Apostichopus japonicus (Japanese sea cucumber): 139960900
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Entry
139960900 CDS
T10891
Name
(RefSeq) rotatin-like
KO
K16484
rotatin
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
Cilium and associated proteins [BR:
ajj03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139960900
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SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139960900
NCBI-ProteinID:
XP_071815674
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Position
3:4475335..4531328
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AA seq
2193 aa
AA seq
DB search
MYPLRNDVDLSLIIKKLGHDVEEIRVRTLKNLLSKLELKLLYEEDVIQEQSLLIRLLEWF
NFPSCSMQTEVLQLIKTLSKHASASELFVRIGAVEFLSELRQDLDPHIQNEVDDILENLF
KLPESDKPSKEVTIRRFSEECHYYPKTTELSDSSPGVIQDPIFDSPLSYFSPEAKHGPSF
QEQTQGLSISLGGMRGVLFSTFPWLMLTPTDKHVLSSTNNSLCSSRQDVVKTSCDFLCDV
VLQDFPAEIFLQRPHIIKSLLSILALRPPQLEDQSLILKAISCLSDLCRYLCERYHFYHD
PDLYCPKQEFGVSQTQSNASSSQGLPSQSTSQSNLSSNSRPSVIGHQGPRVGGDGKDWDS
PSLDSPSAHSEAESEDPVSLQFSQVTLPQFCVDVLQRTLSIYQDFTGLDVSSRALPLVWR
VVRLIKLSISSEIWSETGLSGRALIEKLNDSLELLANILIQSNHNLQQTSERSEVIERYL
SYVSLIAVTVELTVGIVPHSMSSSVLPESLLSSFYQIVTNPFISECLPRVRALLLPYLKE
GNVQLLKTYEDCETVCEATTKAAEFLRSHREGGDITKLLSLGELSLPALMFPETLPVVEK
FVLLCSTRDADLNQPEQTEKLLLKFLLNPSTAQHALNSCRSIVEESLNVSQAKDPSCKAS
HNVRFLLHPSILKSLAEQLSGHNDTMKEAALSILLHLLTGKLLMVTDVWNQFITTCGPSL
ALIQAQAYRDITLQHAVRALLIDDIRQETKSLTHLQHLRVSLRFLLMKDSRERTDLARFV
MKYLKDERDGENKLPPRSLMIPEQISMLLLMEKPLPLEEDVGRSVFQVESLVQMFSIFKS
SDTDESLRKSSADQLGIILQDRSLHQAFLSQDGPEIILEKINLLLQKKRDTQGVPEFLGS
CGHILRLVVHHNPKLRHELSGQMSIYLMLLRCGLLCQRDDKARRDFCHLLSLLLFDEIAG
VMLSDDGGSEDKFCLPVSVKTGYQLPFSVPTWRRLDGSSPRYPQLPQDDPLALQAVKVSW
ALGVHQGCDKFTKGLMAGLEMDMSPELGLSETEKVLLLYSHRSSAVKLTLRGIRTATSHY
GVKQSLWQLAHWLSMEGFTLNREEEEVVCKNVCETLVQEDLLGILQRFFEVTPANPDDEV
LLREIFHFLTVFLDCCPDSNPTDHFINKLKAHMQDKTPLLELLGQSAEVKPLIEGSAEPD
KKNRKSGLLKQVLEFVSVFVQNLEQSYEAWMSSGQFIGSSLVSKLLHGLHLADEFHYYDL
PSLEATLRCLMHITARSGWSLDWSEGDSYTLCQQMLRSLLEVVSAFHIGRGGIAISFMGK
GVTRNASICLLHLSHEMSIRAPDKNWPIEWAHEIPGSTSPGLQWLVPLWSYRDPEVRASG
LGIAVNLASTIQGCLYLSRCHEDLPGTLWTTILAIVTDHSECSVVRKQAVNLLIHLLSHP
LSGSTEEKPPSEDDWVGPRLVNQETQVSVSGKAALLALLNYFHLVPNVITILSYFYPQCT
IQPVSVVDNSSTGSTRSTSGPSTATTPDNLTSGQIGQRSDGYQVISPVLSEQSSTVPLIA
ASFQNEDGPQPSTLSSEGTIVAPRTERAPSSVGYLSVVTPCLVASVCSLLNQLTVLLPDN
SILSNGKSEIIKLITGILDPNKAQSLSLATTALPSSSSSSSSSSSSLAAIQYLRMCSRGL
DLAIIWLDKDTDVTKLLSRTFQLLHIKFEKVKDQGVKTNLHRLIETCFNFLTVCIQRGKE
EEVLEISRLHMTHITATMAYLLKFSVPCSSRLSSFTYLAHLLAVDKANEPSGPITEVLEA
KQEDGKTQGAVLCDLLLSSYDGTAPPCLDHVQHERTALVAAFKNLSAVSKSAKQTALEAG
FVETLIEEMKRCHAKLAAENLLPVKKRNKKKEGSLLKQINTCVVILQNLMFNNQDMKVAV
KQAGFAQVLFKLWAWIQSTKSLQASVLSALTVYTSHCITACISLTRSSSGQTTGIILNYL
IKSAARNPPDQKVFRVITNCLWCDESRNIVWKSGFLSNLGKFQSLSFKSSKSQQLIHSAI
LWLKLLAVFTFSSDGQQMAMKVKDILELLIEFSKWPQNEISHLAILVIHNLCFLGANKNK
MLSNEALLPVLLAKFDNGDLREQFLVTSALWSAVHGNRKVKSKLKAHNLQVRSREKLVNV
KRNIQKPISDQGERDLMVKHESVLTCLLRLLDD
NT seq
6582 nt
NT seq
+upstream
nt +downstream
nt
atgtatcccttgcgcaatgatgtcgatttgagtttaattattaaaaaacttggtcacgat
gttgaagagattagagtcaggactttaaagaatttgctgagcaaactggaactgaagtta
ttatatgaagaagatgttattcaagaacagtctttgctgataagactgttggaatggttt
aacttcccatcatgctctatgcagacagaagtattacaacttataaagacattgagcaag
catgcttctgccagtgagttatttgttcgcatcggggcagttgaatttctctctgagttg
agacaagaccttgaccctcacattcagaacgaagttgacgatatcttggagaatctgttt
aagcttcctgaatctgacaaaccgtctaaggaagtgacaatcagaagattcagtgaagaa
tgccactactatccaaaaacaacagaattgtcagattcttcacccggtgtgatacaagac
cctatatttgattctccactgagctacttctctccagaagccaaacatggaccttctttc
caagaacaaactcaaggtctctctatatcacttggaggaatgaggggtgtcctgttttca
acatttccctggctgatgctgacacctacagataaacatgtattgtcatctacaaataat
tctctgtgcagctctcgccaggatgtggtgaaaacttcctgcgacttcttatgtgatgta
gttctacaagatttcccagctgaaatattcctacagaggcctcatattatcaaatcactc
ttgtcaattttagctttaagacctccacaactagaagaccaatcattgatcttgaaagct
atcagttgtctgagtgacctttgtcgttacctctgcgaacgatatcacttctaccacgac
cctgacctctactgcccaaagcaagagtttggagtttctcagacacagtcaaatgcctcc
tccagtcaaggtcttccatctcagtcaaccagccaatcaaatctcagctccaattcaagg
ccttccgtgattggtcatcagggacccagagtaggtggcgatggaaaggattgggactct
ccgagtttagattctccatcagcgcattcagaggcagagagcgaggaccctgttagtctc
cagttctctcaagtcactcttccccagttctgtgtggacgtcttacagagaactctctcc
atttatcaggactttaccggtcttgatgtctcgtccagagctctccctctcgtctggcgg
gtcgttcgtttgattaagttgtccatttcatcggagatctggagcgaaactggtttatct
ggtagagcgttgattgagaaattgaatgacagcttggaactgctggcaaacattttgatt
cagtccaatcataaccttcaacaaacctctgaaaggtcagaggtcatcgagaggtatctg
tcttacgtatcattgatcgcagttacagtagaattgacggtcggcatcgttcctcactct
atgtcgtcgtctgttttaccggagagtttactgtcctccttctaccaaattgttacaaat
ccgttcatatcggaatgtttgcctcgtgtgagggcgctgttgttaccctatctgaaggag
ggaaacgtccaacttcttaaaacttacgaggattgtgagaccgtctgcgaagcaaccaca
aaggcagccgagtttctcagatcacatcgagaaggtggtgacatcaccaaacttctttct
cttggggagctctccctgcctgcattgatgttccctgaaacacttccagtcgtcgaaaaa
tttgtgttgctctgttcgacgagagatgcagacttgaaccaacctgaacagactgaaaaa
ctactcttaaagtttcttctaaatccttcaacagctcagcacgccctgaactcatgtcga
tcaatcgttgaggaatctctgaatgtttcccaagccaaggatccaagctgcaaggccagt
cataacgtcaggttcttgcttcatccatctattctgaagtctttagccgaacagctttct
ggtcacaatgacacgatgaaagaggctgcccttagtattctgttgcatctactgactggg
aagttgttaatggtgacggatgtctggaaccaattcatcaccacatgtggtcccagtctg
gccctcattcaggcgcaagcttacagagatattaccttacaacatgcagtgagggcgctg
ttgattgatgatatccgtcaagaaacgaagagtcttacgcacctacagcatttgagagtg
tcgttaagatttctcctcatgaaggacagcagggaaagaacagacctggcaaggtttgta
atgaaatacttgaaggatgagagagacggcgagaataagcttcctcccaggtcactcatg
atcccagaacagatcagtatgctcctactgatggagaaacctctgcctctggaggaagat
gtcggccgatccgtttttcaggtggagagtctagtccagatgttcagtatattcaagtcc
tccgataccgatgagagtctaaggaagtcctcagccgaccagcttggcattatcctacag
gatcgcagcctgcaccaagcatttctatctcaggatggaccggagataatcttagaaaag
atcaatttgttacttcaaaagaaaagagacacccaaggtgttcctgaatttcttggatct
tgtggtcatattttgcgacttgttgtccatcacaaccctaaactaaggcatgaactctct
ggtcagatgtccatctacctgatgttactgagatgtggtttgttatgtcaacgagatgac
aaagccagacgtgacttttgtcatcttctcagcctgctcttgtttgatgagattgctgga
gtcatgttatcagacgacggaggatcagaagataagttctgtttacctgtctcagttaaa
actgggtatcaacttccgttctctgttcctacatggaggaggctcgatggatcgtcacct
cgttacccacagctaccccaagatgatccgttggccctccaggctgttaaggtatcctgg
gccctaggggtccatcagggatgtgataagttcaccaagggcctgatggctggcctcgag
atggacatgagtcctgagcttggtttgtctgaaaccgagaaggtccttctgttatactcg
caccgatcatcagctgtgaaattaactcttagagggattagaacagctacctcccattat
ggagtaaaacagtctctatggcagcttgctcattggttgtctatggaagggttcactctt
aatagggaagaagaagaagtcgtttgcaaaaatgtatgtgaaactctggtgcaagaagat
ttactcggaatacttcagagattctttgaggtgactccagccaatccagatgacgaggtg
ctcttacgggagatctttcactttctaacggttttcttggattgctgtccagactccaat
ccgaccgatcacttcatcaataaactgaaagctcatatgcaggataaaactcccctgctg
gagctcctcggccaatctgccgaagtcaaacccctgatagagggcagcgcagaacctgac
aaaaagaacagaaaatctggccttttgaaacaggtcttagagtttgtgtcggtttttgtt
cagaaccttgagcagtcctatgaagcctggatgtccagtggtcagttcattggcagttct
ctggtcagcaagcttcttcacgggttgcacctcgctgacgagtttcattactacgacctg
ccctcactggaagcaactttaagatgtctgatgcacatcacagccaggtcaggatggagt
ctggattggtcggaaggggacagttacactctgtgccagcaaatgttacgttcacttctt
gaggttgtgtctgcctttcatatcggccgagggggtattgccatttcattcatgggtaaa
ggagtgaccagaaatgcatccatttgtctgctacatctatctcacgagatgagtatcaga
gcgcctgataagaactggccaatagaatgggctcatgaaattcctggatcgacttctccg
ggccttcagtggctcgtaccgttgtggtcttacagagatccagaggtgagagcttctggt
ctagggattgcagtcaatctggcctcaacgattcagggctgtttgtacctctccagatgt
catgaggacctaccagggaccctctggaccaccatactggctattgttaccgatcattct
gagtgcagcgtagtcaggaagcaggctgtcaatttattaatacaccttctaagtcatcca
ctgagcggttctacggaagaaaaaccaccctcagaggatgactgggtgggaccaagactc
gtcaatcaagaaactcaggtctcggtatccgggaaggcagcccttcttgctctgctcaac
tacttccatttagtccccaacgtcatcaccattctgtcgtacttttacccacaatgcacc
atccaacctgtcagcgtggtagacaattcatctactggttccacacgctccactagcggt
ccatctacggccactacaccagacaatctcacctctggacagatcggtcagcgatcggat
ggttaccaggttatcagtccagtcctcagcgagcaatcctcgacagtacctctgatcgct
gcttcgtttcagaacgaggatggaccgcagcccagcacgttatcttcggagggaacaatc
gtggcaccgaggacagagagggcaccctcttctgtaggatacctgagtgttgttactcct
tgtctggtggcatcagtctgctcgttactgaatcaattgaccgtcctcttaccagacaac
agcatcctctcaaacggaaaatctgaaatcattaagctcattactggtattcttgatcca
aacaaagctcagagtctgtcacttgctactactgcactcccatcatcatcgtcatcatca
tcatcatcatcatcatcgttagccgcaatccagtacctcaggatgtgtagcagggggcta
gacctcgcaatcatctggctggacaaagacacagatgttactaaactacttagcagaact
tttcaacttctacatatcaaatttgaaaaagtcaaagaccaaggtgtcaagacgaacttg
catcgtttaattgagacctgtttcaacttcttgactgtctgtatccagagaggaaaagaa
gaggaggttttggagatctccaggctccatatgactcatatcaccgctacgatggcgtat
cttctgaagttttctgtaccttgttcatctcgactatcatcgtttacatatctggctcat
ctcctcgcagtggataaagcaaatgagccgtccggtcctataacggaggtgctagaagca
aaacaggaagatggtaaaacgcaaggcgctgtcctttgcgatctgctgttgtcatcatac
gatggaacggcaccaccgtgcttggaccacgttcaacatgagaggactgcgttggtggca
gcatttaaaaatctatcagccgttagcaagtccgcaaagcagactgctctcgaagctggc
tttgtggagacactgatcgaagagatgaaaagatgtcacgccaagctggcagccgagaac
cttctgcccgtaaagaagagaaataagaaaaaggaaggtagcctattgaagcagatcaat
acgtgtgtagtgatcttacagaacctgatgtttaataatcaagatatgaaggtggcagtg
aagcaagctggctttgctcaagttctcttcaaactctgggcttggatccagtcaacgaaa
tccttacaggcttcggtcctatcggctctgacggtgtacacctctcattgtatcacagct
tgcatctctttgacccgttcttcgtcgggccagaccaccgggattatcctgaactactta
atcaaatcagcggcccgaaatcctccggatcaaaaagtgtttcgggtgataacgaactgc
ctctggtgtgatgaaagcagaaatatcgtttggaagagtggattcctttcgaatcttggg
aagtttcaatctctgtcgtttaagtcgagtaaatcccagcagttaatccattcagcgatt
ctctggctcaaacttttggcagtattcacgttttcatctgatggtcaacagatggccatg
aaggtcaaagatattctggaactattaattgagttcagcaagtggcctcaaaatgaaatt
agtcacctggcaatcctcgtgatccataatctctgtttccttggagcaaacaagaacaaa
atgctttcaaacgaagctttacttcccgtcctacttgcaaagtttgacaatggggatttg
agggaacaattcctcgtcaccagcgccttatggagtgccgttcacggcaataggaaggtc
aaatccaaattgaaagctcacaatttacaagttcgaagccgcgagaaactggtcaatgta
aagagaaatatacagaaacctatttctgaccaaggagaaagagatttgatggttaaacat
gagagtgtgctgacctgcctgctacgactcttggatgactga
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integrated database retrieval system
