Apostichopus japonicus (Japanese sea cucumber): 139960702
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Entry
139960702 CDS
T10891
Name
(RefSeq) tonsoku-like protein
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ajj03000
]
139960702
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139960702
Transcription factors [BR:
ajj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
139960702
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
139960702
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
TPR_12
Ank
TPR_1
Ank_4
TPR_2
Ank_5
TPR_7
TPR_8
Ank_3
LRR_NLRC3
CFAP70_TPR_C
TPR_MalT
TPR_10
LRR_TMOD-LMOD
LRR_6
TPR_16
LRR_MHP1-HER1-GIP3
Ank_KRIT1
RPN7
ARM_TT21_C
SUCH1_C
HEAT_Nup120
DUF8817
ANK_LRRK2
MA-Mit
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
139960702
NCBI-ProteinID:
XP_071815382
LinkDB
All DBs
Position
3:4150558..4171066
Genome browser
AA seq
1479 aa
AA seq
DB search
MSGIRKDVQRLEKEKAKAQLSSDLKKEAEICNELGELYVQNGQFEEALKEHQQELQLSES
TNDVVGAAVAHRRIGECHLELGSFQRAVKHHHKHLNLAKSADSYLEQQRALATIGRTHLC
QADVLEGDEQMEALGKSKSAFLGSMRVCENHLQGVVSTKEYHEMRARIFLNLGLVFDYQK
DFNNSVKFIQQATHISEKNHLNEDLLRCHHSLADIYRNAGEFAKSLTLLGKALQITKSMK
NKEKETAILTAQGHIHFQLGDFLAAKKAFKRAYRLGSETDAERLKVTTALQRAIKGCKLE
KMIEQAVRDSNQKERMALEEQFGDLCCKMSSYNEAIQHYKRQLDCALSLEVPPLQLIPIY
VSLAATYADNKQYSSAVEMYSKELKLRSGNPKEECLTWLNVADAQERAGQEYEVLHQSYK
RAVECAETAEITKLQFRALKSLMLVQEHFKEETHLWLSKKKLSRLKEEQNLPSDYEPSSD
EEEEEESNNSLETEDLTLDLSDSGNSEGEQEDFDRPTSSNRAQIAKFSKTNEKGETLLHR
ACIDGNFRQVKSLLEKGHPVNPRDYCGWLPLHEASNHDHYAIVEILIEHGAAINDRGGAQ
CGGITPLHDAISCGNLEVAELLVQKGASVIAKDDNGLSALDTLEKWKEVNMGGLDDDVMR
QSQNLAEQLLNAAQASPAVVSSTPEVPGNSLLNSDLYDNEEDSQSQSQTGTLSQYQIGPL
SQSNKPYGNVSAGIHRKPEDGLRTVSKHPNRSSLSIRSQRDEASSSDEEGELEKEEDIIV
SGISQSQSSELPTMTSFKRNHSCSILGSQKQTSPKPTIANDTLSVSPLMSSESGEVPVRN
TSMAKDTSREDARVVYRTAMDSVGSATSRLTVKKHPGTSVKTSHKTNNKVPLISENDYVA
EDWLIEDLAPSKRRRVDGRDVFREAELNSVGRHEETSRLSRKKRKKQTQLKLTGILHQRP
RNTSERGDSSNDERETEPMVPSSSPMVSQSIDNHHQVAVVSSSPPATASAMRVKVRVVDK
VFLISVPLSSPKTIKWLSEETGNRYYSFSGLRPLITLTTADKALFSPDDVVSEILNNNEE
VLANVESWHMPPLQERYRTLCQKNSQSVHRKIESRLEMQDQHHLDLSSLTLTEGHLKPLF
SALQCQHSLRKLLLARNRINDKVMASLAESLPSLPNLSLIDLSCNEVTHEGLRRVSEVLS
KETTEGVAMDGSSVSKPLQYLEELVLDYNSLTDNCALYIASILKHCPLLNRLSLTSTYIT
KRFFQFNSTALLEAFQGAGHLQSLNVSHNALGSSGVELLLKCLNPESINSLNLGSTIQRT
GDSSIAKHLASFYSKGNCCLHNLNLEDCKLKENDMKTLSKCIPGSLSVSWSHLGLSANPL
ITHRGIHLLLAGLQEAGCGLKSLDLSLCGLESPLEGDMFDLLAGFMSPEHPSGEALAKVV
LSGNKLSKVDLEVLINVWEATHDESAGHCIDKVRCILYA
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaatcagaaaagatgtacaaagacttgaaaaggaaaaagcgaaagcacagttg
agcagtgatctcaagaaggaagcagagatttgtaatgagttgggagagctgtatgttcaa
aatggccagtttgaagaagcccttaaggaacaccaacaggaattacaactctcggaatca
acaaacgacgtcgtcggagcggctgtcgctcaccgaaggatcggagagtgccacctggag
ctcggaagctttcagagagcggtgaaacatcaccacaaacatctgaatcttgcaaagtct
gctgacagttacctcgagcagcagcgtgccctggctacgatcggccgcactcatctatgt
caggcagatgttttggagggagacgaacagatggaagccttgggaaaatccaaaagtgct
tttttggggagtatgagagtttgcgagaaccatctccagggtgtcgtctccaccaaggaa
taccacgagatgagggctaggatatttctcaatctaggtcttgtttttgattatcagaaa
gacttcaacaatagcgttaaatttatccagcaggctactcatatttcagaaaagaatcat
ttaaacgaggatttattaaggtgccatcattcactagcagacatttaccgtaatgccggg
gaatttgcaaagtctctgactctgctggggaaggctctccagattaccaaaagcatgaag
aacaaagaaaaggaaacagccatcctaacagcacaaggacatatccattttcagttgggt
gattttttagctgctaagaaggccttcaaaagagcttacagactgggatcagaaacggac
gccgaaagacttaaagtaactacagccttacaacgtgctattaagggctgcaaactcgag
aaaatgatcgaacaagctgtgagggattctaaccagaaagaaagaatggctttagaggag
cagtttggtgacctgtgctgtaagatgagtagctataatgaagccattcaacattacaaa
agacaactcgactgtgctctgagcctggaggtgccccccctgcagttaatcccgatctac
gtttcgctggctgccacctatgcggacaacaaacagtacagttcagcagtggagatgtac
agcaaggaactcaaactgaggtcagggaaccccaaggaggaatgtctgacttggttgaac
gtagccgacgctcaggaacgagccggtcaggaatacgaggtccttcatcagtcgtacaag
agagccgtggaatgcgctgagaccgcagagatcacaaaactacagtttcgagctttaaag
tcgctgatgctcgtacaagaacattttaaagaggagactcacctctggctctctaagaag
aaactcagtcgtttaaaagaagagcaaaaccttccatcggattatgaaccaagctctgac
gaggaggaggaggaagaatccaacaactctcttgaaaccgaagatctgacccttgacctc
tcagattcaggaaattctgaaggagagcaggaggattttgaccgtcctacatcctccaat
cgagcacagattgccaagttttcaaagaccaacgagaaaggagagacgcttcttcacaga
gcttgtatcgatggcaactttagacaggtcaaaagtctcctggagaagggccatccggtt
aacccgagagactactgtggatggttgcccctccacgaagcaagcaaccacgaccactac
gccatagtggaaatcctcatagaacatggtgcagccatcaatgacagaggtggcgctcag
tgtggtggcatcacacccctccatgatgccattagctgtggcaacctggaagtggcggag
ttgctagtccagaaaggagcatcggtaatcgctaaagacgacaacggtctttcagcattg
gacactctggagaaatggaaggaggtgaacatgggtggccttgacgacgatgtcatgcgg
caatctcagaacctcgctgagcagctactgaatgctgctcaagcttctccagctgtcgtt
tcttcgacaccagaagtgcctggtaacagtttattaaattctgatctctatgacaacgaa
gaagattcacaaagtcagtcacagactggtactctcagtcaataccagattggtcccctc
agccagtcgaacaaaccctatggaaatgtcagtgctggcatacatcggaaaccggaggat
ggccttagaactgttagcaagcatccaaacaggagcagtttatcgatcaggagtcagaga
gatgaggcttctagttcagacgaggaaggagagttagagaaagaggaggatattatcgta
tcagggattagccaatcacaatcaagtgaactgcctaccatgacatcattcaagaggaac
cactcgtgctctattttgggctctcaaaagcaaaccagtccaaaaccaacgatagctaac
gacactctgtcggtgtccccactgatgtcctccgaatcaggcgaagttccagtcagaaac
acaagtatggcaaaggacacttcccgtgaggatgcgagagtcgtctatcgtacggccatg
gacagcgtgggtagcgccaccagcagattgacggttaagaaacatccagggacgtccgta
aaaactagtcacaaaaccaacaacaaggttcccctcatatcggagaacgactatgtagcg
gaagattggttgatagaggatttggcgccctctaaaaggcgtcgtgtagatggcagggat
gtattcagggaagccgaactaaacagcgtcggtagacacgaggagacttcaagattgtcc
agaaagaagaggaagaagcaaacccaactgaagttaacaggaatcttacatcagaggccg
aggaacacgtccgagaggggagattcgtccaatgacgagagagaaacggaaccgatggta
ccttcctcgtcgccgatggtgtctcagtcaatcgataaccaccaccaggtggcggtggtt
tcatcttcgccgcccgcaacggcttcagcgatgcgagtcaaagtcagggtggtggataag
gtgtttctcatctcggtgcctttgagttcacctaaaaccatcaagtggctctcagaagag
acggggaacagatactattcattctcgggattgagacctctgatcaccttgacaacggca
gacaaggctctcttttctccagacgacgtcgtgtctgagatactcaataacaacgaagaa
gttcttgctaacgtcgagtcctggcatatgcctcctctccaagagagataccgtacgctt
tgtcagaaaaacagtcagagtgtacatcgtaagatcgagtcaagactagagatgcaagac
cagcaccaccttgacctttcatctttgaccttgacggagggtcacctcaaaccactcttc
tctgccctacagtgtcagcattccttacgtaagcttctgcttgcacgtaaccgaataaac
gacaaagtgatggcctccctggcagagtctttgccctctctaccgaacctttctctaatt
gacctctcctgtaatgaggtcacccatgagggcctacggagggtgagtgaggtcctatcc
aaggagacaaccgaaggcgttgcgatggatggttcctcggtttcaaagcctttacagtat
cttgaagagttggttcttgattacaattcgttgacggacaattgcgccttatacatagct
agtattttgaaacactgccctctattaaacaggctcagtctaacgtcaacttacatcacc
aaacgcttcttccagtttaacagtactgcattgcttgaagcttttcaaggggccggacac
ctgcaatctttaaatgtatctcacaatgccctgggttcctcaggtgttgagctgttgttg
aagtgtctgaatcctgagtcgatcaacagtctcaacctcggctcaacgattcaacgtacc
ggagactcaagtatagcaaagcacttggcctcattctacagtaagggtaattgttgtctg
cacaatcttaatctagaagactgtaaactcaaggaaaatgacatgaaaaccctgtcaaaa
tgtatcccaggttcattgtcagtaagctggtctcatctaggtctctctgccaaccccctc
atcactcatagaggtatccatctcctgctagctggccttcaagaggcaggatgtggctta
aagtctctggacctctccctgtgcggactggagtcacctctagagggagacatgttcgat
ctattagcgggattcatgtcaccggagcacccttcgggagaagccctcgcaaaagttgta
ctctccggaaacaaattaagcaaagttgatttggaggttctgatcaatgtttgggaagcc
acacatgatgaatcggctggacattgtattgataaagttagatgtatcctctatgcttaa
DBGET
integrated database retrieval system
