Apostichopus japonicus (Japanese sea cucumber): 139960597
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Entry
139960597 CDS
T10891
Name
(RefSeq) TATA element modulatory factor-like
KO
K20286
TATA element modulatory factor
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
Membrane trafficking [BR:
ajj04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
139960597
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
Motif
Other DBs
NCBI-GeneID:
139960597
NCBI-ProteinID:
XP_071815166
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Position
19:complement(13008087..13042498)
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AA seq
1137 aa
AA seq
DB search
MSWFEASAFSSLAKTALVNAQKSIDRVLDIQEDENGSSGVSAAKGKLPNANNLHAAKGKN
SQGSSSGKTSSTNPSRKATPQKQLIDEDNLWSSFLDSGEKKSKPKVTPAKHFQRTPKSRI
TDENKSDGLSTGTRSSGSQALQKTKPQRKQSGKGKNEETKLGEKDGRSKRAAESGSSTTD
DEKVTEGISKRAPLKPEKIAFEQSADRTSAVQVTPEGETNDDSRDGEQETKTEKRLPAVR
EPHKEENEKESDSTQSREIVEQRVSKDGSNSDEPESVKSDSDFVVINDLTQSEHSLCMYD
NRESSDTHSPKHITYSSNGKRSPTDSDYSIISENRFHDMTDNIHGHGPIEVMTNTDEASV
TCSQRTSPAYSADAESEDLDDKSSPSADERGRSGSEADQIREEQIREEGVVTPTPGEEEE
TGTLSISGHTESSLTDVVPDECIEKPPGTEEDDQKEVDKTEEITSEVTQGEDGVQGDSQN
PMHPEKLLKKLADMAEILKAREDQIITLSEQNNQLQDTGTSLKIKLEKLERRREQESEED
LTSLTTEFTERIGMMEKKLHVANKERDSLKKEVQTLKTEITERDTTDQSQRLLAEKDLQI
TALTKEGEKLAKEQLQNSTIIKKLRIKEKENDSLIKSQKEQLEDALKKIEYLEGVIDAKE
EVDKKNKENIRTLNAVVDKQNKELIGCRAEVDESREKIRSTQAALDASYKEIADLHKSIA
AKNSEAHEHNLSSEMNAKEEMRLAMEKLQQGSRREHEGLILQINDLQMSLSRGEQQSNRK
EMNLRQEISDLQQALQDSEQRNQELSHSVTGATRPLLRQIENLQSTFNDQSQTWEQVERN
LTERLADAQAQLAGAVEKERSTTETAMMATSKVSSLESQLALLRQEKSKLLASLEMEKMK
AQSLEEQKDREHSQFESQRHTYIKALEDSQREKDILEKKVQVESLKAEAEKKRAVMAQEA
LEEKERQTEQEKRISPINISGSSTPTRPILTPTLSISSQSEILERSMSISGERLQHDSLM
NGSASTVIENLQSHVKLKEGEVAQLQGEITQLERTRASMAEEIVKLANLNETLEDEVKVV
PELTKKMREIDHKYNAVLQMYGEKAEEVTELRLDIQEIKEMYRQQIEDLLKKDPDRN
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgagttggtttgaagcttcagcattttcttcattggcaaaaaccgcccttgtcaacgca
cagaagtctatagaccgtgtgttggatatccaagaagacgagaatgggagcagtggtgta
tctgctgcaaaaggaaaactcccaaatgcaaacaacctgcatgccgcaaagggtaagaac
tcacagggatcgtcatccggcaagacctcttctacgaacccatctcgtaaggcaacacca
caaaagcaactgattgatgaagataacctatggagttctttcttagactctggtgagaag
aaaagtaagccaaaagtaactccagccaaacattttcagagaactcccaaaagtcggatt
actgacgagaacaaatcagatggcttaagtactgggactcgatcaagtggttcacaagcc
cttcagaaaacaaaacctcagcggaagcagtcaggcaaagggaagaatgaggaaactaaa
cttggtgaaaaagatggccgctccaagagagctgcagagtcgggatcaagcacaacagat
gacgaaaaggtgacagaagggatctctaagagggcgccactgaaaccagaaaagattgct
ttcgagcagtcagctgatagaacttctgccgtgcaggtaacgcctgaaggagagaccaat
gatgattcgagagacggagagcaagaaacaaagacagagaaacgactacctgccgttaga
gaacctcacaaagaggaaaatgagaaggaaagtgactccacacagtcgagagagattgtc
gaacaaagagtttcgaaagatgggagcaattccgatgaacccgaatctgtgaagagcgac
agtgactttgtggtgattaacgatttaactcaaagtgagcattcactatgtatgtatgac
aatagggagtcttcagatacacattccccaaagcacattacgtattcatcaaatgggaaa
cgaagtcccacggacagtgactacagtattatatcagagaatcgtttccacgatatgacg
gacaatatacatggccacggacccattgaagtcatgactaatacagatgaggcatctgtc
acttgctctcagaggacctctccggcatattcggcagatgcagaatcggaggacttggat
gataaatcctctccatcagcagacgagaggggaagatcgggttcagaagcagatcaaata
cgggaagaacaaataagggaggaaggtgtggttactcccacccccggagaggaggaggaa
acagggacactttcaatatctggccacaccgaatcgtctttaacagatgtggttcctgat
gaatgcattgagaagccacctggaaccgaggaagatgatcaaaaagaggttgacaaaact
gaagaaataacatcagaggttacacaaggagaggacggggtgcaaggggattcacagaac
cccatgcaccctgagaaacttttaaagaaattggctgatatggcagagatccttaaagcc
agggaagatcagattatcactctcagtgaacagaacaatcagttacaggatacaggaacc
agccttaaaattaaattagagaaattagagagacgaagagaacaagagtcagaggaagat
ctgacgtcactaaccacagaatttaccgagagaattggcatgatggagaagaaacttcat
gtcgctaacaaggaaagggacagcttgaaaaaggaagtgcaaacactcaaaactgaaata
acagagagagacactacagatcaaagccagagattgctggctgaaaaggatttgcaaata
actgccttgacaaaagagggagaaaaactagccaaggaacagctgcagaattccacgatc
attaagaaattaagaatcaaagagaaagagaatgacagtctcatcaaatcacaaaaagag
caattagaggatgccttgaagaagattgaatatcttgaaggcgtcatcgatgccaaggaa
gaagtggataagaaaaataaagagaacatcaggacgttgaatgctgtggtggacaaacag
aacaaggagctgattggctgtagagcagaagtcgatgagtccagggagaagattagaagt
actcaggctgccctggatgcatcctacaaagaaatagcagatctccacaagagcatagct
gcaaagaacagcgaagcccacgagcataatctcagctcggagatgaatgccaaggaggag
atgagattggccatggagaaactgcaacaaggatccaggagagaacatgaaggattaatt
ctacagataaacgatttacagatgagtctgtcgaggggggagcaacagtctaatcgtaaa
gagatgaatctgcgacaagagatctctgatctacaacaagcactccaggattctgaacag
aggaaccaagagctcagtcacagtgtgacaggagcaactcggccactgcttcgtcaaatc
gagaatctccagtccactttcaatgaccaatcacaaacctgggaacaggtggagagaaac
ttgacagaacgtctggcggacgctcaagcccagttggctggagcagtcgagaaagagagg
tcaacaacagagactgctatgatggccacctccaaggtttcatctttggagtcacagctg
gccctccttagacaggagaaatctaaactcttagcttcactggagatggaaaagatgaag
gcccagtcattagaggaacagaaggatagagaacattctcagtttgaatctcaacgccac
acatacatcaaggccttggaggactcgcaaagggaaaaggatatccttgagaagaaagta
caggttgaatctctcaaagctgaagccgaaaagaaaagagcagttatggcccaagaggcc
ctcgaagaaaaggagaggcaaacagaacaggagaagagaattagtccaatcaacatttct
ggttccagtacccctaccagacccatccttacaccaacccttagtatctcatctcagagt
gaaatcctggagagaagcatgtcgatcagcggggagaggttgcagcacgacagcctcatg
aacggttcggcctcgaccgtgatcgagaacctccagtcacacgtaaaactaaaggaagga
gaggtggcacaattacagggtgaaataacacaacttgagagaacaagggcatccatggca
gaggaaatagtgaagctagccaacctgaatgagacacttgaagatgaagtgaaagtagta
ccagaactcacaaagaagatgagggagatagatcacaagtacaatgctgtcctccagatg
tacggagagaaagcagaagaggtcacggaattaaggctggatattcaagaaattaaagaa
atgtatcgtcaacagattgaagatttgttgaagaaagaccctgaccgtaattga
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integrated database retrieval system
