Apostichopus japonicus (Japanese sea cucumber): 139963498
Help
Entry
139963498 CDS
T10891
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM45-like
KO
K12021
tripartite motif-containing protein 45
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ajj04121
]
139963498
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139963498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
zf-C3HC4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
DUF2457
zf-RING_5
ANCHR-like_BBOX
Invasin_D3
zf-C3HC4_3
DUF5344
Ig_GEX2_N
Motif
Other DBs
NCBI-GeneID:
139963498
NCBI-ProteinID:
XP_071820418
LinkDB
All DBs
Position
22:complement(20635684..20652663)
Genome browser
AA seq
691 aa
AA seq
DB search
MSDLLQPNSGGAKGSASIESGMSEHPLLQLTCGICKSRYTDPRLLPCLHSFCNLCIKTLD
SFILQGSTARESNRNAIILCPTCNTESAQPSSANGEFPVDFLLQKALLYDSFDSHNDNLT
CELCTDDAKAVSRCIECMVNICGFCCQAHKRQKKTANHNVVSFLEARRRSYQQLQCPVHC
PKHQQEELKFYCETCDYSVCRDCCLVEHREHLVEYVDDVGAHHKKVLNSLLSRLEPHIAT
VKEGIDASDKLEVSIAERATSIEVDIHQYFEDYIKALHKHKRTLLQNVTQISASRTKAVQ
SQKLQFQQILGDLQHTYEITSTALQDGNNTEILSIKPTLSQRLCDLLRISYQSPPFLQQA
SIQFKAKSLSESNNPFHIRGVISTCMADAGKSYADGEGLRRARVGEETIVSVTVLDDAGH
LLGDGGDDIQADIYSVDDIKKKFQCYVQDRGDGTYKLSYCLKELGSYILNVRVSGHHIKD
SPFSLSVRTPWKSHTGMWHCCTFCSSEGNKDVTCACGGTMPGGFRGCGHNHIGHPGSWHW
SCCASLDQDSVCSSKEPIIRSASQDNIVSMKGRLQRRATLAHADRIRMLQQHQQGMVGSV
RSDKPLRVRDHSPRRLRDPSPMRARDPSPMRVRDPSPTRFRDPSPMRFRDPSPMRSDTVD
RYQYNQSQYAHSATGSPSLNIDARSWKNVSF
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcttttacaacccaattctggtggtgcaaaagggtctgcttccatagagtct
ggtatgtctgaacatcctctcctacagctgacttgcggtatctgtaagagtcgctacaca
gaccctcgtcttctcccctgtcttcactcattctgtaatctctgcatcaagactttggac
tcttttatcctgcaaggaagtactgcaagagaaagcaataggaatgctatcattctctgc
ccaacctgtaatacagaaagtgcacaaccatcatctgccaatggggagttccctgttgat
tttttgcttcagaaggctctgttgtatgattcttttgactctcacaatgataacttgact
tgtgaactttgtactgatgatgccaaggctgtgtcaaggtgtatcgagtgcatggtaaat
atttgtggcttttgttgtcaagctcacaaacgccaaaagaagactgcaaaccacaatgtt
gtgagcttcttagaggcccgcagacgtagttaccagcaactgcagtgtcctgttcactgc
cctaaacatcagcaagaagagttgaagttttattgtgaaacttgcgattactctgtttgc
agggattgctgtcttgtagaacacagggagcatttggttgagtatgttgatgatgttggt
gcacatcataaaaaggttttgaacagtctcctgtcacggttggaacctcatattgccact
gtgaaggaaggtattgatgcttctgataaattagaggtatcaatagcagaaagagcgact
tccatcgaagttgacatccatcaatacttcgaggattacatcaaggcgcttcataagcat
aaacgcaccttacttcagaatgttactcagattagtgcctcaagaaccaaagctgtccag
tctcaaaaattacaatttcaacagattcttggagatctacagcatacttatgagatcact
tcaaccgccctacaagatggcaacaatactgaaatactatcaatcaaaccaaccctgtct
caacgcctttgtgacttactcagaatctcgtatcaaagtcccccatttctacagcaggca
tcgatccagttcaaggcaaagtctctatctgaaagtaataatccttttcacatcagagga
gtcattagtacctgcatggcagatgcaggcaaaagttatgcagatggagaagggcttcga
cgagcaagagtgggagaggaaaccattgtttctgtgactgtgttggatgatgctggacat
ctgcttggcgatggaggagatgacatccaggccgatatttactctgtggatgacataaag
aaaaagttccagtgctatgtacaagatcgtggtgatggcacatacaaactttcttactgt
ctgaaagaacttgggtcttacatcttgaatgtcagagtatcagggcaccacatcaaggac
agtccatttagtctcagtgttcgaactccttggaaaagccacacaggaatgtggcattgc
tgcacattctgctccagtgaagggaataaagacgtaacctgtgcatgtggaggcacaatg
ccaggtggattcagaggttgcggacacaatcatatcggtcatcctggatcatggcattgg
tcatgctgtgcttctcttgaccaggactcggtctgtagcagtaaagagccaattattcga
tctgcgagccaagataacatcgtttccatgaaaggaaggttgcaacggagagctacactg
gcccacgctgatagaatcaggatgctacaacagcatcaacaaggcatggtaggctcagta
agaagtgataaaccattgagggtaagagaccacagtccaaggagactcagggatcccagt
ccaatgagggctagggacccaagtccaatgagggtaagggacccaagtccaacgaggttt
agggacccaagtccaatgaggtttagggacccaagtccaatgaggagtgatacagttgat
aggtaccagtataatcagagtcagtatgctcacagtgcgactggatcccccagtctaaat
attgatgccaggtcatggaagaacgtgtccttctga
DBGET
integrated database retrieval system
