Apostichopus japonicus (Japanese sea cucumber): 139962595
Help
Entry
139962595 CDS
T10891
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3-like
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00230
Purine metabolism
ajj00670
One carbon pool by folate
ajj01100
Metabolic pathways
Module
ajj_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
139962595
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
139962595
Enzymes [BR:
ajj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
139962595
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
139962595
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
139962595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp_3
ATP-grasp
03009_C
ATP-grasp_4
CPSase_L_D2
ATP-grasp_2
Dala_Dala_lig_C
vWA_LIC10012
Motif
Other DBs
NCBI-GeneID:
139962595
NCBI-ProteinID:
XP_071818821
LinkDB
All DBs
Position
21:complement(6636552..6682805)
Genome browser
AA seq
1005 aa
AA seq
DB search
MTDKVLVLGGGGREHAIAWKLAQSCLVGEVMVTPGNAGTASINKVRNVDAPDGDFQQLAS
WCHTNQINLVVVGPESPLAAGVVDVLNAAGVPCFGPTKAAAELEASKAFSKAFMDKYEIP
TAKWKTFADVKAACKHINSAPYKALVVKASGLAAGKGVVVAKTKEEACSAVQDILQDKKF
GSAGETVVIEEVLEGEEVSVLAFSDGTTVACLLPAQDHKRVFDGDEGPNTGGMGAYCPYP
KMNQTTLEMIKTDVIQKAVDGMQQEGRKYVGILYAGLMITVEGPKTLEFNCRFGDPETQA
LLPLLKSDLYRTMKACVDGQLHLEVPIFEENKSAVGVIIASGGYPGSYKKGFHIKGIPQV
EKEGILVFHSGTSLKDNKVLTSGGRVLAVVSTEHDLESAAAKALYAAQKIQFDGAFHRKD
IAKRGCDFLKEQRSINRLTYAGSGVNINDGNKLVKAIKPLASATTRRGCKSVIGGFGGLF
DMDAAGYKDPLLVSGTDGVGTKLKIAQSYGNHSTVGQDLVAMCVNDILAHGAEALFFLDY
FACGKLEVAVATDVIAGIAEGCKLAGCALLGGETAEMPGMYDSGEYDLAGFAVGAVEREA
LLPRTCDIQEGDVVLGVGSSGIHSNGFSLVRKIIDKEGLSLNDLCPFQEDKQLGEVLLTP
TRIYSKSLLPSIRSGKVKAFSHITGGGLSENIPRVLPENVKVELDASQWTVPAVFGWLSQ
SGNIEEQEMSRTFNCGIGAVLIVKAENANEIQSLIEVNSETVWRIGSVKSCSKNDQQVVI
TGLSQALQRSYLGQILSQERRKLKVAVLISGTGTNLQALIDFTRNSMNRCDAEICLVMSN
KPEVEGLAKAKRAGIPTKIISHKDFKSRVEFDMKLHQTLSDVGVDLICLAGFMRILSGEF
VRKWRGALLNIHPSLLPSFPGMHAQKQAIEAGVRLSGCSVHFVVEEVDAGAIIVQKAVPV
LPEDSEESLTTRIRQMEWIAYPEALQLVASGKVRYGNDGKVEWQS
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaagtgctagttctaggtggaggtggaagagaacatgccattgcttggaag
cttgcccagtcttgtttggttggtgaggtcatggtaactccaggaaatgctggtacagct
tcaattaataaagtcagaaatgttgatgcacctgatggtgatttccagcagcttgcttct
tggtgtcacaccaatcaaattaatctagttgtggtgggtcctgaatctccattagctgct
ggtgtggtggatgtgctcaatgctgcaggtgtaccttgctttggacccacaaaggcagca
gcagaactggaagccagcaaagccttctctaaagcctttatggacaaatatgagatacca
acagcaaaatggaaaacgtttgctgatgtaaaagcagcatgtaagcacatcaatagtgct
ccttacaaggctcttgtggtcaaagctagtggactggcagctggtaaaggtgtcgttgtg
gcaaagaccaaagaagaagcctgctctgctgtccaagatattcttcaggacaagaagttt
ggcagtgctggtgaaacagtagttattgaagaagttttggaaggagaggaagtttcggtg
ttggccttttctgatgggacaactgtggcatgcctgttacctgctcaggaccataagcga
gtgtttgatggggatgaaggacccaatacaggtggcatgggggcatactgtccctatcca
aagatgaaccagacaactttggaaatgataaaaactgatgttattcagaaagctgtggat
ggtatgcaacaggaaggaagaaaatatgttggtattctgtatgcaggactgatgattact
gttgaaggccccaagacattggaattcaactgtaggtttggagaccctgaaacacaggct
ttacttccactcttaaaaagtgacttatatcgaacaatgaaggcatgtgtggatggacaa
ctgcatttagaagtaccaatatttgaagaaaacaagagtgctgttggggttatcattgca
agtggaggatatccaggatcttacaagaaagggtttcacatcaaagggatacctcaagtg
gaaaaggaagggattctggtattccatagtggtacctctctaaaagataacaaggtattg
acttcaggaggtagagtgctcgcagtggtgtccaccgaacatgatcttgaatctgcagct
gccaaggcattgtatgctgctcagaaaattcaatttgacggtgcttttcatcgaaaagat
attgcaaaacgaggatgtgactttttaaaggaacaaaggtcaataaacagattaacctat
gcagggagtggtgtgaacattaatgatggcaacaagctggtgaaggccataaagccattg
gcatcagctaccactaggcgaggatgcaagtctgtaattggtggctttggtgggctcttt
gacatggatgcagctgggtacaaagaccctctcctagtctcagggacagatggtgttgga
acaaagttaaagatagctcagtcctacggtaaccattctacagttggccaagatctggtt
gccatgtgtgttaatgatattttggcccatggtgcagaggccttgttctttctggactat
tttgcctgcggtaaactggaagtggcagtagctaccgatgtgattgctggtatagctgag
ggatgtaaactagcagggtgtgccttgttaggtggagaaacagctgagatgcctgggatg
tatgatagtggagagtatgacctagcaggctttgctgttggtgctgttgaaagagaagct
ctcctaccacgtacttgtgacatacaagaaggagatgttgtactaggtgttggttcatct
ggtattcatagcaatggattcagccttgtacgtaagatcattgataaagaaggactttca
ttaaatgatctatgtccattccaagaagataaacaacttggagaggttttacttacccct
acaaggatttactccaagtcattactacccagtatcagaagtggaaaggtgaaagccttt
tctcacatcactgggggtggtctttctgaaaacattccacgtgtcttgccagaaaatgtg
aaagtagagcttgatgctagccagtggactgttccagctgtgtttggatggctctcacaa
tcaggaaatatagaagaacaggaaatgtctagaacattcaattgtggcatcggcgctgtt
ttgattgtgaaagctgagaatgcaaatgaaatccagtcactgattgaagtgaattctgag
actgtttggagaattggttctgttaaatcttgttcgaagaatgatcagcaagttgttatc
actggcttatcccaggccttgcaaagaagttacctggggcaaatattgtcacaagaaaga
agaaagcttaaagtagcagttctcatatcaggcacaggtacaaatcttcaagcactgatt
gattttacaaggaattccatgaatagatgtgatgcagaaatatgtcttgtgatgtcaaat
aagccagaagttgaaggattggcaaaagccaagagagctggcataccaacaaagattatc
agtcataaagatttcaaatcaagagttgaatttgacatgaagctacaccagacgctcagt
gatgttggtgttgatttaatatgcctagctggattcatgaggatcctgagtggagaattt
gttcgaaagtggcgtggggcccttttgaatattcatccatctctcttgccatcattccct
ggaatgcatgctcagaagcaagcaattgaagctggtgttcgattgagtggttgttccgtt
cattttgtagtggaggaagtggatgctggagccatcattgttcaaaaggctgtccctgtt
ctccctgaagattctgaggagtctcttacaacaagaatacgacagatggagtggatagct
tatccagaagctctacaattggtggcctctggaaaagtgaggtatggaaacgatgggaaa
gtggaatggcagagctag
DBGET
integrated database retrieval system
