Apostichopus japonicus (Japanese sea cucumber): 139960235
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Entry
139960235 CDS
T10891
Name
(RefSeq) intraflagellar transport protein 56-like
KO
K19685
intraflagellar transport protein 56
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ajj03037
]
139960235
Cilium and associated proteins [BR:
ajj03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139960235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC3
TPR_14
TPR_2
TPR_8
TPR_16
TPR_9
TPR_17
TPR_Slam
TPR_7
TPR_1
Coatomer_E
Fis1_TPR_C
TPR_12
TPR_11
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
139960235
NCBI-ProteinID:
XP_071814529
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All DBs
Position
19:12033562..12049441
Genome browser
AA seq
555 aa
AA seq
DB search
MMLSRQKPATGPGSSTPAQEAKKKKQMPKLEDFLDSRDYTGAIVLSEFTRNSGKGSEETD
MWVAYCAFHLGDHKQAMEEYEKMTKRDNFNPEVWLNLACCYFFLGMYKEADESARKAPKT
DLQNRLLFHLSQKFNDEKRLMSYHQNLQDMIPDQLSLASIHYLRSHYQEAIDIYKRILLD
NRDYLALNVYVALCYYKLDYYDVSQEVLAVYLQHFPDSAIALNLKACNHFRLYNGKAAEA
ELKNLQDLASPSFTFAQDLIKHNLVVFKGGEGALQVLPPLIDVIPEARLNLVIYYLKQDD
VNEAYNLIKDLEPTTPQEYILKGVVNAALGQEQGSREHLKIAQQYFQLVGGSASECDTIP
GRQCMASCFFILKQFEDVLIYLNSIKSYFYNDDSFNFNYAQAKATAGNFKEAEEILLLIQ
REKLKVDYTYLSLMARCLIMNRKPRLAWEVYLKMETSGESFSLLQLIANDCYKMGQFYYA
AKAFDVLERLDPNPEYWEGKRGACVGVFQQIIAGHEPRETLRDILQILRNTGNPQVEYII
RVMKKWAKDNRVPVS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgatgctctcaaggcaaaagcctgccacagggccaggctcaagcaccccagcacaggag
gctaaaaagaagaaacaaatgcccaagctagaagactttctggacagcagagattacaca
ggggcaattgtattaagtgagttcaccaggaacagtggtaaagggagtgaggagaccgac
atgtgggttgcctactgtgcatttcatctgggagatcataaacaagccatggaggagtac
gagaagatgaccaagagagataacttcaacccagaggtttggctgaatctcgcctgctgt
tacttctttcttggcatgtacaaggaagctgatgaatctgctaggaaagcacccaagaca
gatctgcagaataggcttttgtttcatttgtctcaaaagtttaatgacgagaagcgattg
atgtcttatcaccaaaaccttcaagatatgatcccagaccagctgagcttggcatctata
cattaccttagaagtcactaccaggaagccatcgatatctacaagaggatattattggat
aacagagattatctggctctcaatgtctacgtggctctctgttattataagctggactat
tacgatgtctctcaggaggttctagccgtctacttacagcatttcccagacagtgccatt
gctctgaatctcaaagcctgtaatcactttagactctacaatggcaaagctgcagaggct
gagctaaagaatcttcaagatttagcatcgccgtcctttacgtttgcacaagacttgatc
aagcataatttggtcgttttcaagggtggagagggagcccttcaggtactacctcctcta
atcgatgtcattcctgaggctcgtcttaacctggtcatctattacctaaagcaagatgat
gttaacgaagcatataacttaatcaaagacttggaacccacgacaccgcaggagtacatc
cttaaaggtgtggtgaatgctgccctcggccaggaacagggttcgagggaacacttgaaa
atagctcagcaatattttcagcttgtgggtggatctgcaagtgaatgtgatactatccct
ggaaggcagtgtatggcatcctgtttcttcatcttaaagcagtttgaagatgttttaatt
tatcttaattccatcaagagttatttttacaatgatgattccttcaacttcaactatgcc
caggctaaagcgacagcaggaaacttcaaggaagctgaggagattttgctgttaattcaa
agagagaaacttaaggttgactacacctacctgagcctgatggctcgctgcttaataatg
aaccgtaaaccacggttggcttgggaggtttacctcaagatggagacatcgggggagtct
ttcagtctgttacaactgatagcgaatgactgctataagatgggacagttttactatgct
gccaaggcctttgatgtgttagagaggttggatcctaatccagaatattgggaaggcaag
agaggggcctgtgttggagtctttcagcaaatcatagcaggtcatgaaccaagggagaca
ctaagagatattctacagatccttcggaacacaggaaacccgcaggtcgagtacatcatc
agggtaatgaagaagtgggccaaggacaaccgagtacccgtttcatag
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integrated database retrieval system
