Apostichopus japonicus (Japanese sea cucumber): 139962920
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Entry
139962920 CDS
T10891
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ajj01009
]
139962920
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajj03021
]
139962920
03041 Spliceosome [BR:
ajj03041
]
139962920
Protein phosphatases and associated proteins [BR:
ajj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139962920
Transcription machinery [BR:
ajj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
139962920
Spliceosome [BR:
ajj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139962920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
139962920
NCBI-ProteinID:
XP_071819427
LinkDB
All DBs
Position
21:complement(18686719..18718700)
Genome browser
AA seq
713 aa
AA seq
DB search
MSQRRDFRGRPDNRFRYNGPPGRGGRGGFNRPPGAGGFPGRRRENNMQQHGRQHQPPQNK
PNVNEQKVTTPTSVGNKNASPVIKQPGNVQPLMQKDIPKPLPGDKQEKVGESPKGNQVNA
TPPRPNSNTGTPMSAPKTVPSSPAKTPTSASGGGTVRPGVNTGPASKPPGNQRSDSGFHG
NSNNRRGSNQGPFPNQGQGGRNQGPNQGSPHQQGGRFGRGNQDRRPQQSRFSGPTGPGPF
QGEPQSQQPTDFGDDLMTEKKTEKKFTGRCRLFIGNLPNETTDDEFKKLFAKFGEINEVF
LNKQKMFGFIRLDTRLNAEAAKNEMDGATFKGRVIRVRFAAHGAALRVKNLSTAVSNELL
EEAFALFGEVERAIVVVDDRGKSTGEGIIEFARKPAALAAIKKIKEGVFLLTSSTRPITV
EPLEQKNDEDGLPEKNVPKNPSFYQEREVPPRFAQRNSFEFEWGQRWKQQSVEEDNKRAQ
LEKEIIADREKLMEEVELARHDYHTMQMRQELLHRQKELERLEEQRKDLEARRQGLQRQR
EDRFVPPGGVIMGDDQMMRQHQGDGGMPIRNEGMDMGQGMRPDDMNRRDGDRFMTGGGNG
GLPPPPPPPPLLMDGGVQTPDMQTQRPSRFDTPGSGGGGFNGNPRGNLPPGGGMSGAAPG
QPVGVIGGNFGGPNMPPGNMGGGGGNPRPLMDDLHEHGGGEFGGGAPKRPRRF
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagagacgggactttagaggaagaccagataacagatttaggtataatggtcca
ccaggacgtggaggaagaggtggatttaatcgccctcctggtgcaggaggatttccagga
cgaagacgtgagaacaatatgcaacaacacggtaggcaacaccaaccgcctcaaaataag
cctaatgttaatgaacagaaagtgacgacgccaactagtgtagggaacaagaatgcgagt
ccagtcattaagcaaccaggaaatgtccagccattgatgcagaaagatattccaaagcca
ctcccgggagataaacaagagaaagttggggaatcaccaaaaggtaatcaagttaatgct
acaccaccaaggcctaatagtaatactggtactccaatgagtgcaccaaagactgttcct
agctcaccagccaaaacaccaacatcggcaagtggtgggggtactgtgagaccgggtgta
aatactggccctgctagcaagccaccaggaaaccaacgttcagatagtggtttccatggg
aattcaaacaatagacgtggatccaatcaaggtccgtttccaaatcaaggccaaggaggt
agaaatcagggaccaaaccaaggatcaccccaccaacaaggaggacgttttggaagggga
aatcaagacagaaggccacagcagtctagatttagtggtccaactggacctggtccattt
caaggagaaccacaaagtcaacagcctactgatttcggtgatgatttgatgacagaaaag
aagacggaaaagaaatttacaggaaggtgcaggttattcattggtaatcttccaaatgaa
acgacagacgatgaatttaagaagttgtttgcaaagtttggagaaatcaacgaagtgttc
ttgaacaagcagaagatgtttggattcataaggctggatacacggttgaatgcagaggcg
gccaagaacgagatggatggcgctacattcaaagggagggttatcagggtgcgatttgca
gctcacggtgcagctctgcgagtcaagaatctatcaacggctgtatcaaacgaacttctt
gaagaggcctttgcattgtttggcgaagttgaaagggcgatcgtcgtcgttgatgataga
ggaaagtccaccggagagggaattattgaatttgctagaaaaccagctgcattagctgct
atcaaaaagattaaagaaggagtctttttattaacgtcctctaccaggccgataactgtc
gaacctctggaacaaaagaacgatgaagatggccttccagagaagaacgttcccaaaaat
ccctcattctaccaggagagagaggtgccaccaagatttgcccagaggaattcttttgaa
tttgaatgggggcaaagatggaaacagcagtcagtggaggaggacaacaaaagggctcaa
cttgaaaaggaaattattgcagatagagagaagttgatggaagaagtggaactggctagg
catgattaccacaccatgcaaatgagacaagagctactgcatcgtcagaaggagttggaa
cgccttgaagaacaaaggaaagatttagaagcaagacgtcagggcttacagagacagaga
gaagacaggtttgtcccgcctggtggcgtgatcatgggtgacgaccaaatgatgagacag
caccagggtgatggtggaatgcctattaggaatgaaggaatggatatgggacaaggcatg
aggccagatgacatgaacaggagggatggcgatagatttatgaccggtgggggtaacggg
ggactgccaccacctccaccccctccacctcttctcatggatggaggagtacagacccct
gatatgcagactcagcgaccgtcacggtttgacacccctggatccggagggggcggcttc
aatggaaatccccgaggtaatctcccccctggaggaggtatgagtggggcagcaccagga
caaccagttggtgtgataggaggtaattttggcggtccaaacatgccaccaggaaatatg
ggaggaggcggaggcaacccgagaccgctgatggacgacttgcatgagcacggcggtggt
gaattcggaggaggtgccccgaaacgtcctcgccgtttctga
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