Apostichopus japonicus (Japanese sea cucumber): 139961473
Help
Entry
139961473 CDS
T10891
Name
(RefSeq) pseudouridylate synthase PUS7L-like
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
Enzymes [BR:
ajj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
139961473
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
139961473
Prokaryotic type
139961473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139961473
NCBI-ProteinID:
XP_071816764
LinkDB
All DBs
Position
20:complement(3763508..3784855)
Genome browser
AA seq
746 aa
AA seq
DB search
MFGMICFRSESPRLKGCIKTRPSDFQVTEINLSGKDAVLSSPDKHVSTSETLHIIPLQQD
RNIVKEDQYTSLDSHQDTRKLVPITKDHKNSSVLLTSVLEDDIYKNIQDYAETQRARINK
SAPPKLDETDRISPLSLGIFHEKKQRTQLYSAVKRQFPHLHAVVDNDHEMKISVDDMYLT
FRSLLSEEDSDNLLRFVSRREVNEKLDLDHMACKSVRTDVHRLIHRHYGSLIESKTFTRD
TDGISKSWIQLRIKEKSRGQKRKSDHTKDKIFYSGFTLWKNNLETLDAIQIIARAIRVQP
SDISYAGIKDKRAITMQFMAVNQPLHRVSNLLNDLAAAQRSVKVGNLHSRTGPITTGELW
GNRFRLIVRNVVLKDVETTTNCCLSCRESNLKEDLVRRIERLKRDGFINYFGKQRFGELC
QTPSGSLTADVGLAMLQKDYKRAVDLILSPDSDKDDLVNKAKRIFKETHDCRAALKVMPH
YKVRECAILRALHRHGIEQEGCCKALLGIPHRMRQLYIHSFTSLLWNHMVTQRILDHGFD
VIPGDLITTEAGKVTKTEVKIASPEDLSDKLTYSIKNVVLPLPGNMVKYPENRTGEAYLQ
LFKTYGLESCQFRLNSLQLNVPGDYRRLIETPLEFQWSLFREDGNVSRCSEFNRGQSETK
DVEDSHEAEINAGRWRRNSEESLTPREAQRPQDDSNEKRPSALKDGSLEICKCGIDISEA
DLNMEISFKLPSSTYATTLLRELIED
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaatgatatgcttcagatctgaatcacccagacttaaaggatgcataaagacc
agaccatctgactttcaggtcactgaaattaatttgtcagggaaggatgcagtgctcagt
tcaccagacaaacatgtttctaccagtgaaacattacacattattccactgcaacaagac
aggaacatcgttaaagaagaccagtacacatcattagattcccaccaagataccaggaag
ttggtacccattacaaaagatcataagaattcatctgtgctattaaccagtgttcttgaa
gatgacatctataaaaacattcaagattatgcagaaacacagagggctaggataaacaaa
agtgctccacctaaactcgatgaaactgacaggatatcaccattgtccctaggcatattt
catgagaaaaaacaaaggacacaattatattctgcagtgaaacgtcagtttccgcacctc
cacgcagtcgtagacaatgaccacgagatgaaaatttctgtcgacgatatgtatttgact
ttcaggtcacttctctctgaagaggactcagacaatttgctcaggtttgtttcgagacga
gaagtgaacgagaagctggatctggatcatatggcctgcaagtctgtcaggactgatgta
cacagacttattcatagacactacggatcactcattgagagtaagacatttacgagagac
acagatgggatttcaaaatcttggatccaacttaggatcaaagaaaagtcaagaggtcaa
aagaggaagtctgatcacaccaaggacaagatattttactctggtttcacactatggaag
aacaatctcgagaccctcgacgccattcagataattgcaagggcaataagggtccaacca
tctgacatcagctatgcaggaatcaaagacaagagagcaataactatgcagtttatggct
gtgaaccaaccattgcacagagtatcaaatttgttgaatgacctcgccgcagcacagaga
agtgtgaaagtcggaaaccttcacagcagaactggcccaatcacgaccggtgaactttgg
gggaatcgatttagactgatcgtccgaaatgtggtcttgaaggacgttgaaactactacc
aattgttgtctttcgtgtagagaatccaatctgaaggaggacttagtgaggaggattgag
agattgaagagagacggtttcatcaattattttggtaaacagagatttggggagctatgt
cagacaccatctggaagtttaacagcagatgtgggacttgccatgctacagaaggattat
aaacgggcggttgatttgattctttctcctgattctgacaaagacgaccttgttaacaag
gccaaacgaatcttcaaggagacacatgactgcagggctgctcttaaagtgatgcctcat
tacaaggtcagagagtgtgcaatactgagggcgctacaccgacatggtatagaacaagaa
ggatgttgtaaagcacttttaggaatacctcatcgtatgaggcagttgtacattcatagc
ttcacaagtttgctatggaatcatatggtgacacaacgaatattggaccacggtttcgac
gtcattccaggggatctgataaccactgaagctggaaaggttacaaaaactgaggttaag
attgcttctcctgaggacttatccgataagttgacttacagtatcaaaaatgtcgtgttg
cctctgcctggcaacatggtgaaatatcctgaaaacagaacaggtgaagcttacctacaa
cttttcaagacatacggccttgaatcttgtcaatttagactgaattctctccagttgaac
gttcctggagattacagacgtctcattgaaactccactggaatttcagtggagcttgttc
cgtgaagatgggaatgtatctcgttgttcggagttcaaccgaggccagagtgaaacaaaa
gatgttgaggattcccatgaagctgaaataaatgcaggtcgatggagaagaaattcagaa
gaatcacttactccaagagaggcccaaagaccccaagatgacagcaatgagaaaaggccg
agcgccttgaaagatggaagtttagaaatctgcaaatgtggcattgatatcagtgaagct
gaccttaatatggaaataagtttcaaactcccatcgtcgacatacgccacaactcttctg
agagaacttatagaggactaa
DBGET
integrated database retrieval system
