Apostichopus japonicus (Japanese sea cucumber): 139960857
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Entry
139960857 CDS
T10891
Name
(RefSeq) pre-mRNA-splicing factor 18-like
KO
K12817
pre-mRNA-splicing factor 18
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139960857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajj03041
]
139960857
Spliceosome [BR:
ajj03041
]
Complex C
Other components
Step II factors
139960857
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
DUF4252
Motif
Other DBs
NCBI-GeneID:
139960857
NCBI-ProteinID:
XP_071815589
LinkDB
All DBs
Position
20:25151333..25158426
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AA seq
337 aa
AA seq
DB search
MDFLKAEIARKKRQLEQDVESTTSKKTFFKRGDLMTKQREEYLSRYKKDEVEDPAAEVGP
SRKRLESTDQDATEVTYSRQEVIRGLRERGEPIRLFGETNSEAFYRLRRIEMLAPEVNKG
LRNDFKDAMDKVDQQYLEEMVKGHGEDENTKAYDIKLHEDGTTMEELLELSQQVGTEEND
NKLVTKFIRFLQTRWAEDLNSRQTDEKRNMKGKLQTATYSQTSAYLEPLVRKLKRKTLPP
DLLDSLVQIVKFMLEREYVKANDEYLQMAIGNAPWPIGVTMVGIHARTGREKIYSKNVAH
VLNDETQRKYIQGLKRLMTMCQRLFPTDPSKSVEYHA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctgaaggctgaaatagctagaaaaaagcgacaactggaacaagatgttgaa
tcaacaacaagcaagaaaactttcttcaaaagaggggatctcatgactaagcagagagaa
gagtacctcagtcgttataagaaagatgaagtcgaggatccagcagcagaagttggccca
tctcggaaacgattagaatctacggatcaggatgcaacagaggttacttactccagacaa
gaggttattcgaggactaagagaaagaggagaaccaatcagattgtttggagaaaccaac
tctgaagcattttatcgtctcagaagaattgaaatgttagccccagaggtcaacaagggt
ctgaggaatgacttcaaagatgccatggacaaggtagaccagcagtatcttgaagaaatg
gtgaaaggacacggtgaagatgagaacaccaaggcttatgatattaagctacatgaagat
gggaccaccatggaagaattactcgagctatcacagcaagttggaacagaagaaaatgac
aacaaactcgtgacaaagtttatcaggtttctccagacaagatgggctgaggatttaaac
tcaagacaaacagatgaaaagaggaatatgaaaggaaagctacaaacagcaacttacagt
cagacatctgcttatttagaaccattggtcagaaagctcaagagaaagactctaccaccg
gatttactggatagcttggttcaaattgtcaagtttatgttggaaagagagtatgtgaag
gccaacgacgaatacctacagatggccattggtaatgcaccatggcccattggtgtaacc
atggtgggcatccacgcaagaactggaagagaaaagatttactcaaagaacgttgctcat
gtgttgaatgacgaaactcaaaggaaatacattcagggactgaagagactaatgacaatg
tgtcagcgattattccctacggatccgtccaagagtgtggaataccatgcatga
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