Apostichopus japonicus (Japanese sea cucumber): 139962663
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Entry
139962663 CDS
T10891
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ajj03036
]
139962663
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139962663
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
CUE
ERCC3_RAD25_C
HHH_3
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
139962663
NCBI-ProteinID:
XP_071818932
LinkDB
All DBs
Position
21:9364925..9390711
Genome browser
AA seq
1152 aa
AA seq
DB search
MASLLEKFKFTQKPKSTMTNGKSSCESSASTSQDSEVTCIPETPSSESRKRLEASPVFHV
AQTQKQTKADSSENSPTFLTDANLRSEKNVRRDILSNGSHGLTKKLQDLPEDDVKDSDET
YFSESIHSNRTVDSAKVRDDQECHTVDDEIEDDMSPVFQNENGTGMPESGSQTRLHSPSR
DSENGASGDDSSDSEIESSAVRRRKKRALSPWNGRQDDDENGTGEEDSEDEDEDDSDDEI
DVAVKEKPSKRRRVDIRKSSSIDETFEEAGNSQMKQLTEMFPHHSQKDLEKAISQCEGSL
DIAVSLLINASSTQENSRNRGNQSTGKRTNENGVGEKKKKPLKGRHRSTSSEDEEDNKSG
DNRGSGSDSDLPEPFAPASPSKSPDTTKTKPFSLSKFAYNSGWVSKEKQQKPVERKGESK
MKPIERKVDSKTKPKKVVQKKKKRPTGRRRKDQSSEEDEEDCSFVVREGSDSDGGHIGTI
DQSEEEEEEAEAISSDDDDEEEYYGGGNEFSESFQTEVVQFFNTASKEELGALNGCSGTK
ANKIIHLRPFDNFSEVVEKLEATNSLSVHLIENCEDLFGERQLLLDVLNECCTTSQKIQN
TLVEEEVANDKKISLLDQSLSLKPYQLIGVNWMKLLHRHKINGILADEMGLGKTIQVIAF
LASLMEEGNTGPHLIVAPASTLENWLREFNKWCPSMEAILYTGDRDYRMQLAEDILYGSL
DCNVLITSYSMATSDVDYKRLFKRLKLQYSVYDEGHMLKNVKSLRYKSLMKIKSRQKLLL
TGTPLQNNLLELMSLICFVVPTLDSPEKTLTLQRLFSNISSADESSFVQDRIQQAKQIME
PFVLRRVKDEVLAELPKKIIQVEVCPMVPTQQIFYQELKASLHRNKDLKGSSLAKNTMSA
LMELRKLANHPLLMRRLYTNEKLKEMSKLMLREPTHYEADPILIEEDMGVMSDYELHHLC
TLYPSVSHFRLEESAIMESGKFKALGRILPELKEQGLKVLLFSQFVMMLDIMEPYMKQCK
HNYLRMDGSTSVGERGEIMDKFINDPDIFVFLLSTKACGLGINLTIANTVILYDIDYNPH
NDKQAEDRCHRVGQTKEVTVIKLVSKGTVDESMLQRAQQKLHLEKQMTSDDHDGEAEKLN
IADLLKEALEVS
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggcatccctgctagaaaagttcaaattcacccagaagccaaaatcgacaatgaccaac
ggtaaatcttcttgtgaatcctcagcaagtacttctcaagattcagaagtgacttgtatc
ccagagactccgtcctcagagagcaggaagagacttgaagcaagtccagtttttcatgta
gcgcaaacccaaaagcaaactaaagctgacagctctgaaaacagcccgacatttctgaca
gatgccaacttgagatcggaaaaaaacgtacggcgggacatccttagtaacggttcccat
ggtttgactaagaaattgcaagatcttccagaagacgatgtgaaagattctgatgaaacc
tacttcagcgagagtatccatagcaaccggacagttgactcggccaaggtcagagacgat
caagaatgccacacagtcgatgatgaaatcgaggatgatatgtcaccggtattccagaat
gaaaatggaacaggcatgcctgaatcaggaagtcaaactcgccttcattccccgtcgaga
gactcggagaacggagccagcggggatgattcatccgatagcgaaatagagtcatcggcc
gtaaggagaagaaaaaagagagctctaagtccttggaacggaaggcaggatgatgacgag
aatggcaccggagaggaagattcggaagatgaagatgaagatgactctgatgatgaaatc
gatgtagcggttaaagagaaaccttccaagagaagaagagtagacataaggaagagcagc
agcatcgatgaaacattcgaagaggcgggaaacagtcagatgaaacaactgacagaaatg
tttcctcaccattcacagaaggatttagagaaagccataagtcaatgtgaggggtcgttg
gacatagcagttagcttgttgatcaatgcatcatcgacacaagaaaactcaagaaaccgt
ggtaaccagtcaacaggaaaaagaacaaatgaaaatggagttggagagaagaagaaaaag
ccacttaaaggaagacacagaagtacatcatcagaggatgaggaagacaacaaatctgga
gataatcgtggaagtggctctgatagcgacctgcctgaaccgtttgccccagcaagtccc
tcaaaatctccagacaccactaaaactaaaccattcagtctatcaaagtttgcctataat
agtggctgggtatcgaaggagaagcaacagaaaccggttgagaggaagggagagagtaag
atgaaaccaattgagaggaaggtagatagtaagacgaaaccaaagaaagttgttcaaaag
aagaagaagagaccaacagggagaaggaggaaagatcagtcatctgaagaagatgaggag
gattgtagctttgtcgtccgagaaggctcagattctgatggtggtcacataggtacaatt
gaccaatcagaagaggaggaggaagaagctgaagcgatatccagtgatgacgatgacgaa
gaagaatattacggtgggggtaatgagttttcagaatctttccaaaccgaagtggtacaa
tttttcaatacggcttcgaaagaggaactaggagcactaaacggttgttccggaacgaaa
gctaataaaatcatccatctccggccttttgataactttagtgaagtggttgagaaattg
gaggcgactaacagccttagtgtccatctgatagaaaattgtgaagatctgtttggtgag
aggcagcttcttctggatgtgctgaatgagtgctgtacaacttcacagaaaatacagaac
actctagtggaagaggaggtggctaacgacaagaaaatatcccttcttgatcagagtctt
tcactgaaaccttatcagctgattggagtgaattggatgaagctacttcatcgacacaag
ataaatgggatactggccgatgaaatgggtctgggtaaaaccattcaggttattgcattt
ctagcttctcttatggaggaaggaaacaccggtcctcatcttatagttgcacccgcatcg
actttagaaaactggctacgagagttcaacaagtggtgcccgtcaatggaggctatcttg
tatacgggtgatagagactacagaatgcaactggctgaagatatactctacggatcttta
gattgtaatgttttaattacctcatatagcatggctaccagcgatgtagactacaagaga
ctcttcaagaggctaaagctacagtactctgtatatgatgaaggtcatatgctcaaaaac
gtcaagagtcttaggtataaatcgctgatgaaaatcaagagtcgtcagaaattgctccta
acaggaacccctctccagaacaatctcctcgagctgatgtcgttgatctgtttcgtggta
ccaaccctagatagtcccgagaagactttgacacttcaaaggttattctcaaatatctcg
agtgcggatgaaagttccttcgttcaagatcggatccaacaggccaaacagatcatggag
ccatttgttctacgcagggtcaaagacgaagtcttggccgaattgcccaagaagataatc
caggtggaggtttgtccgatggtgccaactcaacaaatattctaccaggaattaaaggca
tccttacatagaaacaaggatctgaaaggctcgtcattggctaaaaacaccatgtcggct
ttaatggaactcaggaagctagctaaccatcccttattgatgcgaagactatatacgaac
gaaaaactcaaagaaatgtccaaactgatgctgagggaaccaacgcattatgaagcagat
ccgatactgatagaagaagacatgggcgtgatgtctgactatgagctacatcatctctgc
acactgtacccctcagtctctcacttcaggctggaggagtcagcgatcatggaatcggga
aaattcaaagccttgggtagaattctaccagagttaaaagaacagggtttgaaggtttta
ctattcagtcagtttgtcatgatgttggatatcatggagccttacatgaagcagtgtaaa
cacaactacctcagaatggacgggtctacttcagttggggagagaggcgagatcatggat
aagtttatcaatgacccagacatatttgtattcctactttccaccaaggcgtgtggcctt
ggaattaacctcaccattgccaacacggtgattctgtatgacattgattacaacccacac
aatgacaagcaggctgaagatcgttgccacagagtggggcagacgaaggaggtgacagtt
atcaaacttgttagcaaaggcacagtggatgaatccatgttgcagcgagcgcaacaaaag
ctgcatctcgaaaagcagatgacctctgacgatcatgatggtgaagcagagaaacttaac
atagcagatctattgaaggaagcactggaggtcagttaa
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