacggagagagaacaaatcgagagatctccc
ctggagcggttgtctcgatcgtttgtactcgtccttaaaggtcttcgcaaggtctaccca
ggtagaggagggagagctcctgttgtggccgttgaaggctccacactcggcgtaccgtcg
aaggagtgcttcggtctgctgggagtaaacggtgcgggtaagacgacaaccttcaagatg
ctgacaggggacgaggcgctgagcgaaggggacgcctacgtagaagggtttagcgtcaag
agcgatacaaggaaggtgcaacagcggataggatactgccctcaatttgatggtttggtg
gaccaactgacagggagggaaactctcttcatgtatgcacgtttaagaggcgtcccagag
aagaggatcgccctcaaggtggactgtttactgagagtatttaacatggaggaacatgct
gataaacaggctaaggcatacagtggtggaaacaagaggaagttaagtacagctgtagct
ttgattggtgatccacccctagtcttattggacgagcccactaccgggatggaccctgtc
accaggaggttactatggaaggccctttgtgaaataaggaatgctgggcgatcaatagta
ctaacgtctcatagcatggaggaatgtgaagctctctgtaccagactggccatcatggtg
aacgggatagtcaaatgcctcggtagtacgcagcatctcaagagcaggttcggcgaggga
ttcactctcttgattaaggcctcacccggcccagacggtcagccacgggacatgcaacat
ataaaggactttattactcgagagtttagaggatgccagttgaaggatgaacaccaaggc
atggtccattaccatataacagacaccagtatagcatgggccaccatctttggtactctg
gagagagccaaggatcagtacggcatccaggattactctgtcagtcaaaccagcctggaa
caagtctttcttaattttgcccggatgcaacgggaagaggacgaagcgcctattgcatag
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integrated database retrieval system
