Apostichopus japonicus (Japanese sea cucumber): 139960322
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Entry
139960322 CDS
T10891
Name
(RefSeq) RNA exonuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139960322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ajj03009
]
139960322
Ribosome biogenesis [BR:
ajj03009
]
Eukaryotic type
Pre-60S particles
RNases
139960322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrf2
TRAF-mep_MATH
Motif
Other DBs
NCBI-GeneID:
139960322
NCBI-ProteinID:
XP_071814716
LinkDB
All DBs
Position
19:18717697..18731241
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AA seq
511 aa
AA seq
DB search
MGSYSEGIVPGVYGHENGTGLNSKLKSHHQGDQVRRKDIPRIFLNCFKNHTQHVVQKGQC
RCKKTYSRVPLEEIRNLLHLSLLGKQSQCKPRWCTLRRAQEISKVLVVVMHGVSSSCYRS
HKDCFVKLTEISKVQTKVGFTSKQDLVAALFKTGSSETKKEPDGANDNYPGRSSFLVSKT
KMVSLNYPLRDDDNIVSTNHTDEVSDNSPLFALDCEMCQTQEGLELAKVCLVEEDGQLIY
SRLVKPENEIINYLTEYSGMTAETLQEVNTRLRDVQEEIIQLLPPDAILVGQSIENDLRA
LKMFHPFCVDTSDMFTRSGHRVGLANLTQFYLSREIQSGDQGHDPTEDARAALDLFKLRL
AEGTKLPNYKRRKGSQQPERISVDSSLLAGCEDQRKTCAIVDVRKVIRQFEANAADILEC
INDSESFKKATSAIKRRDFTWLQFHSLHNLLQGNWISEETLQMTLRKLDERLHQLYQCLP
GKSLLITLMAPSDTSSKQLGRCFVTLTKESL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgggatcatattcggaggggatcgtacctggagtttacggtcacgaaaatggcactggg
ttgaattccaaacttaagtcccatcatcagggagatcaagtcagaaggaaggacattcct
aggatctttctaaattgcttcaagaatcacacacaacatgttgtacaaaaaggacagtgc
agatgtaagaaaacatactctagggtacctctggaggagattcgaaatctgctgcacctg
tccttgctgggaaaacaatctcagtgtaaaccacgatggtgcactcttcgacgagcacaa
gagatttccaaagtcctggttgttgtcatgcatggcgtctccagcagctgctacagaagc
cacaaggactgctttgtgaagttaactgaaatatccaaagtacaaacaaaggttggattc
acatcaaagcaagatctggtcgcagcattgttcaagacaggatcatcggaaacaaagaaa
gaaccagatggtgctaatgataattatccaggaaggtcttcattccttgtttctaaaaca
aaaatggtgagcttgaactaccccttgagggatgatgacaatattgtctccaccaaccat
acggatgaagtatcagacaatagcccattgtttgcccttgattgtgaaatgtgtcagact
caggaggggttggagctggccaaagtgtgcttggttgaggaggacggtcagttgatatac
tcaagactggtcaaaccagaaaatgaaatcataaattatttgaccgagtacagtggcatg
acagctgaaactttacaggaggtaaacacgagactacgagatgtccaagaggagattatt
cagcttctaccacctgacgcaatcctggttggacaatccatcgaaaatgacctcagagct
ttgaagatgttccaccccttttgtgttgatacaagtgatatgtttacaaggagtggccat
cgagtaggattagctaatctgacacagttttatcttagtcgggagattcagtcgggggac
caaggtcatgaccccactgaagatgcgagagctgcccttgatctgttcaagttacgactc
gcggagggaaccaagttaccgaattacaaacgaaggaaaggttctcagcagccggagaga
atatctgttgattcaagcctcctagcaggatgcgaagaccaacgtaagacctgtgcgatt
gtggatgtcaggaaagtaatacgccagtttgaagccaacgctgccgatatcctagagtgc
atcaacgattcggagtctttcaagaaagccacgtctgctattaaaagaagggattttacg
tggttgcaatttcacagcctacacaacctcctgcagggcaattggattagtgaggaaacc
ctacagatgacattacggaaactagacgagcggttacatcaactttaccaatgtctgcct
gggaagagtttactgattacactaatggctccatcagacacatcatcaaaacagctgggc
agatgctttgttactttaaccaaggagtctttatga
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