Apostichopus japonicus (Japanese sea cucumber): 139960859
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Entry
139960859 CDS
T10891
Name
(RefSeq) protein polybromo-1-like isoform X1
KO
K11757
protein polybromo-1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139960859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajj03021
]
139960859
03036 Chromosome and associated proteins [BR:
ajj03036
]
139960859
Transcription machinery [BR:
ajj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139960859
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
139960859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
Zap1_zf1
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
139960859
NCBI-ProteinID:
XP_071815593
LinkDB
All DBs
Position
20:27819596..27861902
Genome browser
AA seq
1906 aa
AA seq
DB search
MMSKRRRSVASTDSKDDEETSVAPPLTSPTSLKRRKKSGTDQAVLIQDLYSILRNYKNED
GRLLCEAFFRLPKRRTVPEYYEIVTDPIDMLKIQQRMKMEEYNTVGQMITDVELLVKNAQ
DFYKKTSQEYKDACELWEVFHQNIPGGAQPADDNTEPITFVMPDISPKIKIAESPKSPIV
VLRRQDCSWESKPVDESSEEDDEDDDEEEEESEEKTHSKVTPDEDISRIGEYTLEDPSDP
LEHLYTSVFAHQDTSKRFVSLLFRKLPPKSQFPDYYEVIQDPIDLKDIAKKLKSGQYSNL
DALEKDLLLMVNNAKAFNEPGSQVYRDSYTLRRVISGRKNELEKLLSRGPLQSRPSDKSK
PGTSALSEALALPSDDEEEDVVEEEDEEEDEEEEEEEEEEEEDEEEEEDEEEDDTVVEED
EEDEMEYEDADESGDESLLSDTNDNLHQLFGTVINFKNAAGQVISEPFMRLPSRRTYPDY
YQEIKEPMALCKIRTKIKGCKYESLQEMVLDMDLVFNNAKQYNMPNSRLYKDADRLQKVM
LTRCKELESIKKEFESDDEGSSKRKNARRDAMRTNMMSMYESLVECKDDTGRALITMFME
KPSKKEYPDYYQVITDPVDMKMIEVNILMDKYPSEEALLVDFDTMFSNARHYNEEGSMIF
EDANQLEKVLKKKCKEMNISVPDFQIGKGLRKSPSKKTTKALSPLAQKLQELYSTIKDYK
DTTGRELATPFIRLPSKNEYPEYYQVIKRPIDMQRIQQRILSKQYEQLDDMVNDFLLMFD
NACKFNEPDSLIYKDALTLQRVLLQTRTELSGDETSGVPDVQGIIREILTSLLVSVANHQ
DEEGRCFSDSLAEVTVEKSEKDSEPETPQNAQRKPLDLDMVRHYLDKGCYKRLDIFQDHI
FEVFERARGLTRTDSQVFEDSLELQKFFINIRDEICKNGEILLSPALSYTHRHMQNDIET
QKAEKLPRELKEDAERKEDDSKGKSTYQSGDGEDKQEEDVSDGLVIQGQTYRVGDFVYVE
PSEKQLKPHIVCIEKLWRDPDGEGWLHGNWFLRPNETFHLATRKFLEKEVFKSDYFNKVK
ISQHVIGYCFVMFVKDYFKMKPEGFTNDDVYVCESRYSAKAKAFKKIKLWSVPQSNQKII
NRDEPLSKVRVASVFAGAQRPNELLDQTGEHFHPFDKDKEDVEIEIPEEEKNSNIYYEQI
NYQGRCYKLGDSLYVGLLDRKRPIITRMDKIWKDTVNNEYFFSGPTFLRPSEVEHAPTRM
FYKNEVFLSSSDEEVFAFKVILKKCAVVPFKDYLTSRLTEFKESDVFVCESQYKEQEQLM
RKIKALKKYSVSNKVIDDEIYFFKKPITPLKEPSPLLQPEVEDEEEAAAEANEAEDEQTE
TSSVASTPKAPKKNRSASGFILFASEIRAQVKDSNPNKSFGEISRLCGLEWHKLTAEDKV
RYEERAAILAESRPPKPPRKGADSPAPQPVAPPGMYTVYECMWEGCDYQYETSEDLVHHL
LETSGHLQGGNNGETEFPCKWKGCTRYKRNQPFPVFSRLVRHCKEVHVKNSVKHVYPHQM
SRNYFPRYQQQGMQNHQPGGAIMGIVGPPTPVGMATQQLTQNTPRFQGNYNAGMQDPSGQ
QMQQQPGPYHQMPPYSQQQQYPGQQQYPPQQQGYAPQQQGYPPQQQGYPPQQYPPQQQQY
PPQQQPYPQQQQGYPQQPHMQGPSHMQQQQPPQTSQPQNMPPGPPPPHPGVQHPQQAMVR
PMHPMSHPVPHHMLPNVMHPAAQGQMKPMLPGAHGMVPSSLPSQPSLPPQPMFVTPPAKT
QRLLHSEAYIRYIEGLNLKSGSISDWRRSLSAKEEHSNLTEQQKARLPSHWFANRQDGDV
VKAMWKLRDLLMQDTLRMEQDQDLFDKDNEEVNVQTEPPQSLPDPL
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaaaaaggagacggtctgtagcctctacagattcaaaggatgatgaggaaacc
agcgtagcacctcctcttactagtccaacatccttgaagaggcggaaaaaatctggaacg
gaccaggctgtgcttattcaagacttgtacagcattcttcgcaactacaagaatgaggat
ggaaggttactctgtgaggcgttttttcgacttcctaagagaaggactgttcccgagtat
tacgagattgtaaccgatcctatagacatgctaaagatacagcaacgtatgaagatggaa
gagtacaatactgtaggtcagatgatcacagatgttgagttgttggtcaaaaatgcacag
gacttttataagaaaacatcacaggagtacaaagacgcatgcgaactctgggaagtattc
caccaaaacattcccggtggggctcagccggctgatgacaatactgagcctatcaccttt
gttatgcccgatatctcacccaaaattaaaatagctgaatcacccaaatcccctatagtt
gtcctgcgtcgtcaggattgttcttgggagtccaagccagtggacgaaagcagcgaagag
gacgacgaggatgatgatgaggaggaggaggagtccgaagaaaagacacacagcaaagta
actccggacgaagatatttctcgaatcggtgaatacactctggaggatccgtctgacccc
ctggagcacctctacacgtcagtgtttgctcaccaggacaccagcaagagatttgtcagc
ttgttgttcagaaagttgccaccaaaatcacaattcccagactactatgaagtcatacaa
gatcccatcgatcttaaagatattgccaagaagctaaagagtggtcagtattcgaatctt
gatgcactcgagaaagaccttctgttgatggtgaacaacgccaaggcgttcaacgagccc
ggatctcaagtttacagggactcgtacaccctccggagggtgatcagtggtcggaagaat
gaactggagaaacttctctctagaggtcctcttcagtcgagacctagcgacaagagcaaa
ccaggcacgtcagccctcagcgaggcgctagcccttccatctgacgacgaagaggaagat
gttgtggaagaagaggatgaggaagaagatgaagaagaggaagaagaggaggaggaggaa
gaagaagatgaggaggaggaggaagatgaggaggaggacgatactgtggtcgaggaagat
gaggaagacgagatggagtacgaggatgcggacgaatccggcgatgagagtctgctctcg
gacaccaacgacaacctccatcagctgtttggcaccgtcatcaacttcaagaatgccgcg
gggcaggttatatccgagccgttcatgaggctacctagcaggaggacctatccagattat
taccaggagatcaaggaacccatggcgttgtgcaaaatcaggaccaaaatcaagggctgc
aagtatgaaagtcttcaggagatggtgctggacatggatctggtatttaataatgccaaa
cagtacaacatgccaaactctaggctgtacaaagatgcagacagactccagaaagtcatg
cttacaagatgcaaggaactggagtccatcaagaaggagtttgaaagtgatgatgaagga
agcagcaagagaaagaacgcaagaagagatgctatgaggaccaacatgatgtccatgtac
gagagtctggtggaatgtaaggacgacaccggtagggctctgatcaccatgttcatggag
aagccttccaagaaggagtaccctgattactaccaggtcatcacagacccagtagacatg
aagatgattgaagtcaacatactcatggacaagtacccttcggaggaggccctgctggtg
gactttgacaccatgttctccaacgcccgtcactacaacgaggaaggctccatgatcttt
gaggacgcaaatcagctcgagaaggtcttgaagaagaagtgcaaggaaatgaatatatct
gtcccagacttccagattgggaaaggtttgagaaagtcaccttccaagaagacgaccaaa
gctctaagtcctctggcccagaagctgcaagagctgtacagcacaattaaggattacaaa
gacacgactgggagggaacttgccactcctttcatccggctaccatcgaaaaatgagtac
ccggaatattatcaggtgattaaacggcccatagacatgcagcggatccaacagaggata
ctatccaaacagtacgaacagctcgacgacatggtcaacgacttcctcctcatgttcgac
aacgcctgcaagtttaacgaaccagattcccttatttataaggatgctctgaccttgcag
cgagttcttctacaaaccaggacagagctctccggggatgaaacgtccggagtaccggac
gtccagggtatcatccgtgagatactgaccagtctcttggtgtcagtcgccaaccaccag
gacgaagagggacgttgcttcagcgactcactggctgaagtaacggtcgagaaatcagag
aaggactccgaaccggagacgcctcagaatgcgcaaaggaaaccgttggatttggacatg
gttcgtcactaccttgacaaaggctgctacaagaggctggatatctttcaggaccatatc
tttgaggtgtttgagagggccaggggtctgaccagaacagattcacaggtctttgaagac
tccctggaattgcagaaattcttcatcaatatcagggatgaaatctgcaagaatggtgaa
atccttttatctcctgcgctgagctacacgcacagacacatgcagaatgacatcgagaca
cagaaggcagagaaacttcctcgtgagttgaaggaggacgcagagaggaaagaggacgac
agcaaaggaaaatccacctaccagtctggagatggggaggacaaacaggaagaagatgtt
tctgacggtttggtaatccaagggcagacgtatcgtgtgggagatttcgtctatgttgag
ccgagcgagaaacaactcaagccccacatcgtctgtatcgagaaactgtggagggacccg
gatggggaaggctggttacacggtaactggtttctgagaccaaatgagaccttccatctg
gccactcgaaaatttctggagaaggaggtatttaaaagtgattatttcaacaaggtcaag
atctcccagcacgtgattggctactgtttcgtgatgttcgtcaaggactacttcaagatg
aaaccggagggcttcaccaacgacgacgtctacgtctgcgaatctcgttactctgccaaa
gccaaagctttcaagaagatcaagctttggtccgtgcctcagagcaaccagaagatcatc
aatcgagatgagcccctctctaaagtgcgggtggcatcggtgtttgccggagcccaaagg
cccaatgaattgctggaccaaacaggggaacactttcatccctttgataaggacaaagag
gacgttgaaattgaaatccctgaagaagaaaaaaattccaacatttattacgaacaaatc
aactaccagggcaggtgttacaagctcggggactccctctatgtaggtctgttggacagg
aagagaccaatcatcactaggatggacaaaatctggaaggatacagttaataacgaatat
ttcttctccggaccgacgttccttcgcccgtcggaggtcgagcacgcaccgacacgtatg
ttttataagaacgaggtgtttctgagcagtagtgacgaagaggtctttgcgttcaaagtc
atcctgaagaaatgcgctgttgtgccattcaaagattacctcaccagccgtctgaccgag
ttcaaggagagcgacgtcttcgtctgtgaatctcagtacaaggaacaggagcaactgatg
cgtaaaatcaaagccttgaagaagtattccgtgtccaataaggtgatcgacgacgaaatc
tacttcttcaagaaaccgatcacaccgctgaaggaaccgtctccgctcctccaaccggaa
gttgaagacgaggaggaagcggctgcggaagcaaacgaggccgaagacgagcagaccgag
accagctctgtggcttccactcccaaggcacccaagaaaaatcgatcggcgagtggcttc
attctctttgccagtgaaatacgagcccaggtcaaggactccaaccctaacaagagcttt
ggtgaaattagtagactctgcggtctagagtggcataagctaactgccgaggataaagtc
cgatacgaagagagggctgccattttagctgagagtcgaccaccaaagcccccacggaag
ggagccgattcccctgccccccagcccgtggcccctcctggtatgtacactgtctacgag
tgtatgtgggagggatgcgactaccagtacgagacgtccgaagacttggttcatcatctg
ctggagacgtctggacatcttcagggaggcaacaacggcgagacagagtttccttgcaag
tggaagggttgcaccagatacaagcgcaatcaacccttccccgttttctcaagactggtg
cgacattgcaaagaggttcatgtcaagaactcggtcaaacatgtctaccctcatcagatg
agcaggaattactttccacgataccagcaacagggtatgcaaaatcaccagcctgggggc
gccatcatgggaatcgtcgggccccccacacctgtcgggatggctacacaacagctcaca
caaaatacaccgagatttcaaggtaactacaacgccggtatgcaggatccctcgggacag
cagatgcaacaacaacctggaccctaccaccagatgcctccgtactcccaacagcagcag
tacccagggcaacagcagtatcccccacaacaacagggatatgccccgcaacaacagggg
tatcccccacaacaacagggatatcccccacaacagtacccacctcagcaacaacagtac
cctccacaacaacagccatacccccaacagcaacagggttatccccaacaaccccacatg
caaggaccctcccatatgcagcagcagcaacctccccagacctcacagccccaaaatatg
cctccaggaccaccccctccccaccctggggtgcaacatccccaacaagctatggttcgt
cccatgcaccctatgtctcaccctgtaccccaccatatgttacccaatgtgatgcaccct
gctgctcagggccaaatgaaaccaatgcttccaggtgcgcatggtatggtaccttcttca
ctaccatcacaaccctccctccctcctcaaccgatgtttgtgacccctcctgccaagact
caacgactccttcactcagaggcctacataaggtacatagaaggcctaaatttgaagtct
gggagtataagtgactggagacgtagtctatccgccaaggaggaacattccaacctcacg
gagcaacagaaagctcgcttacccagccactggtttgccaacaggcaagacggcgacgtg
gtcaaagccatgtggaaattacgagacttgttaatgcaagacacactacggatggaacaa
gatcaggacctatttgacaaggataatgaagaagtgaacgttcaaacagagccacctcag
tcattaccggatccactttag
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integrated database retrieval system
