Apostichopus japonicus (Japanese sea cucumber): 139960014
Help
Entry
139960014 CDS
T10891
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ajj03037
]
139960014
Cilium and associated proteins [BR:
ajj03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
139960014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_HPS5
WDR55
Beta-prop_WDR35_TULP_N
TPR_GEMI5
TPR_COPA_B
TPR_IFT80_172
TPR_2
PPR_2
WDR90_beta-prop_4th
EIF3I
Motif
Other DBs
NCBI-GeneID:
139960014
NCBI-ProteinID:
XP_071814113
LinkDB
All DBs
Position
19:22764963..22808994
Genome browser
AA seq
1476 aa
AA seq
DB search
MAIFFDHQVQAPDTSGHLDICWHQEHPLLAVASRNDGGGGFVQLYDDEGEPIPNAAMQRS
CFSHSLSWHPTKPILAVGWNSGEILIWNQQDKELYEAAKIHKADVCLLQWSMNGQRLLSG
DKSGLLLLWKTDNRGRTQPMPACQQESQQIPAQCIFPPGQDTQKAEEMKALARAAVRGDE
KALDMFSWRRDPSPAKSSVLGLSGDGNSCFVGGSEGRIYFIKDSGSFSEVGSVQGEVKKL
LYNEHRNVLVVITKGMLLSQYSVSADGKLTEMMKVKLSGKVSESDCDMVWAGKGLLATAT
GECLIRMWDLDKDDNYILGLDSKQGFMTGECINCVAFSEKKGILAAGTDQGHIAMWKYAP
STSHITRRQDGESKWKVQLPSVMEGNILQIKWGTSRDLLCINTLDNVSILSQHIMSSHMR
QQVAVVQTGPANLSVDLFTKGVHLELKTDVHVHGVANSKDNLAIWNGKKAVIYEIGNTIR
AAGTFVTESPLVVVHEQSVYTTEPGKIQVRNFQGTVKQLITLTEQDGEPICFDACEKFLA
VATSCHMIKVFDISRREAKLHGNPRNMADLIPKIGVILMAKINSNGTKVAFICEQADGIP
DSKVYIWDVDLDSLGFFDFATGLGDQEDIPVVENEDELSDIERGKRKAADELSGRHPVSI
HWDGEEKKLLVCEARLSVPLEMTSPRKMTSLISFTNTPAEVIVVSLFSTLEQGVVMQDSF
ALHSGYDKLIGVEVPYYYFIKKDLLSSGEVVGEKANEGVSLSDKSSVCKQVMRDFAGLED
GDKTSRDAMMNFSFFLTIGNMDEAFKAIKLIKSESVWENMAKMCVKTRRLDVAKVCLGNM
GHARGAKALREAENEPELDARVAMLAIQLGMLEEAERLYKNCERFDLLNELYQASGQWGK
AMETAELRDRIHLRTTYYNYAKHLEAKGDFNGAIPNYEKSDTHRFEVPRMLFEEPQALEA
YIMKNKDKTLRKWWAQYMESTGDLETALQFYEASQDYLSQVRIHCYCGALEKSCEVANET
GDKAACYHLARQYELQEQHKEAVHFFTRAQAYSQAIRICKENDMADQLMNLALMSSKTDM
IEAARYYETNPETRDKAVMLYHKGGHFSKALELAFESEQFGALQLISDDLDEKTDPVLLN
RCAEFFMEHGQYDKAVDLLVVGGKYFEALELCQKHSVNITEKLAEKMTLAKDGDQGEMRL
KLLEKVADLCFLQGSYHLATKKYTQAGNKGKAMRALLKSGDTEKIIFFAGVSRQKEIYVM
AANYLQSLDWRKDPEIMKNIIGFYTKGRALDSLAGFYDACAQVEIDEYQNYDKALGALSE
AYKCLTKAKMKNQSLQEEKLAALKHRIGLVKKFVQARRTYDEDSDEAMKQCQVLLEEPEL
DSAVRIGDVFGMIIEHYARQEDFRKAYSFMEEMRTRIPTVNMAYYINIKTIEGIHKALDI
PMGRGMGVKETPGGGHEEEEEEEELEEELEEDESFA
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atggccatcttttttgaccatcaagttcaagccccggatacttcgggtcatttggatatc
tgttggcatcaggaacatccactattggcagttgcatcaaggaatgatggagggggtgga
tttgtccagttatatgatgatgagggtgaacccattcctaatgctgcaatgcaacggtcc
tgtttctcccattctctctcgtggcaccccaccaaaccgatattggcggtcggttggaac
agcggagagatattgatatggaaccagcaggataaagaactctacgaagcagccaagatc
cacaaagctgacgtgtgcttactgcagtggagcatgaacggacaacggctactctctggc
gacaagagtggcttactgctcttatggaagaccgacaaccgtggccgtactcaaccgatg
cctgcttgtcagcaagagtctcaacagatcccagcacagtgcatctttcctccaggacag
gatacacagaaagcagaggagatgaaagccctagctagagcagcggtgagaggagatgag
aaagcgctagatatgttctcctggaggagagatccttctccggccaaatccagcgtgcta
ggtctcagcggagatggcaactcctgctttgtcggtggttcggaaggacgaatttacttt
attaaggatagtggatctttctcggaggttggctccgtgcagggtgaagtaaagaagctg
ttgtacaacgagcacagaaatgtcttagtcgtgataactaaagggatgttgctatcgcaa
tacagcgtttctgctgatggcaagttgactgaaatgatgaaggtgaaattgagtggcaag
gtctctgaatcagattgtgatatggtttgggctggaaaaggtctactggcaactgccaca
ggagaatgcttgataaggatgtgggatttggacaaagatgacaattatattcttggattg
gatagtaagcaaggtttcatgacaggggagtgcatcaactgtgtggctttctctgagaag
aaaggaattctagctgctggaacagaccagggtcatatcgccatgtggaagtatgccccc
tctaccagtcacatcaccaggaggcaggacggcgagagcaagtggaaggttcaactgcct
tcagtgatggagggaaacatccttcagatcaagtggggcaccagtcgggatctactctgc
atcaacacactggataatgtctccatcctctcccagcatatcatgagctctcatatgaga
cagcaggtggcagtagttcagactggaccagctaacttgtccgtggatctattcactaaa
ggagtccatctagagttaaagacagatgtacacgtccatggtgtggccaactcaaaggac
aatctggccatttggaatggaaagaaggctgtgatttatgaaataggcaataccattcgt
gctgcaggtacattcgtaacagaatctccattggtggtggtccatgaacagagtgtgtat
acgacagaacctggcaagatacaagttaggaactttcagggaactgtgaagcaacttatc
acgcttacagagcaagacggagagcccatttgtttcgatgcttgcgagaaatttctggct
gtagctacaagttgtcatatgattaaagtttttgatatttcacgaagggaagcgaaatta
catggcaatccaaggaatatggctgatctgatacccaagataggggttatactgatggct
aaaataaacagcaacggaaccaaagtggctttcatatgtgaacaggctgatgggattcca
gacagcaaggtctacatctgggatgtggatttggactcgctggggttctttgactttgcg
acgggactgggagatcaagaagacatacccgtggttgaaaatgaagatgaactcagtgat
attgaaagaggcaaacgtaaagcagcagacgaactctctggacgacatcctgtcagcatt
cactgggacggtgaagagaagaaactactggtctgtgaggctagactctcagtaccgtta
gagatgacctcaccgagaaagatgacctccttgatttctttcactaacacacctgctgag
gtcatagtggtgtcgttattcagcacactggagcaaggtgtggtgatgcaagacagcttc
gctctccactctggatacgataaactcatcggagttgaagtaccctactattacttcatc
aagaaggatttattatcttccggggaagttgttggcgaaaaggctaacgagggagtttcc
ctgagtgacaaatcgtccgtctgcaaacaggtgatgcgagacttcgccggattggaggat
ggagacaaaacttctcgggatgcgatgatgaacttcagtttcttcttgaccatcggcaac
atggacgaggcattcaaagcaatcaaactcatcaaaagtgagtctgtatgggagaatatg
gccaagatgtgcgtcaagacacgacgattggacgtggctaaggtgtgcctcgggaacatg
ggacacgccagaggagcgaaggccctgcgagaggcggagaatgagcccgagctggacgct
agagtggccatgttggccatacaactagggatgctggaagaagcggaaagactttacaag
aattgtgaacggtttgatcttctgaatgaactttaccaagccagtggccaatggggaaag
gccatggagactgctgagctgagagacaggatccaccttaggacgacctattacaattac
gccaaacatctcgaagccaaaggagactttaacggcgccatcccaaattatgaaaaatcc
gacactcatcggtttgaagttcccagaatgctgttcgaggaaccacaagcgttagaggct
tacatcatgaagaacaaagataagactttgaggaaatggtgggctcaatacatggagagc
accggtgacctcgaaacagccctgcaattctacgaagcgtcccaagattatctctcgcag
gtccgaatccactgttactgcggtgctttggaaaagtcatgtgaagtggccaacgagact
ggagacaaggcagcctgctatcatttagccaggcagtatgagctgcaggaacaacataag
gaggctgttcatttcttcacacgagcgcaggcctacagccaagctattcggatttgcaag
gaaaatgacatggccgatcagctgatgaacttggctctgatgagcagcaagaccgacatg
atcgaggcggccaggtattacgagacaaatcccgagacacgggacaaagcggtcatgcta
taccataagggaggacatttctcaaaagccttggagctggctttcgagagtgagcaattt
ggagctctgcagcttatatccgatgacctggacgagaaaacagacccagtgctgctgaat
cgatgcgcagagtttttcatggaacacggccagtacgacaaagctgtggatctgttggtt
gtcggaggaaagtactttgaagccttggagctatgtcagaaacatagtgttaacatcacc
gaaaagttagctgaaaagatgacactggctaaagatggcgaccagggtgaaatgaggcta
aaactcttggagaaagttgccgatctctgtttcctccagggctcgtatcacctagcaacc
aaaaaatatacacaagctggtaacaagggaaaggcaatgagggcgctactcaaatcggga
gacacggaaaagatcatcttcttcgccggcgtctcgcggcagaaagagatctacgtgatg
gcggcaaattatttacaatctctggattggaggaaagaccccgagatcatgaagaacatc
atcggattctacacgaaagggagagcgttggattccttggcagggttctatgatgcgtgt
gctcaagtggagattgacgaatatcagaattacgacaaagctctgggagccctcagcgag
gcctacaaatgcttaactaaagccaagatgaagaatcagtccctgcaggaagagaaactg
gcggctctcaaacaccggatcgggctggtcaagaagtttgttcaggctcgcagaacatac
gatgaagactctgatgaagcaatgaagcagtgtcaggtcctgttggaggagcccgagctg
gattcagccgtcaggatcggtgacgtgtttggaatgatcatagaacattatgcaagacaa
gaagacttcaggaaggcctacagcttcatggaagagatgcgaacgagaattccaacggtg
aacatggcgtactacatcaacatcaagactatagagggcattcacaaagcactcgatatc
cccatggggagaggtatgggggtcaaagagacccccggaggcggccacgaggaggaagag
gaagaggaggaactagaagaagaattggaagaagatgagagttttgcttaa
DBGET
integrated database retrieval system
