Apostichopus japonicus (Japanese sea cucumber): 139962110
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Entry
139962110 CDS
T10891
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139962110
Enzymes [BR:
ajj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
139962110
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
139962110
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
139962110
NCBI-ProteinID:
XP_071818108
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Position
20:complement(7010082..7027764)
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AA seq
579 aa
AA seq
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MRILTWNINGIRACKQSLKQELCDLSGDIVCLQETKITRDLLDEETAIQDGYSSYFSFSK
KKSGYSGVATYCKAHATPVSAEEGLSGILTDKLKGTSDVIGHYGDLSEFTNEELISLDSE
GRAILTEHQYRDTYGNIRQLVVINVYCPRADPDREGRLNYKLQFYKLLQIRAEALLKAKK
TVIILGDFNVSHKPIDHCNPDADDEKFYARPSRHWLGQLLMDTSSTCKSATKQNSQKKPS
KFIDTFRYFHPKQEHAFTCWSTVTGARQTNYGTRIDYIVSDVSLCQEEFEDCEIVQDFEG
SDHCPVRATLKGTPEPFDKLPSMCTKFMPEFYGRQQKLSTFFTKGLEKEKSAKTERTQAI
GSASLGKEKLPSSWKRNLGKSDYEPSFKRTKSDSKNKSHKTVSITNFFKKVPSATQGSSS
KETQNLNYMQLQNDTDQIDDITKTIHIGKVPRGDEDKGIDGGKNEGSLGMTGETNSSETN
GLVKGTNVRSKTKKQMVSSWKDILKGPRPPPLCKGHKEPCLLRTVKKPGPNLGKQFYVCC
RPEGHKSNPEARCNNFEWVVPLKKLKEVKGDEPERETKI
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaggattctcacttggaacattaatggaatcagggcctgtaagcagtcactgaagcag
gagctctgtgacttatctggggatattgtttgccttcaagaaaccaaaatcacacgtgac
cttcttgatgaagaaacggccatacaagatggatacagctcatattttagtttttcaaag
aaaaagagtggttactcaggggttgcaacttactgtaaagcacatgcaacgccagtatct
gctgaggaaggactgtctggcatcttgacagataagctgaaaggaacatctgatgtgatt
gggcattatggagatctgtcagaattcactaatgaagagttgataagtctggactcagag
ggcagagcaattcttacagaacaccaatacagagatacttatggaaacatcaggcagttg
gttgttatcaatgtctactgtcctcgtgctgatcctgacagagaaggccgtcttaactat
aagctgcaattctacaaacttcttcaaatcagagctgaggccttgctcaaagccaagaaa
actgtaatcattctcggggacttcaacgtatctcacaaacctatcgaccactgtaatcct
gatgcagatgatgagaagttctatgccaggcctagtcgccattggttgggacagttactg
atggacacctcttccacctgcaaaagtgccacaaagcagaactcacagaaaaagcccagc
aaatttatagacacttttagatatttccatccgaaacaagaacatgcctttacgtgttgg
tcgactgtcactggtgcccgacaaacaaactacggcaccagaatagattacattgtctca
gatgttagtctttgccaggaggaatttgaggattgtgaaattgtccaagatttcgaaggt
tctgatcattgtcctgtcagagcaaccttgaagggaactccagaaccttttgacaaactg
ccgagcatgtgtacaaagttcatgccagaattctatggaaggcaacaaaaattatcaaca
tttttcaccaagggcctggagaaggaaaagtcggctaagactgaaagaacccaagccatt
ggaagtgcctccttgggaaaggagaagttaccgtcctcttggaaaagaaatttgggtaag
tcagattatgaaccctctttcaaaaggacgaaaagtgactcgaaaaataagagtcacaaa
actgttagtattactaatttcttcaagaaggttccatcggcaactcagggttcgtccagc
aaagaaacgcaaaatttaaattatatgcaacttcagaatgatactgatcaaattgatgat
atcactaaaacaatccacattggcaaagttcccagaggtgatgaagacaagggcattgat
ggaggaaaaaatgaaggttccttaggaatgacaggagagaccaattcgagtgaaaccaac
ggactagtgaaagggaccaacgtaaggagtaagacgaagaagcaaatggtttcatcctgg
aaggacattttgaaaggaccccgtccacccccactatgcaaaggccacaaagaaccttgc
ctgctaaggacggtaaaaaagccaggaccaaatctcgggaagcagttctacgtttgttgc
agaccagagggacataagagcaaccctgaagcaagatgcaataatttcgaatgggtggtc
cctttgaagaagttaaaagaggtcaaaggtgatgagcctgaaagagagactaaaatctag
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