KEGG   Apostichopus japonicus (Japanese sea cucumber): 139962666
Entry
139962666         CDS       T10891                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ajj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    139962666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ajj03021]
    139962666
   03036 Chromosome and associated proteins [BR:ajj03036]
    139962666
Transcription machinery [BR:ajj03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     139962666
   Coactivators
    SAGA/TFTC/STAGA complex
     139962666
Chromosome and associated proteins [BR:ajj03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     139962666
    STAGA complex
     139962666
    TFTC complex
     139962666
    SAGA complex
     139962666
    SLIK complex
     139962666
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone Wbp11 TFIID-31kDa MerR-DNA-bind Spidroin_N CENP-T_C DUF5827 TAF10
Other DBs
NCBI-GeneID: 139962666
NCBI-ProteinID: XP_071818937
LinkDB
Position
21:complement(18665382..18674870)
AA seq 236 aa
MNESPTVQSTNTALLPSPAPPSSSSSTSSQAPRKTLQETIHDIEAQISRLEQLEKAGSLN
VRQEQDLKKLRDLMSKALTEQARVKSEKLRQQEIQLALAKSQSQSLALGKSGRPGNTMSD
SASRHSSDNSQVLNKKKIQDLVREIDPNTQLDEDVEEMLLQIADDFIENIVTAGCQLAKH
RKSSTLEVRDVLLHLERNWNMWIPGYTSEENRQVKRPAATEAHKQRMTLIRKTLKK
NT seq 711 nt   +upstreamnt  +downstreamnt
atgaatgagtcgccaacagtgcagtcaaccaataccgcattgttaccgtcacccgcaccg
ccctcctcctcctcctccacctcctcgcaggctccaagaaagaccctgcaggagactatt
catgatattgaggcgcagataagtagattggaacaacttgagaaagccggatctttgaat
gtcagacaggagcaagacttgaagaaactccgggatttaatgagcaaagctctcacggaa
caagcaagggtcaagagtgaaaagttaagacaacaagagattcaactagcactggccaaa
agtcagagccagtcgctggctttgggaaagagtggcaggccgggaaacaccatgagtgac
tcagcgtccagacacagctcagacaattcacaggttttaaataagaagaagattcaggac
ttggtgagggagattgatcctaacacccagctggatgaagatgtggaagagatgctgtta
caaatcgctgacgatttcattgagaatatagtcactgctgggtgccagctggccaaacac
aggaagtccagtacgttggaggtccgagatgtcctgcttcacttagagagaaattggaac
atgtggatccctggttacacgtcggaagaaaacaggcaagttaaaagaccagcagcaacg
gaggctcataaacagagaatgacgctcatcaggaaaacgctgaaaaaatga

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