Apostichopus japonicus (Japanese sea cucumber): 139961450
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Entry
139961450 CDS
T10891
Name
(RefSeq) AP-5 complex subunit beta-1-like isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139961450
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
139961450
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
BcsB
Repressor_Mnt
Motif
Other DBs
NCBI-GeneID:
139961450
NCBI-ProteinID:
XP_071816731
LinkDB
All DBs
Position
20:11150714..11202442
Genome browser
AA seq
908 aa
AA seq
DB search
MSLKTTDENHQWRQTAVLMKRDIYGYLQSKGCSEEDCVIDLLQALYGETLSDATKVMVLG
ALQELSESLLMDKTGVEQAVGTLIGFFQEVAMSKGSTFLKSQILVCMTTILLTGDQLRDQ
QSLFLDVTNLLFDIISKVNQGTDRALRETACQCLEEIENNYPGVLMHKLDHFYAMCQLEN
THVRQTYVGLFNRVLRNAVRVKCQQASVSKDDISDLLLTRKEPLKPLMLPDAIPPAMFQL
QSRSPNERISLPSDVDTSELQAAVMKSMDNLLEMSEPDAVKAIQELSCICNICNLPIQIF
QDMQRNLTTSLSLPLFHVHLYLMKHYFSESVEAVNLESVTRHICHPALSLGHRLFCLHFC
MDISHQIRLEDEDSALFKPTIFDSLDETLTKLKFVIKLSPDGLTSNALLSYLEPLMTSVK
NGAIGKGAVACFRGLFHIYANDQSEDLNSAISDFVVEEAVSQHPHFADHALNFISCVSEE
LPDSKFPSHLLQSLTNFIAQVSPKKSLENLEHFLKIFNAAAMEESIQLKPVTKYLQDLFK
STNVLENRNWLLGNQMIQICHNLMLHTSLPNLFTSVGEILFSLMTRHSDTNIRDVARFFY
SMLIHLSEEKIKAILRSLDASNNGQNLTNLVTGTNNFPVAAPVVHLQEPILQLKRLQRSY
KYEQLMDSLHGCSFSEYLRTVSTNASIPEIVIDLQICNGMASESQQLPFSKLYAIVLSVQ
SPTYYNDIEDLHVPYFALNDEEGCRISLVIIPNEPNPANLEASAMFTSSENKTYTCKLKP
LRLEFEDFFLPLPVAADERRQIFNDLWSHLDSEVQRDNSACIQSVTTLPFTASQFHPVIN
EKLSDYIIARPDGDEVDAGWIIGILLPPRWHLLLKMKATDVTVVTINTDNWRLLPLVSHF
LKSFTDGD
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgaagaccactgacgagaatcatcagtggaggcaaactgctgttttgatgaag
agagatatttatgggtatcttcaatctaaaggttgcagtgaagaggactgtgtcatagat
ttgttacaggctctttatggagaaactctgtcagatgctaccaaggtcatggtgctgggt
gctcttcaagaactatcagagtctcttcttatggataaaacaggagtcgagcaagctgtt
gggacattgatcggatttttccaggaggttgcgatgagcaagggatccacctttctcaag
tcacagattctcgtgtgtatgacaacgatacttctgacgggggatcagttgagggatcaa
cagagtcttttcctggatgtcacaaacctgttgtttgatattatctctaaggttaaccaa
ggaactgatcgagccctcagagagactgcctgccagtgcttggaagagattgaaaacaac
tacccaggtgttttgatgcacaagctggaccatttctatgcaatgtgtcagttggagaat
acacacgtcagacaaacctacgtgggcctcttcaacagggttctcagaaatgcggtcaga
gttaaatgtcaacaggcctcagtgtcaaaagatgatatctctgatctcctccttaccagg
aaagagcccttgaagccattaatgttaccagatgcgataccacccgcgatgtttcaactt
cagagtagaagtccgaacgaacgaatctctcttccgtcagatgttgatactagcgaacta
caagcagctgtcatgaagtccatggataaccttctagagatgtccgaaccagatgccgtc
aaagcaattcaagaattgtcatgcatatgcaacatatgtaatttgcctatccagatcttt
caagatatgcaaagaaatctaacaacgagccttagcctaccactctttcatgtacacttg
tatttaatgaaacattacttctcagaatcggttgaagcagtgaatctagaaagtgtcaca
cgacatatttgccaccccgctctcagtctgggacatcgtctcttctgcctccatttctgt
atggacatctcacaccagatccgtcttgaggacgaggattctgcattatttaagccaacc
atctttgacagtctggatgagactttaactaaattaaaatttgtcatcaaactttctccc
gatggactcacgtccaacgcgctactttcatatctggagccactgatgacatcagtgaag
aatggagccatcggtaagggagcagtggcgtgcttccgaggtcttttccacatctatgcg
aacgatcagtcagaagatttgaacagtgccatatccgattttgtagtggaggaggcagta
tcacaacatcctcattttgctgaccacgccctcaatttcatctcctgtgtaagtgaggaa
ctaccagacagtaagtttccatcccatctgcttcaatcgttgaccaacttcatagcccaa
gtgtcccccaagaaatctctggagaatctagaacactttttaaaaatattcaatgctgcc
gctatggaggaatctattcaactcaagcctgtgaccaaatacttacaagatctcttcaag
tctactaacgtgttagaaaatagaaactggttgctaggtaaccagatgatccaaatatgc
cataacctaatgctgcacacatccttgccaaatctgttcacatctgtcggtgaaatcctc
ttttctttgatgacccgtcattcggacacaaacatacgagatgtcgctcgcttcttctac
tcaatgctaattcatctgtctgaagagaagataaaagcaatcttgagatctttggatgcc
agcaacaatggtcagaatttgactaatttagtgactggaaccaacaatttccctgtcgct
gcccccgtggtccacctacaggaacctatccttcaacttaaacgattacagagaagctac
aagtacgaacagctcatggattccttgcatggctgcagcttttctgaatatttgagaaca
gtatcgaccaacgctagcattccagagattgttatcgacttgcagatctgtaatggtatg
gcatcagaaagccagcaacttccattttccaaactctatgcaatagttcttagtgtgcaa
tcaccaacatattataatgacattgaggatctccacgttccatatttcgccttaaacgat
gaagaaggctgtaggatatctctagtgattataccgaatgaaccaaacccagccaatctt
gaggcgagtgcgatgttcacctcctccgagaacaagacctacacatgtaaactgaagccg
ctgcgtcttgagtttgaagacttctttctacccttaccggtagccgcggacgaacgacgg
cagatctttaacgatctgtggtcgcatcttgattctgaagttcaaagagataacagtgct
tgtatccagtcagtcacaactctgccattcaccgcctctcaattccatccggtgataaat
gaaaaattatccgattacatcatagctcgcccagacggagatgaggtagatgctggttgg
atcataggtatcctcttaccaccaagatggcacctgctcttaaagatgaaggcaacagac
gttaccgtagtaacgataaacacagacaattggagactcctgcctcttgtttctcacttc
ttgaagtcgttcacggacggagattaa
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