Apostichopus japonicus (Japanese sea cucumber): 139959865
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Entry
139959865 CDS
T10891
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03420
Nucleotide excision repair
Brite
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
139959865
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
139959865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139959865
NCBI-ProteinID:
XP_071813870
LinkDB
All DBs
Position
19:complement(5589175..5608412)
Genome browser
AA seq
1454 aa
AA seq
DB search
MFRMDNSSESTQPQDGTSQSNKEGHLHGPQDVLNEADRNGSTEPKLKKKNVFDIDRNKIK
TMPGSKSQVGELQNLGVDVISQEDFEKDVLDQVEKAISVEEEKAAKERAQRDLDSIQTDI
RLTTRDLNKIEKVLVTMKQQGIQRNISTVQKQKEEKEKELAIFNKKKKSLMNQLEGKPDE
EDESEEEGDEDDQNGSVLHHLLTKPVKDEERNETEDERMLRLGEMTPFEIAEQAVSKRQA
GSTSMDTQSDFAQFLGDKDVQTVKKHVEKSKWKGVQKQGSAPTQVRVAGSGWVSWEESEE
MKKKLKEKSSKIKRKTPKMKFDPKYDSTKQKPWKLVKAKNKQAKKKLRQNWGSDSEISGE
EDERVRDSDGSNFSDDMGNDVRKGLEESSEDEIILPVNDKKRKKKSKAEQIEDGEITCLD
DLKSSYGVKVKRSMADRVAKCLDDSSQDLYFKRLRANQRAKDKKKRQEKKDSEEDGDEDE
DEDDSDSDLEDAELKGGLIVPGEIWHKLYRYQMTGVRWMWELHQQRAGGIMGDEMGLGKT
IQMIAFLAGLKHSHLRDPEFRYEGLGPVLIVCPATVMYQWVKEFHRWYPEIRVAILHTSG
SHIGSKATLVRDIVNTHSVLVTSYTTCRIQQELLHKFDWHYVILDEGHKIRNPDAEATIA
CKQFRTPHRLILTGSPLQNNLQELWSLFDFVFPGKLGTLPIFLEQFSVPITQGGYANATS
VQVQTAYKCACVLRDTINPYLLRRMKVDVQQNIQLPSKNEQVLFCRLTDEQRELYRDYLN
SRECHQIMKGEYQIFSGLITMRKICNHPHLVTGGPRILKGDDEEDLPEEERYGHWSKAGK
MVVITSLLKIWKEQGHRVLLFSQGKQMLDIIESFVKTRYKYLRLDGSTGIASRQSLINRF
NQNSSIFVFILTTRVGGLGVNLTGANRVIIYDPDWNPSTDSQARERAWRIGQKRDVTIYR
LLTAGTIEEKIYHRQIYKHFLTNRVLKDPRQRRFFKSNDLFELFSLNDGTEETETSAIFA
GTGSNIKLNKETTPTPSNRPKKKLQRSRTVPSGISWNGTKDGVDLSKSNSENSLTRLENP
AIKRSASANELDPEGKFSIPKKLRKREKEHMPEEKKKVFDFANISECSEEEKSPAGENGE
RQRMEVRRREEEESAEREARKKKKKRKKKKDAKLDGVRIANLAKHRVFRSTKDEEQEDQD
EEKEAHEKQDKFVLEKLFRKTGVHSALKHDNIMEASNPDYVLIENEATRVAKEAARALKE
SRQTCPNARSGVPTWTGTIGQGGGSGSSRPKFGQKLNSNLAGPVSAQNGNSSEIKEEEKQ
TLLGGKKLFGGDEAINNTSSLQQGSSLPSSSLLLAKMRARNQVQMKEPEEEGSTSNMVPL
VSKKYEQLMNQVKIFITEQARIPGQASTDEILKNFQRKLPPEDTPVFRSMLRQICKFERS
RNGQGTWRLKVEYI
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggatggacaattccagtgagtccactcagccacaggatggtacatcacaaagc
aacaaggaaggtcacttacatgggcctcaagatgttttgaatgaagctgataggaatggg
tcaacagagcccaaacttaaaaagaaaaatgtgtttgacattgacaggaacaaaatcaag
acaatgcctgggtctaaaagtcaagtcggagagcttcagaatcttggggttgatgtcatc
agccaagaagattttgagaaagatgttctcgaccaagtcgagaaagcgatatctgttgaa
gaagagaaggcagcaaaggagagagcacagagagacttggattctattcagactgatatt
aggttaacaacaagagacctgaacaaaattgagaaggttttggtcactatgaaacagcaa
ggaatccagaggaacatttcgacagtacaaaaacagaaagaagagaaggaaaaggaactg
gcaatttttaacaagaaaaagaaatcactgatgaaccaactggagggaaagccagatgaa
gaggatgaatcagaagaggaaggagatgaagatgatcagaatggatcagtcctccatcat
ctgttgactaaaccagtaaaagatgaagagaggaatgagacagaagacgagagaatgctc
cgtctcggtgaaatgactccctttgaaatagccgaacaagcagtcagcaagaggcaggcg
ggatcgacatccatggatacccagagtgactttgctcagtttctcggcgacaaagatgtc
cagacggtgaagaagcacgtggaaaaatccaagtggaaaggtgtccagaaacaagggagc
gcccccactcaagtcagagtcgcaggatcggggtgggtatcctgggaggaatcggaggag
atgaagaagaaattgaaggagaaatcatctaagatcaagaggaaaacaccaaagatgaaa
tttgatccgaagtacgattccacgaaacagaaaccatggaagttagtgaaagcgaagaac
aaacaagccaagaagaagctgcgtcaaaattggggaagtgattcggagataagcggcgag
gaagacgagcgggtgcgagattctgatggcagtaatttctcagatgacatggggaacgac
gttagaaaaggactcgaagaatctagcgaagatgaaataattcttcctgtgaatgataag
aagagaaagaagaaaagcaaggcggagcagattgaagatggtgagataacctgcttggat
gaccttaaatcaagttatggggtaaaggtcaaaaggtcaatggcagacagggttgccaaa
tgtctcgacgattccagtcaagatctgtacttcaagagacttcgagccaaccaaagagca
aaagataaaaagaagaggcaggaaaagaaagattcagaggaggatggagatgaagacgaa
gatgaagacgatagtgattcagacttggaggatgcagaactgaaaggaggtctcattgtc
ccaggagagatttggcataaactctaccggtatcaaatgactggtgtccgctggatgtgg
gagctccaccaacagagggcagggggcataatgggggatgaaatgggtctggggaagacc
atccaaatgatagcattcctggctggtctcaaacacagtcacctgagagaccctgaattt
aggtatgaaggtttgggaccagtgctaatcgtttgtccagccacggtcatgtaccagtgg
gtcaaagaattccaccgttggtaccctgaaatcagagtggccatcttgcatacctcagga
tcccacattgggtctaaggcaacactggtgcgagatatcgtcaacactcacagcgtgttg
gtgacctcgtacacaacctgtcgcatccaacaggagcttctacataagtttgactggcat
tatgtcatcttagatgaaggacacaagataagaaatcctgatgcagaagccaccatagcc
tgtaaacagtttcggacgccacatcgccttatcctcactggatctcctcttcagaacaac
ctccaggagctctggtcgttgtttgattttgtctttccgggcaagctgggtactttgccg
atctttctggaacagttctctgttcctataacccagggaggttatgccaatgcaacgtct
gtgcaggtccagacagcctataagtgtgcctgtgtgctgcgtgacactatcaacccgtac
cttctaaggaggatgaaggttgacgtccaacagaacatacagttaccttcaaagaacgag
caggtcctcttctgtcggttaacggacgaacagagagaactttatagagattacctcaac
tcgagagagtgtcaccaaatcatgaaaggagaataccagatcttctctggtctgatcaca
atgaggaagatttgtaaccatcctcatctggtgactggaggaccccgtatactgaaggga
gacgatgaagaggatctaccagaagaggagaggtacggtcattggtccaaagctggcaag
atggtcgtcatcacctcactcctgaaaatatggaaagagcaaggccacagggtgctactc
ttctcacaaggcaaacagatgttagacatcatcgagtctttcgtgaagaccagatataaa
tatcttagactcgacggcagcacaggaatcgcatccagacagtcgttgattaacaggttt
aatcagaactcatcaatatttgtattcattttaactacacgtgttggtggcctcggggtc
aacctgacaggtgcaaacagagtcatcatttatgaccctgactggaatcctagtacagac
tcacaggccagagaaagagcttggaggattggccagaagagagacgttacaatctataga
ctcctgacagctggaacaatagaagagaagatataccacaggcaaatttacaagcatttc
ctgaccaatagagtactaaaggatccacgccagagacgattcttcaagtccaacgatctg
ttcgagctctttagcctaaacgacggaacagaggagaccgagactagtgcaatattcgct
ggcacgggatctaacataaaattaaataaggaaactacccctactccatcaaacagacca
aagaaaaaactccagaggtccagaacagttccttccggaatatcatggaatggtaccaaa
gatggggtggacttgagtaagtccaactcagagaatagtctgaccagattggaaaaccct
gccatcaagagatccgcgtccgctaacgagctggaccccgaggggaagttctcaattccg
aagaaacttcgaaagagagaaaaggaacacatgcccgaagagaagaaaaaagtgtttgat
tttgcaaacatctcggaatgcagtgaggaggaaaagagtccggcaggtgaaaatggtgag
aggcagaggatggaagttaggaggagagaggaagaggaaagtgccgaaagagaagcaaga
aagaaaaagaagaagaggaagaagaagaaagatgcaaagctggacggagttcgtatcgca
aaccttgccaaacatcgagtcttcaggtcaaccaaggatgaggaacaggaagatcaagat
gaggagaaagaggcccacgagaaacaggataaatttgttctggagaaactcttccgaaag
acaggagtccacagtgccttgaaacacgacaacatcatggaagcttcgaacccagattac
gtactaatcgaaaatgaagctacccgggtcgccaaagaagctgccagagccctgaaggaa
tccaggcagacctgtccgaatgctcgcagcggggtccccacgtggactgggacaatcggt
caaggagggggctctgggtcgtccaggcctaaatttgggcagaaactgaacagtaatcta
gcaggccctgtctcggcacagaatgggaacagttctgaaataaaggaggaagagaagcag
actctcctcggaggaaagaaattgtttggcggagatgaagcaataaataacaccagctct
ctgcaacaaggatcgtctctcccatcctcctcgcttctcctcgccaagatgagagcgagg
aatcaagtccagatgaaggaaccagaggaagaaggaagcacgtcaaatatggtgcctttg
gtctccaagaaatacgaacaactcatgaaccaggtgaaaatatttatcaccgagcaggct
cgcatccccggacaagcgtccacggacgaaatcctgaaaaactttcagaggaagctcccc
cccgaagacacgccagtttttaggtcgatgcttcgtcagatctgtaaattcgagagaagc
agaaatggacagggcacctggagactaaaagtggaatacatttag
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