Apostichopus japonicus (Japanese sea cucumber): 139960217
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Entry
139960217 CDS
T10891
Name
(RefSeq) nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139960217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139960217
03036 Chromosome and associated proteins [BR:
ajj03036
]
139960217
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139960217
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139960217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
139960217
NCBI-ProteinID:
XP_071814508
LinkDB
All DBs
Position
19:complement(2253467..2274809)
Genome browser
AA seq
665 aa
AA seq
DB search
MAMQRREIPEFIIPVSGSQDNLLSARWGQGLQLMVFSGNGKRRYMAGEADVAVNLDKPSV
VHDVRWQTDMHYPATRKLAAQSHEIFTSLQKHTSDATDGTKKPQLVKFSRRYRVAMMECL
EDLRKAASDMAEDEGDQETYKDMCQLYQQLELIWNLCEILYIENLPGGVILQQLLDWVKL
HFTDADTLAARIISEGEINISKDYWSAVYIYVLQGRLAEARHLLSMNPETQHDVHGAYAR
IDELMRRMPVFSVFSRQSLAEFDLKWRNWQEICQQLLVDGVFVSYQPLETICRILAGQQD
VLDQLQDLAGDWYQIMVTKLLYTNPMVKAVDLQYHAKSCMDKFRGSSRLLPLDQILLAAL
EYDVTQIIKISSSNLSNWWFVAHLADLLHHAGQLETHQLDFGATMREFLLLEYASTLMAR
ESMWQIIIEYLEHCPVFGRHHLELFVEKIPLQSEKKAYKVLKICDEKNMDDQAQSICKVM
GMRALQEKRLGTALTWCLRSQDASFATYLAEKFLTEYSLNGNFSNLDLIDNLGSSMLVSD
RLTFLAKYRDFHRLYEEGEFAEAGELLLSLIEANLAPKQFMLILLTDALPLLELDVVVFS
SKQTSQLLMCKENLLKWYQSEEYTREILPKKSKGHVELEKEKMELLQLGLSRNLSRALLE
ESVRT
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcagcggcgggaaattcccgaattcattattcctgtaagtggcagccaagat
aacttacttagtgccagatggggacaaggacttcaacttatggttttctctggaaatgga
aaacgcagatacatggcaggagaggctgatgttgctgttaatcttgacaaaccttcagtt
gtccatgatgtcagatggcaaacagacatgcactacccagctaccagaaagctagcggcc
cagtctcatgagatatttacatcacttcagaagcacacgtctgatgccacagatgggaca
aagaagcctcaacttgtaaaatttagccgtcgctacagagtcgcaatgatggaatgtctg
gaggaccttagaaaggctgcctctgatatggcggaggatgagggtgaccaagaaacctat
aaggatatgtgccaactctatcagcagctagaactcatctggaatctctgtgaaatactc
tatattgaaaatttgccaggtggcgtcattctgcagcagctactggattgggttaaactt
cactttactgatgcggatactctggcagccaggataatatctgaaggagaaataaacatt
agcaaggattactggtctgcggtttatatttatgttctacaaggaaggctggcagaggca
aggcatttgttgtctatgaatccagagacacagcatgacgttcatggggcttatgcaagg
attgatgagcttatgagacggatgccagttttcagtgtcttcagtcggcagtcactggca
gaatttgatctgaaatggagaaattggcaggaaatatgtcagcagttactggtggatgga
gtttttgtatcttaccaaccattagaaaccatttgtagaatactagctggacaacaggat
gttctggaccagcttcaagatctagctggggactggtaccagataatggtcacaaaactt
ctgtacactaaccctatggtaaaggcggttgatttacagtaccacgcaaagtcttgcatg
gacaagtttcgaggaagcagtcgtcttttgccgttggatcaaatccttctagctgccttg
gagtatgatgttactcaaattatcaagataagcagttcaaatctcagcaactggtggttt
gtagctcacttggcagatctattgcatcatgctggacaacttgaaacgcatcaacttgac
tttggagcaacgatgagggaattcctgctcctggagtatgcatcaacactaatggcaaga
gaaagcatgtggcaaattatcatagagtatttggaacattgccctgtgtttggcaggcac
catttggaactctttgttgagaagattcctttacaatctgagaagaaagcctacaaagtt
ttgaagatctgtgatgagaaaaacatggatgatcaagctcagagtatctgtaaagtgatg
ggaatgcgggcattacaggagaagaggttaggcaccgccctcacatggtgcctccgttcc
caagatgcctcttttgccacctacctcgccgagaaattcctgacagagtattccctgaat
ggaaacttttcaaacttagacttgatcgacaatcttgggtcttcaatgcttgtcagtgat
agattaacattcctcgcaaaatacagagacttccatcgactttatgaggaaggagaattt
gccgaagccggggaattgctcttatctttgattgaggcaaatcttgctccaaaacaattt
atgctcatcctgctcactgatgcgcttccgttactggagttggacgttgtggtcttctcc
agtaaacagacaagtcaacttctgatgtgtaaagagaatttactcaagtggtatcaatcc
gaggagtataccagggagatattacccaagaagagcaagggacatgttgagctggagaag
gagaagatggaactgttacagctggggcttagtagaaatttatcgagagctctcctggag
gagagtgtcaggacatga
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