Apostichopus japonicus (Japanese sea cucumber): 139959710
Help
Entry
139959710 CDS
T10891
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139959710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajj03021
]
139959710
03036 Chromosome and associated proteins [BR:
ajj03036
]
139959710
Transcription machinery [BR:
ajj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139959710
Coactivators
SAGA/TFTC/STAGA complex
139959710
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
139959710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Phospholamban
Motif
Other DBs
NCBI-GeneID:
139959710
NCBI-ProteinID:
XP_071813629
LinkDB
All DBs
Position
3:2105966..2122987
Genome browser
AA seq
854 aa
AA seq
DB search
MAGTASVGGNVSSELDPNSLHSVASSLDSKAFLSRTVSQGLVLDHQNTGNHIKEEITPPS
SGMDVKDTQLVNSRIGNSHTVRTDACITLGASHHIPMMSAPHRNFDNINNSTLVGHPNSQ
NSSNSNNISSPNMTGHNNLTRTSLDIDGVARSSPVMIKQEPSLNAVRNSVQLQQPNTTSI
VTTMASSGNSKMVTVNVTSASAIAAPGQMSSPLVMNAGGGPSAVRTLAPQIIPQQIRISA
PQMIAPRGPVVRLPPGTQLPPGFVLINKDGNIQAVQLNTALQPHLASNAGIQSNIAIRPV
QGSPLITPGQRTLIPQPASQGNVSVVSTIALTSPPVLTNAKPLTTVVSALGGSKTSTVSN
PPSVLPSGNVNNRNALSGVNKRAMDDVNKCKNFLNTLIRLASNGNQPPQTVQNVKDLVKN
LIDGVIQPDEFTRKLQKELKSSPQPYLVPFLKKNLPPLRQLIQRGGISPIQGITPNILGG
AQSHIGSTSSITSALSAPKGAIAGQIKESKRHKKIPSAFGQMTPEQLQKFHYGASKHSLV
GQHSTPVGIKAEISPVGTETTTASATSSSSSSKPKSSKSSKSSRSSSSSPRRDKSKDSSF
VRDDDDINDVTSMAGVNLSEESARMASNAEHIGTQLRSCEEEAFLSSSSLQSRIQRKCVE
FKLKDSSREAVDLISSAVEERLKTMVEKLSVIAQHRLEIYREDPKYEPVTDVRSQLKFFE
QLDAMERKRRDEQEREMLLRAAKSRSKQEDPEQLRLKRKAKEMQLMEAEQIRQQEANLTA
LAAIGPRKKKKTDSPPSSSQESVSSLIGSGGSTSSHYRSQLRRIKRVNIRDLIFLMEQET
SCRKSNLLFKTYFK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaccgcgtctgttggtggtaatgtgtcttccgagctcgacccgaattccttg
cattctgtagcaagttctttggattcaaaggcgtttttgagtaggacagtatctcaagga
cttgtactagatcatcaaaataccggaaatcacatcaaggaagaaataacgccgccatca
agtggaatggacgttaaagatactcagttggtaaactcaaggataggcaatagccataca
gtacgtactgacgcctgtataacactaggcgcgagtcatcatataccaatgatgtcagcg
ccgcaccgtaacttcgacaatattaacaattccacacttgttggccatccaaactcacaa
aattctagtaacagtaataatatatcaagtccaaatatgactggtcataacaaccttaca
agaacttcgctagatatcgatggggtagcaaggtcctcacctgtaatgataaagcaagag
ccaagtttgaatgctgtaaggaattctgtacaattacaacagcccaatacaacaagcata
gtaactacaatggcttctagtggtaattcaaaaatggtaacagtcaatgtgacctcagca
agtgcaatagctgccccagggcaaatgagttcacccttagtaatgaatgctggtggaggg
ccatcagcagtcaggacattagccccacaaattattcctcaacaaatacgcatttccgca
ccacagatgatagccccaagagggcctgttgtcaggctcccccctgggacgcaactccct
ccgggatttgttctcatcaataaagatggcaacatccaagccgttcaactcaacacagca
ttgcaacctcatcttgcatcgaatgccgggatacaaagcaatattgccataaggcctgta
caggggagtcctcttataactcctggccaaagaaccctcatacctcaacccgcctcccaa
gggaatgtctcagtggtttctacaatcgcactgacctcacccccagttttgaccaatgcc
aaacccctcaccacagtggtcagtgccctcggagggtcaaagaccagcaccgtgtccaac
ccgccgtcggttctgccctcgggcaatgtcaacaacaggaacgctctgtcgggagtgaac
aagagggcgatggacgacgtcaacaaatgcaagaatttcctcaataccttgattcggctt
gcctctaatgggaaccaaccaccacagacagtacagaacgtcaaggatcttgtcaaaaac
ctcatagacggtgtcattcaaccagacgaattcacccgtaaacttcagaaagagttaaaa
tcttccccacagccgtatttggtgccatttcttaagaaaaatttgcctccccttagacaa
ttaattcaacgtggtggtatttcccctattcagggtattaccccaaacatcttaggaggt
gctcagagtcacatcggcagtacaagttccataacgtccgccctgtcagcccccaaaggg
gccattgcggggcagatcaaggaatcgaagagacacaaaaaaattcccagcgcgtttggt
caaatgacaccagagcagctacagaagttccattatggtgcatccaagcattctctggta
gggcaacacagtacacccgttggcattaaagcagaaataagtcctgtcggcacggaaacg
acgaccgcatcggccacatcatcatcgtcctcctcaaaacctaagtccagtaagagttcc
aaatctagtcggagttcgtcttcgtcacctcggagggataaatccaaagattcatctttc
gtccgagacgatgatgacatcaacgacgtgacctccatggccggggtcaacctgtccgag
gagagtgcacgaatggcctctaacgcagaacacatcggcacgcagctacgctcctgcgaa
gaggaggcctttctctcttcctcatctttacagtcaagaattcaaagaaagtgtgttgag
ttcaaattaaaagattcttctcgagaggccgttgatctgatttcgtcggctgtagaggaa
cggttaaagacgatggtggaaaaactatcagtaattgcacaacacagattagaaatttat
agggaggaccctaaatacgaaccagtcacggacgtaagatcacaactgaagttctttgag
cagctggatgcgatggaacggaagaggcgagacgaacaggagagagagatgttactcagg
gcagcaaagagtcgctccaagcaggaggatcctgagcagctgaggttaaaacggaaagcc
aaagagatgcaattgatggaagcggaacaaatcaggcaacaagaggcaaatcttacggct
ctagcagccatcggacccagaaagaaaaagaaaacagactctcctcctagctccagccag
gagagtgttagttctttgatagggtcaggcggttccacttctagccattacaggtcacag
cttcgaagaatcaagcgagtaaacatcagagatctgatcttcctaatggaacaagaaacc
agctgcaggaaatctaacttactcttcaaaacgtatttcaaataa
DBGET
integrated database retrieval system
