Apostichopus japonicus (Japanese sea cucumber): 139959877
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Entry
139959877 CDS
T10891
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139959877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajj03041
]
139959877
Spliceosome [BR:
ajj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
139959877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
CTD12
Motif
Other DBs
NCBI-GeneID:
139959877
NCBI-ProteinID:
XP_071813884
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All DBs
Position
19:15699338..15710951
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AA seq
492 aa
AA seq
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MSLADELLADLEEMAEGGDHLEDAEMNDIEDVEEAGMVVESKVPSVRKIAKLRDSDELAD
VMVKIDKYQKNPQTGPFEGMMEANPEYQLIVQANNLSAEIDNEVNIVHKFVRDNYSKKFP
ELDSLVPTAFEYLKTVKELGNDLSKAKNNETLQEFLTNAVIMVVSVSASNTAGSELTADE
LNTIFEACDMAFDLNDYKSKILSYVESRMSFISPNLSIIVGASTAAKLMGAAGGVSNLSK
MPACNILVLGAQKKTLSGFSSVATMPHTGYIFYSELVQGTPPDLRKKAAKLVSSKSALAA
RVDSFHESIDGDHGMRLKEEIERKLAKLQEPPPPKPPKPLPAPIDGQRKRRGGKRVRKMK
EKLGMTEFRKAANRMSFGEIEDDAYQEDLGFSLGQIGKSGSGKVRGPQVDNKTQVKISKS
LQRQLQKQQMHGGKSTVRGRETSGTASSVAFTPLQGLEIINPSAAEQKVAEANAKYFSAT
TGFQRVKTEQKY
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggccgatgagttattggctgatctagaggagatggcagaaggaggggatcat
ttggaagatgcagaaatgaatgatattgaggatgtggaggaagcaggaatggtggtggaa
tcaaaagtaccatcagtccgaaagattgcaaaattgagagacagtgacgagctggcagat
gtaatggtgaaaattgataaataccagaagaaccctcaaacaggaccctttgaagggatg
atggaagccaatcctgagtaccaactgattgtacaagctaataatcttagtgctgagata
gacaatgaagtcaatattgttcataaatttgtgcgagacaactattccaaaaagtttcca
gagctagattccttagtaccaactgcatttgagtatcttaaaactgttaaggaattagga
aatgatttatctaaagccaagaacaatgagactttacaggagttcctgaccaatgctgtg
ataatggtggtgagtgtatcagcttccaatacagccggatccgagctcacggcagacgag
ctgaacacgatattcgaagcctgtgacatggcctttgaccttaatgattacaagtcaaag
atcttgtcttatgtggaatccagaatgtctttcatttcaccaaacttatcgattatagtc
ggcgcatccacggcagcgaagctgatgggtgcagcgggaggggtctcaaatttatccaag
atgcccgcttgtaacatccttgttctgggtgcacagaagaaaacattgtctggattctct
agtgtagccacaatgcctcatacaggttatatattttacagtgaattggtacaagggaca
cctccagatctacggaagaaagcggccaagctggtgtcttccaagtccgctttggctgct
agggtcgatagcttccatgaaagcatcgacggggatcacggtatgcgtctgaaggaggaa
attgagaggaaactggccaaactacaagaaccaccacctcccaaaccacctaaacccctc
cctgcaccaatcgatggtcagaggaaaaggaggggtggaaaacgggtaaggaaaatgaag
gagaaacttggaatgactgagtttaggaaagcagcaaacagaatgagcttcggtgagatc
gaggacgacgcctaccaggaagatcttggcttctccttgggacagatcggaaagtcgggg
tcaggaaaagttagaggaccccaggtggacaacaagactcaggtcaagatttcaaagagt
ttacagagacaattgcagaaacaacagatgcatggagggaaatccacagtcagagggagg
gaaacatcgggaacagcctcaagtgtggcatttactcctttacagggtctggagatcatc
aatccaagtgcagctgaacagaaagtagcagaagctaatgccaagtacttctcagcaact
actggattccagagagtgaaaactgagcaaaaatactga
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