KEGG   Apostichopus japonicus (Japanese sea cucumber): 139962021
Entry
139962021         CDS       T10891                                 
Name
(RefSeq) splicing factor 45-like
  KO
K12840  splicing factor 45
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ajj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139962021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ajj03041]
    139962021
Spliceosome [BR:ajj03041]
 Complex A
  U2 snRNP components
   U2 related factors
    139962021
 Complex B
    139962021
SSDB
Motif
Pfam: G-patch RRM_1
Other DBs
NCBI-GeneID: 139962021
NCBI-ProteinID: XP_071817939
LinkDB
Position
20:7159378..7176647
AA seq 473 aa
MSLYDGLGVDTDPKKNVSSPGNKPDVSGWSAGIRMMQSQLRLKKAALTEAQRKIRGATLA
PVVDLKKGKLEDDTRQPSPRNQVSPRRPVHGPPRTVKPSPFVAGVIGDIVGDVSDEYDPA
YPNEYEKMYRRVREKRQKEREIEWEKERERDERKRRERGDRGDRGGRDRDRDRDRERGRD
KERSPQGFSRKPDSDDEGDRDRPRRRGKQGAAIAPPSILLNQDDTPKDSFVAPAPINRNR
PYANIIKKQEQDHPERSTTPPPGSEFSEVEDMPPVQAPSKSSLEQGPGGFSIPVGMGADS
IAAKIMAKYGFKSGKGLGKKEQGISTALVVEKTSRRGGKIIEHGKDVEVDMLPPSVPLPK
QPTPASEFSEVMRNPTKVVLLRNMVGPGEVDEELQPETAEECTKYGAVVKCVIYEEPNAE
EEEAVRIFVEFGSIAAAVKAVVDLNGRFFGGRIVKASFFSPEKFKRFELGRNS
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgtcactatatgatggtttaggagtggacactgatcccaagaaaaatgtttcatcccca
ggcaacaaaccagatgtttctggctggtccgcaggcatacggatgatgcagtcacagctg
cgactcaagaaagctgccttgaccgaagcacagaggaaaataagaggggcaacccttgca
ccggttgttgacttgaagaaagggaagttagaagatgatactaggcagccatcaccaagg
aatcaagtgtccccaaggagacctgttcatggtcctcctagaacagttaaaccatcacca
tttgtagcaggagttatcggggatatagtcggtgacgtgtcagatgagtacgacccagca
tatcccaacgagtatgagaagatgtatcgcagagttcgagagaaacgtcaaaaagagagg
gaaatcgaatgggagaaggagagagaacgtgatgagagaaagcgtcgtgagcgcggtgac
cgtggtgaccgtggcgggagagatcgagatcgtgacagagatagagagagaggaagggat
aaagaacgatccccacagggattctctcgtaagccagacagtgacgatgagggagacagg
gataggccgaggaggagagggaaacaaggtgccgctatcgcccctcccagtatcttgtta
aatcaagacgacacaccaaaagacagcttcgtagcccctgccccaatcaatagaaacaga
ccttacgctaacatcatcaaaaagcaagaacaggaccacccagaacgttccaccacacct
cctccggggagtgagttctcagaggttgaagacatgccgccagtccaggcaccatctaag
agctcacttgaacaagggccaggcggtttctctataccagttggcatgggtgctgattct
attgcggctaagatcatggctaaatacggcttcaaatccggtaagggtctgggcaagaag
gaacaagggatcagtactgcccttgtggtggagaaaactagtagaagagggggcaaaatt
attgaacatggcaaagatgttgaagtagatatgctgccaccttccgttccattacccaaa
cagccaacaccagccagtgaattttcagaggttatgaggaacccaactaaggtggtcctg
ctcaggaacatggtcggcccgggagaagtcgatgaagaactacaaccagagacagcagaa
gagtgcacaaagtatggagctgtggtgaaatgtgtgatatatgaggagccaaatgcagaa
gaagaggaagcagtcaggatatttgttgaatttggaagtattgctgctgctgttaaagct
gttgtggatttgaacggaagattcttcggcggacgaatcgtcaaggcatcttttttcagc
ccggagaaatttaaacggttcgagctgggaaggaattcgtga

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