Apostichopus japonicus (Japanese sea cucumber): 139963359
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Entry
139963359 CDS
T10891
Name
(RefSeq) ATP-binding cassette sub-family A member 2-like isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj02010
ABC transporters
ajj04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
139963359
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139963359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ajj02000
]
139963359
Transporters [BR:
ajj02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
139963359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
139963359
NCBI-ProteinID:
XP_071820129
LinkDB
All DBs
Position
22:complement(21924800..22009581)
Genome browser
AA seq
2496 aa
AA seq
DB search
MGFLHQLQVLLWKNYTLKKRNPLVVIFEIVIPLVLFFIIVAIRKNKPILLKQEAFFMAQP
LPSAGIIPVMQIFCPKAVRDPYGFPEHPKSQVTSFLNQLEDVINRNKMFNEEFDLKSIKM
LPDTFNDLIFYDGSIENKFANAGSFNLGSILKNETEFREFLKNNLSMSDSDADQIINHQM
NTPEVYKILYGSEPRNVSEDDGSTHNYTDYQEFINRRFGGLNHGALYRHESKSSIYSVTG
VLGILSGTPVGGPQSGSSEGEDSLSEGLVNSFEDSLFSPETLQDVLCNEETVHDLYNSDN
QTDFNTSRSFADATCNREDSYDIFESLSNELHDQIDTGKVLDLLNITDEELSRMKNMTAA
LMDELERFILFQDALQSLVAFAEILPADSCPEEPPPPPPHRAKPGPDDPVYETTSPVPVG
NVTLSAVNSTNVTESSNCSSPCNQSSTVSPPMALTTPSLTTPSTTTEPPPTLPPKPKDQK
AVTISMLYKLWVQMQERLCGDKVHVNQEVIDRGDYKELSKHLTSIQKRSLGLLLYVLFQN
PKIPYSPNTPDVNDLIDKASDFIYFAKNITFMAETWLNISHEVREYLHMNTTIMALEGLG
KLEKTLIAHPEFMQNVSMKPEVRNFILNDSLISPPLIEQNLDVLDNVACAWLSLVGPIKW
DIFVGFKNENDMVDFVLNKAASRNITVFASLVFDVDQDGNLPAHVVYKIRQNSSYTARTD
LIRRRFWQPGSEHHRVIGYYTYGFVWLQDIVERAIIDKRVGRRVTEPGGYVEEIPYPCYL
QDNFLFMIANIMPMIMVVSWVYYVAMLTRSIVYEKEQRLKEVMKMMGLSNGVHWVAWFIT
SMLQASVIVAAITAILHYGNILMHSNPVIVWITFTIFSASVIVFCFVISVFFSKAKLASA
CAGIIYFTTYVPCIYIQIREESLAYVTIPSQIKMMASIFSPTAFGLGARYFALYEIGGEG
VHWNNLFSSPVEHDDLNLFQLWIILLVDTVLYAIIVWYVENVYPGSYGLPRPWYFPLQYS
YWFSSSSGLTDGGNRPLSVTEEDQELLIRNEGITCEAEPSDLPLGVSIQNLTKIYKDGHK
VAVNKLSLNMYEGQITSFLGHNGAGKTTTMSVLTGLFPPTSGTAKIYDKDIRTDMLQIRK
SLGMCPQHNALFDGLTVEEHMQFYGLLKGLPKAEIKSLTDSLIQDIGLRSKRHKRVECLS
GGMQRKLSVAVAFVGGSKTVILDEPTAGVDPFSRRAIWDLLLKYKEGRTILLSTHHMDEA
DVLGDRIAIISHGQLKCVGSSLFLKTTYGSGYKLTVVKKPLAGFSSGTSTGSLNSSFHSN
CDARQVTRLIQRHVPKSAMVNETPQELTYSLPYEAVRQGQFPKLFAGLKEKRSSLDVLGF
GLMDSTLEDVFLKVAEMSADSGQDHKTPRSLRNFIPSVIRRLSSRSSSSSLTSSSESGSG
REVGAESIASFRIDEDDEPLINVQENEDNDDGTFFTDEGQSSHHLRGFVLVMNQFVALII
KRFHYIRRNQKSLFSTLLLPALYVTLAMSVALSAPHISDLPSIILSPSQYHVLEYPDSNM
IPYINDAISNSREEYRTYSSISGDVGPVKIVSSLTYPAGIGASCVLKTPFNGTLDRLVEM
ANFSSINLTAQYFDSMCVESFQKGKPLSNYLPRTTEADDNDGWINQEARHTDNTLAVTTM
PGNGNETDHAKKGSHSSHLTPEKICYCKEDGYGFSCPTNVGSPYPPEHKVITSDVLLDCN
NRNLSEYMLYTTDKYRLHRYGALSLGNVRKFVPPQFSNDVPKLYRKIAVRNVAIAWHNDK
GYHSLPTYVNVLNNAILRANLHPSKHGNPSGYGMTVINHPMNKTGWSLTDDFIQQESTEV
LIAIFIIIAMSFVPASFVIFIVTERSSKAKLVQFLSGVSPLVYWTSNFFWDMMSYLVPAV
CCISILKIFDIPAYASSTNLPAVILLFLLYGFSITPMMYPASFFFSVSSSAYVFLIVINL
FTGITTIVGSFLLEIFTHDDPEVSESFQAAYNIVHNISLIFPNYCLGRGLMDLAFNDYMN
EYFIKIGDLDSVQSPFRWEMMNRMYVVMAIEGFLAFVLVVLSEYGFFYMGRRVNAHKALI
PQEDEDVLRERQRVLNNETEKDILVLKNLTKIYKTRKLGKHLAVDGLCLGVPPGECFGLL
GVNGAGKTTTFKMLTGDERITGGNAFISNSSVRWRLHKNIGYCPQFDALFEELTAREHLL
FYSRLKGIPRRQESKVVNWAIQKLALSEYADVPSGLYSGGNKRKLSTAIALIGYPPVIFM
DEPTTGMDPHSRQFLWKVIQRIVKEGKSVVLTSHSMEECEALCNRMAIMVNARFKCLGST
QHLKNRFGDGYTITLKIKGDRPNLSQVSQWFSHTFPKAELKEEHYNVVQYSMKLVHVNLE
ELFTKLEDIKEMLSIEDYSVSQTTLDNVFVNFAKEQMDQQEEVLKDDTKRFRWRHHQDKT
LDESDLCLDETEDDDEEFLLQYATFKDSRLTFDLEE
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctacaccaacttcaagttttgttatggaagaactacactttgaagaagagg
aatccacttgtggtcatttttgaaatagtgattcctctggttctgttcttcatcatcgtt
gccatcaggaaaaacaaaccgattctactgaaacaggaagctttcttcatggcccagcca
ctaccctctgctggtatcataccagttatgcaaatcttttgtcccaaagcagttagagac
ccctacggatttccagagcatcctaaatcacaagtcacttccttcctgaaccaattggaa
gatgttatcaaccgaaataaaatgttcaacgaggagtttgacctgaagtccatcaagatg
cttccagatactttcaacgacctcatcttttacgacggctccattgaaaataaatttgca
aacgccgggtcttttaatctgggatccatcctgaagaatgagaccgaattcagagaattc
ttaaagaataatttatccatgtcagattcagacgcagaccaaattatcaaccatcaaatg
aatacaccagaggtttataagatactgtacgggtctgaaccgaggaatgtatccgaggat
gacggtagcactcacaactacacagattaccaagagttcatcaacagacgatttggcggc
ctcaatcacggggccctgtacagacacgaatctaagagcagtatttacagtgtaacgggg
gtccttggcatactgtccgggaccccagtaggtgggccacaatctggatcatccgaaggg
gaagacagtctctcagaagggctcgtcaacagctttgaggactccttgttcagcccagag
actctacaagatgtcttgtgcaatgaagagaccgttcatgatttatacaactccgacaac
cagactgattttaatacctcgaggagctttgcagatgctacttgcaacagggaggactct
tatgatatctttgagagcctctcaaatgaacttcatgatcaaatcgatacaggaaaagtt
cttgacttgttgaatattaccgatgaagaattgtcaaggatgaagaatatgaccgctgct
ctgatggatgagcttgaacgattcatcctgttccaggatgctttgcagagcttggtagct
tttgccgagattctgcctgctgattcgtgcccagaagaaccccctccgccccctccccac
agagcaaagcctggacccgacgaccctgtctatgagactacatccccggttcccgttggg
aatgtcaccctgtcagcggtgaactctaccaacgttaccgagagctccaactgttcgtca
ccctgtaaccagtcttcgacggtatcaccgccaatggccttgactactccttcactcacc
accccctcaactaccactgagccaccacccaccctgccccctaagcccaaggaccagaag
gcagtcactatcagtatgttgtacaagctctgggtgcagatgcaagaacggctgtgcggg
gacaaggtccatgtgaaccaggaggtgatagaccggggtgactacaaggagctctccaag
cacctgacctcgatccagaaacgtagcctgggtctcctgctctacgtactcttccagaat
ccaaagatcccgtactcaccgaacacaccggatgtaaacgacttgatcgacaaggctagc
gatttcatctattttgccaagaacatcaccttcatggctgagacctggctgaatatatca
catgaagtgagggagtacttgcatatgaatacaaccatcatggctctggagggtcttgga
aagttggagaaaaccctcatcgcgcatccagagttcatgcagaacgtcagcatgaaaccg
gaagtacgtaacttcatcctcaacgactccctgatctccccgcctctcatagagcagaac
ctcgatgtcttggacaacgtggcctgcgcgtggctgtcgctggtgggcccgatcaagtgg
gacatcttcgtcggcttcaagaacgagaacgacatggtcgatttcgtcctgaacaaggca
gcttcgagaaacatcactgtatttgcaagcctcgtctttgatgtcgaccaagatggtaac
ctccctgcacacgtggtttacaagatccggcagaattcaagttacacggccaggacggac
ctgatccgtcgccgtttctggcagcctggctcggagcatcacagagtcatcggctactac
acctatggattcgtttggctgcaggacatcgtcgagagagccatcatcgataaaagagtg
ggcagacgagtcactgaaccgggcggttacgtggaggagataccttatccatgttatctg
caagataactttctattcatgatagccaacattatgccgatgattatggtcgtgtcttgg
gtctactatgtggccatgttaaccagaagcattgtgtatgagaaggaacagaggttaaaa
gaggtcatgaagatgatgggtttgagtaacggcgttcattgggtggcctggttcatcacc
agcatgctgcaggcctccgtcatcgtcgcggcgatcacagccatcctccactacgggaat
attttgatgcacagcaatccagtcatcgtgtggatcaccttcactatcttctctgcatca
gttattgtcttttgctttgtgattagtgttttcttctccaaggccaaattggcttctgct
tgcgctggcatcatttacttcaccacgtacgtaccttgcatctacattcaaatcagagag
gagtcactggcgtacgtcaccatcccctcacagattaagatgatggcttcgatattctct
cctactgcgtttggcctcggagctcgttattttgccctctacgagatcgggggcgaaggc
gtccactggaataacctcttcagcagtccagtagagcacgacgacttaaacttatttcaa
ctctggatcattctgttggtggacacggtactgtatgccatcatcgtctggtacgtggaa
aacgtctatccaggatcctatgggctccccagaccttggtactttcctttgcagtattcc
tactggtttagtagttcctcagggttgaccgatggaggaaacagaccattgtcagtcacg
gaggaagatcaggaattgttgatcagaaacgaaggcattacttgtgaagcagagccttct
gacttacctctcggtgtctctattcagaatctcaccaagatttacaaagacggtcacaaa
gtagcagtgaataagctgagtttgaatatgtatgaaggtcaaattacatcattcctgggt
cacaacggagccggaaaaaccacaaccatgtccgtcctcaccggtctgttcccgccgacg
tccggcacagccaagatctatgacaaggacatccgcacggatatgttacagattcgaaag
agtctggggatgtgtccccagcacaatgctttatttgatgggctcacagtggaggaacat
atgcagttctatggtttgctgaaaggtctacctaaggcggagataaaatcactcaccgac
agtttaatacaggatattggtttgagatcaaaacgccacaagagggtggaatgcttgtcc
ggtggcatgcagagaaagctgtcagtagctgtggccttcgtgggcggctccaagacggtc
atcctagacgaacccacggcaggcgtggacccgttctcgaggagggccatttgggacctc
ctactaaagtataaggaaggtcgtacaatcttgctcagcactcaccacatggatgaagcg
gatgtcttaggtgaccggatcgctatcatctctcacggacagttgaaatgtgtcggctct
tcactcttcctcaaaacaacctatggatctggatacaagctaacggtcgtgaaaaagcct
cttgcagggttttcgtcaggaacctctacgggcagtctcaactcttcattccattcaaac
tgcgatgcgaggcaggtcacacggttgattcagagacacgtaccaaaatccgccatggtc
aacgagactcctcaggagctgacatactctctaccgtacgaggcggtaagacagggccag
tttccaaagctgtttgcagggttgaaggaaaagcgatcatcgctggatgtgttagggttt
ggtttgatggattccaccttggaggatgtcttcctgaaggtagctgagatgtctgcagat
tctggacaagatcacaaaacaccccgatctctgcgtaacttcatcccatctgttatacga
aggctgtcttctcgtagctcaagctcgtctctgacgtcttcatcagagagtggctcagga
cgagaggtaggagcagaatcgatcgcgtcattcagaattgatgaagatgatgaaccactg
ataaatgtccaagaaaatgaagataacgatgatgggacattcttcacagacgaagggcag
agtagccatcacctacgaggatttgtcttagtaatgaaccaatttgtcgccctcatcatt
aagcgctttcactacattcgacgcaatcagaagagcctcttctccacgttgctgctgcct
gcgctgtatgtcaccctggcgatgagtgtggctctctccgctcctcatatcagtgacctt
ccctccatcattctgagtccatctcagtaccacgtcttggagtaccctgacagcaacatg
atcccttacatcaacgacgccatctccaacagccgcgaagagtacaggacttattcctcc
atcagtggagacgttggccccgtgaagatcgtctcttccctgacctacccggctggaatc
ggagctagctgcgtcctgaagacgccgttcaatggaaccctggataggctggtagagatg
gccaacttctccagcattaatctgacagctcagtactttgactccatgtgtgtggagtcc
tttcagaaagggaaacctctgtcgaactacttacccaggacgaccgaagcggacgataac
gatgggtggatcaaccaagaagctcggcatactgacaacactttagctgtaacaaccatg
ccaggaaatggaaatgaaactgatcatgccaagaaagggtctcattcaagccatttgaca
ccagagaagatatgctactgcaaggaggatggctatggattttcatgcccgacaaatgtg
ggatcgccatatccaccggaacataaagtgattaccagcgatgttctactggactgtaac
aaccgtaatctctcagaatacatgttgtacactactgataaatacagattacacagatat
ggcgcactttccttgggcaatgttcgtaagtttgtgccaccacagtttagcaatgatgtt
ccaaagctgtaccggaagatagccgtgcgtaatgttgccatagcatggcacaatgataaa
gggtatcacagccttccaacctacgtcaacgtattaaacaacgccattctaagagccaac
ctacatccctccaagcacggcaatccctcaggatatggaatgacggttatcaatcacccg
atgaataagactggatggtccctcactgatgatttcattcaacaagaatcaacggaagtt
ctgatagctattttcatcatcatagccatgtcctttgtgcctgctagttttgtcatcttc
atcgtcacagagaggtcctccaaagctaagctggtccagttcctcagtggtgtcagtcct
ctggtttactggacttcaaactttttctgggacatgatgtcttatctagttccagctgtt
tgttgtatcagcatcctaaagatcttcgacattccggcgtatgcttcatcgaccaatctc
ccggcggtcatcttactcttccttctctacggattttccataacgcccatgatgtaccca
gcttcattcttcttcagtgtctcaagctctgcctatgtttttctcatcgtaatcaatctc
ttcaccggtatcactaccatcgtcggttccttcttgttagaaatcttcacccacgatgac
ccggaagtcagtgagagctttcaggctgcgtacaacattgtgcacaatatttcactgatc
tttccaaattactgcctgggcagaggtctaatggacctagccttcaacgattacatgaat
gaatatttcatcaaaattggggatctagacagtgtccagtcacccttccgctgggaaatg
atgaatcgcatgtatgttgtcatggcgattgaaggctttctagcctttgttctggtcgtg
ctcagtgaatacgggtttttctacatgggaaggagagtcaatgctcataaagctctgatt
ccacaagaagacgaagatgtcctccgagagaggcagagagtcctgaacaacgaaacagaa
aaggatattttagtactcaaaaatttaacaaagatttacaaaaccaggaagctgggaaaa
catttagcagtagacggcctctgcttaggcgttccaccaggagagtgctttggtctttta
ggggtcaatggagctggaaagacaactacatttaaaatgctcacaggtgacgaacggata
accggaggtaatgcctttatcagcaattcaagtgtaaggtggagacttcataaaaatata
ggatactgccctcagtttgatgctctctttgaggaattgacggccagagaacatctgctc
ttctactcacgattgaaaggaattccgagaagacaggagagcaaggttgttaactgggca
attcaaaaactagcattatcagagtatgcggatgttccgtcaggtctttatagtggagga
aataagaggaagctatcgactgccatagccctgattgggtatcctccagtcatcttcatg
gatgagcccacaacgggcatggatccacattccagacaatttctatggaaggtaatacaa
aggatcgtcaaagaaggcaagtcggtggtgttaacatctcatagtatggaggaatgcgaa
gccctctgtaaccgtatggccatcatggtcaacgccaggtttaaatgtctagggagtacc
caacacttaaaaaacagatttggtgacggttacaccataactctgaagatcaagggagac
aggcccaacttatcgcaggtctctcagtggttcagtcacacatttccaaaagcggaactc
aaggaagagcattacaacgttgtgcaatacagcatgaaattagttcatgtaaatcttgag
gaattattcaccaagctagaagacatcaaagaaatgttaagtatagaagactactccgtc
agtcagacgaccttagataacgtttttgtcaattttgccaaagagcaaatggaccagcag
gaagaagtgttgaaagatgatacgaaaaggttcagatggagacaccatcaggataagacc
ctggatgagagtgacctctgtctggacgaaaccgaggacgacgacgaggaattcctctta
cagtatgcaacgttcaaggactcgaggctgacctttgacctggaagaatga
DBGET
integrated database retrieval system
