Apostichopus japonicus (Japanese sea cucumber): 139960839
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Entry
139960839 CDS
T10891
Name
(RefSeq) succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial-like
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00020
Citrate cycle (TCA cycle)
ajj00640
Propanoate metabolism
ajj01100
Metabolic pathways
ajj01200
Carbon metabolism
Module
ajj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ajj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
139960839
00640 Propanoate metabolism
139960839
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ajj04147
]
139960839
Enzymes [BR:
ajj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
139960839
6.2.1.5 succinate---CoA ligase (ADP-forming)
139960839
Exosome [BR:
ajj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139960839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Peripla_BP_3
Motif
Other DBs
NCBI-GeneID:
139960839
NCBI-ProteinID:
XP_071815540
LinkDB
All DBs
Position
20:11607694..11616891
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AA seq
425 aa
AA seq
DB search
MAAVSQFLRSSKCSLSLLNGKAQALSAIPARWLNLQEHHSKELMAKYGVTVQRFKVADTP
HDAVQVGKDLKAKELVLKAQILAGGRGKGTFSSGLKGGVHLTKNPDDLGPLVEQMIGHKL
KTKQTPGDGVLVQKVMVAQALDISRETYLAILMDREKMGPVIVGSPEGGVDIEEVAEKTP
ELIFTEAIDITAGIQDEQAMRMADNLKFTGPLQRVAADQIKNLYQLFLAVDATQVEVNPF
GETPDGEVVCFDAKINFDDNAKYRQEEVFALDDKTEGDEREKMAEIHNLNYIGMDGNIGC
LVNGAGLAMATMDIIKLHGGEPANFLDVGGGVQEKQVLEAFKLISSDTKVKAILVNVFGG
IVDCSTIANGITSACRQMELKVPLVVRLAGLNMEKASKILKESGLPIKTATDLGDAAEKA
VACLR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtcagtcaatttttgaggtcttctaaatgctcgttgtctctattgaatgga
aaggcacaggccctatcagctatccctgcaagatggctgaatttacaagaacatcacagt
aaagagctgatggccaaatatggagtgacggtgcagagattcaaagttgcagatacgcct
catgatgctgtacaagtaggaaaagacctaaaagccaaagagttggtgcttaaagctcag
atcttagctggtggtagaggtaaaggaacattctcaagtggcttgaaaggaggagttcat
ttgaccaaaaacccagatgacttgggaccattagttgaacagatgattggacacaagttg
aagacaaagcagacacctggcgatggtgtcctcgtccagaaggtgatggtggcccaggca
ctagacatctctagagagacttacctcgccattttgatggaccgggagaagatgggtcca
gtcatagtcggaagtccggaaggtggcgtggacattgaagaagttgccgaaaagacacca
gagttaatctttaccgaagctatagatattacagccggtatacaggatgaacaagctatg
agaatggctgataatttaaaatttaccggaccacttcagagagtggctgctgatcaaatc
aagaatttatatcagctcttcctggcagtagatgcaactcaagttgaagtcaacccattt
ggagaaacacctgatggtgaagtcgtttgtttcgatgccaagatcaattttgacgacaac
gccaagtatcgtcaggaggaggtctttgcattggacgacaaaacagagggtgacgagaga
gaaaagatggcagaaattcacaacctcaactacattggaatggatggaaacattgggtgc
ttggtgaatggtgctggcctcgctatggcaaccatggacatcataaaattacacggtggg
gagccagctaacttcttggacgttggaggaggagtgcaggagaaacaagtcttagaagct
tttaaattaattagctccgatactaaggttaaagccatcctcgtaaatgtatttggtggc
atcgtggattgttcaaccattgctaatggtatcacgtccgcctgtaggcagatggaactc
aaagtgcccttggtggtcagattagcaggtttgaacatggagaaagcatcgaaaattttg
aaagagagcggccttcccatcaaaactgccacagatctgggagatgccgcagagaaagcc
gttgcctgtctcagatga
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