KEGG   Apostichopus japonicus (Japanese sea cucumber): 139962956
Entry
139962956         CDS       T10891                                 
Name
(RefSeq) histone-binding protein RBBP4-like
  KO
K10752  histone-binding protein RBBP4
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03082  ATP-dependent chromatin remodeling
ajj03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ajj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    139962956
   03083 Polycomb repressive complex
    139962956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ajj03036]
    139962956
Chromosome and associated proteins [BR:ajj03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     139962956
  Histone modification proteins
   HAT complexes
    HATB complex
     139962956
   HDAC complexes
    Sin3A-HDAC complex
     139962956
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     139962956
    PRC2.2
     139962956
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     139962956
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    139962956
  Chromatin remodeling factors
   NuRD complex
    139962956
   NuRF complex
    139962956
   NuRF complex (fruit fly)
    139962956
SSDB
Motif
Pfam: CAF1C_H4-bd WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR75_1st Beta-prop_EML_2 EIF3I WD40_WDHD1_1st WD_LRWD1 Beta-prop_EML WD40_RFWD3 Beta-prop_IFT140_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 139962956
NCBI-ProteinID: XP_071819481
LinkDB
Position
21:13305347..13315338
AA seq 348 aa
MADKEQAETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTSQWLPEVTKPED
KDYTVHRLVLGTHTSDEQNHLVIASVQLPKDDVQLDASNYDNEKGEFGGFGSVNGKIEIE
IKINHEGEVNRARYMPQNPVIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDIRLRGHQK
EGYGLSWNPNISGHLLSASDDHTICLWDISNISRDTKVVNAKTIFTGHTMVVEDVSWHLL
HEAIFGSVADDQMLMIWDTRTDNTIKPSHSGDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKVAMTRKFQRPVFLGTISACSLKHISTILPVKNLIFPFEN
NT seq 1047 nt   +upstreamnt  +downstreamnt
atggctgataaagagcaggctgagactttcgatgatgcagtcgaagagagggtcattaat
gaagagtacaagatttggaagaagaacacaccattcctctatgatttggtgatgacccat
gccctggaatggcccagtttaacttcacaatggctgccagaagtcacaaaaccagaagat
aaagactacacagttcacagacttgttttgggtactcacacgtcagatgagcagaaccat
ttggtcattgccagcgtacagcttcccaaggacgacgtccagctcgacgcatccaactac
gataatgaaaaaggagaatttggaggatttggttcggtaaatggtaagattgagatagag
atcaagataaaccatgaaggagaagtaaacagagcaaggtacatgccacagaacccggtc
atcatagcaaccaagacaccatccagcgatgtacttgtatttgactacactaaacaccct
tccaagccagacccaagtggagagtgcaatccagatatcaggttgagaggtcaccagaag
gaaggctacggtctctcctggaacccaaacattagcggacatctcctgagcgcatcagat
gatcatactatctgcttgtgggacatcagtaacatttcacgtgacactaaagtcgtgaat
gccaagacgatattcacaggccatacgatggtggtggaggacgtctcgtggcacctcctg
cacgaggcgatctttggatctgtcgccgacgaccaaatgcttatgatctgggacactaga
actgacaataccattaagccaagccattctggtgatgctcacacggctgaggttaactgc
ctctctttcaatccgtacagtgaattcatcctcgccactggttctgctgacaagactgtt
gcattgtgggacttgaggaatcttaaagtggccatgacacgaaaatttcaacgtcctgtc
tttttgggaaccatctcagcatgctctctaaaacatatatcaaccattctgccagttaaa
aatttgatttttcccttcgaaaattga

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