Apostichopus japonicus (Japanese sea cucumber): 139963449
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Entry
139963449 CDS
T10891
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase Rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ajj01009
]
139963449
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajj03021
]
139963449
Enzymes [BR:
ajj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
139963449
Protein phosphatases and associated proteins [BR:
ajj01009
]
HAD phosphatases
Fcp/Scp phosphatases
139963449
Transcription machinery [BR:
ajj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
139963449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
zf-C6H2
Motif
Other DBs
NCBI-GeneID:
139963449
NCBI-ProteinID:
XP_071820317
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All DBs
Position
22:complement(3420414..3483487)
Genome browser
AA seq
560 aa
AA seq
DB search
MDDYEKRYKEVAEILDERLEPHRKAVKIVERLTEKSVDEDFFKSCATFLMPSHYTDAVEE
RSLEKLCGYPLCDHPLEETKQKYRISMKTNKVYDMSERKFFCSQSCFKASKYYQAQMASS
PLWSRPREKQLEIKLLKEGERLPSSDEPLDSMIVRLRVTEDEIEKPKKEAVTTGDVDDLI
QDLSYLRLHDSKGQRKRYEEFENKELEQERLQKMKEKAKGRTLRKDCADSSVGVDNTPQH
ENGKFPTATETEVNLGGRRTSDNSEVKNEEQEETHRKGINPGIKIIQQVSQCLTEWRTSK
TVIYLNENKERRDCSQATSADVKMDVGSSRGKEEGKRGKVLRNEEKRVDNVMDGLLSIKE
EREDERNVQGVVTYAASNPVPNIDQLRGETDLFTLKVNQFYSLKPDKLQPSAEAKEKKTK
SSDKEKSNEPGRNITLPPVDSQSQMLIRQKIFLSKLHNVLRDLLPTLGMSVQDISANLRD
LVVTFNLSSRNITFKPAGWTLVSLCLLHILALREAAIHNKLTNPRSQQFLQVVWKQYSIS
GDEVGRLVSQFIHGDDSSTS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggatgactatgaaaaaagatacaaggaggtagcagagattcttgacgaaagattagag
ccacatagaaaggctgttaagatagtagagagattgacagagaaatccgtagatgaagat
ttcttcaaatcttgcgcaacttttctaatgccatctcactacactgacgcagtagaggag
agatctctggagaagctctgtggctacccactgtgcgatcatccgttagaggagacgaaa
cagaagtaccgtatatcaatgaagacaaataaagtttatgatatgtctgaacgaaagttc
ttttgtagtcaatcctgtttcaaagcatcaaagtactaccaagcacaaatggcttcatct
ccactgtggtctagacctcgagaaaagcaattggagataaaactacttaaagaaggtgaa
aggttgccctcttcagatgaaccattagacagcatgatcgtaagactgcgagtgacagaa
gatgagatagagaaaccaaagaaagaggcggtaaccaccggcgatgtagacgatttaatc
caagatctctcatatttaagacttcatgattcaaaaggtcaaaggaagagatatgaggag
tttgaaaacaaggaattagagcaagaaagattgcaaaaaatgaaggaaaaagcaaaagga
aggactttaaggaaggactgcgccgactcgtctgtaggtgtagacaatacacctcagcac
gaaaatgggaaattccctaccgctacggagaccgaagttaatttaggaggtaggaggacc
tcagacaattccgaagtaaagaatgaggagcaggaggagactcatagaaagggaatcaat
ccgggcataaaaatcatacaacaagtaagccagtgtttgacggagtggcgaacgtcgaaa
actgtaatatatttgaacgagaataaggagaggagggactgtagccaagctacttctgca
gatgtgaaaatggacgtcggatcgtcaagggggaaagaggaggggaagaggggtaaggtt
ttgagaaacgaggagaagagagtggacaatgtgatggatgggttgttaagtatcaaagaa
gagagagaggatgaaaggaatgttcaaggggtggtcacctacgctgcatcgaatcccgtt
ccgaatatcgatcaactgcgaggagaaacagacttgttcactttaaaagtgaatcagttt
tattcactcaagccggacaaattgcaaccctctgccgaagcaaaggagaagaaaaccaaa
agttctgacaaagaaaagtcgaatgaacccggcagaaatatcacattaccccctgtagat
tcacagtcgcagatgctgattcgacagaagatatttctgagcaaactacacaatgtcctt
cgagatctactgccgactctggggatgtctgtgcaggatatcagtgccaaccttcgagac
ctggtcgtgacctttaacctcagttctcgtaacataactttcaagccagcaggttggacc
cttgtgtccctctgtcttcttcatattctggctttaagagaggctgccatacacaacaag
ctgacaaacccacgatcacaacagttcttacaagtcgtctggaaacagtacagcatttcc
ggtgatgaggtcggacgtctcgtatcacaatttatccacggcgatgacagttcgacatca
taa
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