Apostichopus japonicus (Japanese sea cucumber): 139962513
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Entry
139962513 CDS
T10891
Name
(RefSeq) DNA mismatch repair protein Mlh1-like isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03430
Mismatch repair
ajj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
139962513
03460 Fanconi anemia pathway
139962513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139962513
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
139962513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Paramyxo_C
Motif
Other DBs
NCBI-GeneID:
139962513
NCBI-ProteinID:
XP_071818638
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Position
21:12676517..12697646
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AA seq
744 aa
AA seq
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MLDFLSVTMAGVIRRLEETVVNRIAAGEVIQRPANALKELIENCLDAKSTSIQVTVKAGG
LKLLQIQDNGTGIRKDDMDIVCERFTTSKLKDFNDLRSIATYGFRGEALASISHVAHLSI
TTKTADSKCAFKGSFTDGKLKGPVKPCAGNQGTQITVEDLFYNVATRRKALKSPSEEHGK
IYEVVSRYAIHNSGKAFTLKKQGQSSCDLRTTPAASVVDNIRTVFGPTVARELLEVDHKN
DKLNFQVKGYISHANYSVKKCVLLLFINHRLVDSSSLRKAIEAVYSTYLPKGMHPFLYLS
LEISPQNVDVNVHPTKHEVHFLHEDDIIEDIQKMIEQKLLGCNSSRTYFAQALLPGAPVA
VSEVASKDVKDGKEQQQTDTQTKVRRDDQMIRTDAREQKLDAFIVKCPASSSQDEDAGSD
EPVKPVDGEELPTPMDVDTPSTSKSRRKRTIDQVSSTAPEVGSSTSGAEVKEGGKQADKV
RYHREIKLTSILNLQQSVEVDTHKGLREIFKNHTFVGCVNAEYALLQHQTKLYLINTSKL
SKEFFYQLVLFDFGNFGVMKLSNPGSIFDLAMIALDSKESGWSDSDGPKDQLAQYVMDLL
KSKSEMMMDYFSLEIDEAGNLCTLPLLLDNYIPPFEALPMFVLRLATEVDWESEDECFRS
FARECSLFYGVHRKLRLTDEKTDGAKSQDAKEEDFPTYNWRWTIEHVLYPALKNQFLPPK
EFAENASILQIANLHDLYKVFERC
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgttggacttcttgtccgtcactatggccggtgtcattaggagattagaagagacggtg
gtgaatcgtattgcagctggagaagtcatacagagaccggctaatgccttgaaggaattg
atagagaactgtttggatgcaaaaagtacaagcatccaagtaacagtgaaggcaggtggc
ctgaagctacttcaaatccaggataatggaactggtataaggaaagatgacatggatatt
gtgtgtgaaaggtttaccactagtaagctgaaagacttcaacgacttaaggagtattgca
acttatggattccgaggagaggctttagccagcatcagtcatgtggctcacctctctatc
acaactaaaacagctgactctaaatgtgctttcaagggcagctttactgatggaaaactt
aaaggtcctgtcaaaccatgtgctggtaaccaagggactcagattacggtggaagactta
ttctacaatgtcgcaactcgaaggaaggcattaaagagtccatccgaggaacacggcaag
atatatgaagtcgtcagccgctatgcaattcacaactctggaaaagccttcacccttaaa
aagcaagggcagagcagctgtgacctaaggaccactccggcagcatctgttgtggataat
atcaggacagtctttggtccaactgtggctagggaactactagaggtagaccacaaaaat
gataaactgaacttccaggtcaaaggttacatatcccacgccaactactccgtgaagaag
tgcgtcctcttactatttattaatcacagattggttgattcttccagccttcgtaaagcc
atagaagcagtttactccacgtatctccccaaaggcatgcatccctttctttatctgagt
ctggagatatcaccccagaacgtagacgtcaacgttcatccgacaaagcacgaggtccac
ttcctgcatgaggatgatatcatcgaagatattcagaaaatgatcgagcagaagcttctc
ggttgtaattcgtctcggacatactttgcacaggcccttctaccaggagctcctgtcgct
gtttcagaagttgcatcgaaagatgtcaaagatggcaaagagcagcagcagacggatact
caaacgaaagtaaggcgcgacgaccagatgatacggacagacgccagggagcagaaactc
gacgcattcatcgtgaaatgtcctgcctcttcctcccaggatgaagatgcaggatccgac
gaaccagtaaaaccagtcgacggagaggagcttcctacgccgatggatgtagacacccct
tcaacttctaaaagtcgccggaagagaacgattgaccaagtttcatccactgcacctgaa
gttggttcttccaccagtggagctgaggtcaaggaaggtgggaaacaggcggacaaagtc
cgctaccatcgggaaatcaaactcaccagtattctgaatttgcaacagtcagtagaggtc
gacacccacaaaggattgcgggagatatttaaaaaccacacctttgtcggctgcgttaat
gctgaatatgcattattgcagcaccaaactaaactgtacctcatcaacacaagtaaattg
agtaaggagttcttctaccaacttgtcttatttgattttggaaactttggagtgatgaaa
ctttctaatcctgggtcaatattcgacctggcaatgattgctctggactccaaagagagc
ggttggtccgactcggacgggccaaaagaccaattggctcaatatgtcatggacttactc
aagtcaaagtcagaaatgatgatggattacttctcattggagattgatgaggctggaaat
ctatgcacgctacctctattattggataactacattccaccttttgaagctctgcctatg
tttgtgctgaggctggccactgaggttgactgggagtcggaagatgagtgctttcggtca
tttgcaagagaatgcagtctcttctacggtgtccaccgcaagttgagactgacggacgag
aaaacagatggtgctaagagtcaagatgctaaggaagaggactttcctacttataattgg
agatggacaatagagcatgttttatacccagccctgaaaaaccaattcttaccaccgaag
gagtttgcagaaaatgccagtattttacaaatcgcaaacctacacgacttgtacaaagta
tttgagcgatgctaa
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