Apostichopus japonicus (Japanese sea cucumber): 139963172
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Entry
139963172 CDS
T10891
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04137
Mitophagy - animal
ajj04141
Protein processing in endoplasmic reticulum
Brite
Enzymes [BR:
ajj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
139963172
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139963172
Multi subunit type E3
ERAD complex
139963172
LMBR1L-GP78-UBAC2 complex
139963172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139963172
NCBI-ProteinID:
XP_071819829
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Position
3:complement(11468123..11514354)
Genome browser
AA seq
715 aa
AA seq
DB search
MPLLILHPVPPLPPLPTYFAVTFLTLLWSVLQAREDISVFEQSGIAVMTASDVDPSLQTL
NLTHLFAIHEEDYVLLKYAKTMAHDSWSVLVLCNVAFCLLLVVGMALQWLIFGKLRDIER
QHVRDKLWNFAFYKFIVVFGVLNVQTLEEMIFWVAWFATFAFLHAFAQLSKDRFEYLSFS
PATTNATHVKVLALLASIFAVTSILGGLCLYVGHSYGWNLFLFMIAECALLAMRSLHVLL
KYGIHLYDLRYEGVWERRGMIVYYTELLMELLVLGVDLLHHIHMLLWGNVFLSMASLVIC
LQIRFLYNEIQRRVQRHRNYRKVVHNMETRFSTASQDELRENDDDCAICWEEMKTARKLP
CNHLFHDGCLRSWLEHETSCPTCRHPLNITRTEEETGRQAQVGNPPARPPRPPGLPTRVV
PGNNRRGGHFFHFDGSLIASWMPSFSVEVTHANAVRRIQIANRNSQLNNMANLVVQMFPR
VSHETAMNDLRITRSVELTVENILEGRLMETNVPQANPSSSDGVTSNPNSPASPDSEEES
YSHLLRPPNSSDTAEGSLIVQDHSATSSTWHQVTDSGDESRNNTPQSDNSSVNVPSYSQA
SSGTNSYGSSAARFSKSSEERQSMLLTRKERLLQEARRKYAESQLEIPVEDIPESSGGAV
HHSFDQSEELKSENNSNETSCARGEVDVEPQPEDELVRRRNAVLAATLRRLNQHS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcctgatactccatccagtgccaccattgcccccgttacctacatacttcgca
gtgaccttcttgacacttctttggtctgtgctgcaggcacgtgaagatatatcagtcttt
gagcaaagtggcattgctgtaatgactgcctcagatgtggatccaagcctgcaaactttg
aatctgacccatttatttgctatccatgaagaggactatgtcttacttaaatatgcaaaa
acaatggcacatgattcttggtcagtgttggtgttgtgcaatgttgcattttgtcttctc
cttgttgttggtatggcattgcagtggctgatatttggaaaactcagggacattgaaaga
cagcatgtcagagataaactatggaactttgcattttacaagtttattgtggtatttgga
gtgcttaatgtacagaccttagaggaaatgatcttctgggtggcatggtttgccacattt
gcttttcttcatgcctttgctcagctttccaaggacagatttgaatatctttccttttcg
ccagctaccactaatgccactcatgtcaaagttttggcactgttagccagcatatttgca
gtaaccagcatccttgggggactctgtctgtatgttggtcacagttatggatggaatttg
tttcttttcatgattgcagagtgtgcactgctagcaatgagatcattgcatgttcttttg
aaatatggaattcatttatatgatctccgctatgaaggagtatgggaaaggcgaggtatg
atagtttactatacagagcttcttatggaactcctggtgctgggtgttgatctgctacat
catatccatatgctgctttggggcaacgtctttctcagcatggccagtcttgtcatctgc
cttcagattcgatttctgtataacgaaattcaaaggagggtccaaagacatcgcaactac
aggaaagttgtccacaacatggaaactagattttccactgcatctcaagatgaactccgg
gagaatgatgatgattgtgccatttgctgggaggaaatgaaaacagccagaaagttgcca
tgtaatcatctttttcacgatgggtgtctgcgatcttggctggaacatgagacttcttgt
cctacctgtcgccatcctctaaatataaccaggacagaagaagaaacagggaggcaggct
caggttggtaatcctcctgcaagacctccaagaccacctggactacctaccagagttgtc
cctggcaataacagacgaggaggtcatttcttccactttgatggttccttaattgcttct
tggatgccgagtttctctgttgaagttacccatgccaatgcagtgagaagaatacaaatt
gcaaacaggaactctcagctcaataacatggcaaatctggttgttcagatgtttcctcgt
gtatctcatgagacggccatgaatgatctcaggataacacgatcagtggaactcactgtt
gagaatattttggaaggaaggctaatggaaactaatgttcctcaagccaatccatcttca
tctgatggggtaaccagtaacccaaacagtcctgcttctccagactctgaggaagaatca
tattcccatcttttgaggccaccaaattcttctgatacagcagaagggtctttgattgtt
caagatcattctgccactagctcaacctggcatcaggttacagacagtggggatgaatcc
agaaataatacacctcaatctgataactcaagtgttaatgtacctagctacagtcaagcc
agcagtggtaccaacagctatggcagctcagctgcaagattttcaaagtcttccgaagaa
cgtcaaagcatgctgctgacgaggaaagaaagactccttcaagaggcacgaagaaagtat
gctgaaagtcaacttgaaattccagtggaagacattccagagtcaagtggaggagcagtc
catcattcttttgatcaaagtgaggaacttaagagtgaaaataactccaatgagacctct
tgtgcaagaggagaggtagatgtggaacctcagccagaggatgagctagtcaggcgaagg
aatgctgttctcgcagcaactcttcgcagattaaatcaacattcctaa
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