Apostichopus japonicus (Japanese sea cucumber): 139964219
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Entry
139964219 CDS
T10891
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1-like isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139964219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ajj04812
]
139964219
Cytoskeleton proteins [BR:
ajj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
139964219
Intermediate filaments
Intermediate filament-binding proteins
139964219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_6
EF-hand_7
SH3_9
EF-hand_8
EF-hand_5
SH3_2
GvpG
SH3_10
Tetrabrachion
Motif
Other DBs
NCBI-GeneID:
139964219
NCBI-ProteinID:
XP_071821745
LinkDB
All DBs
Position
22:11141521..11212237
Genome browser
AA seq
2469 aa
AA seq
DB search
MTERSEVRILETADDIADRRKQVLDKYEQFKHLAKQRREKLEASREFQFFRRDADELETW
ILEKLQTASDESYRDPVNLQAKLQKHQAFEAEVHAHSKYIEQLDEAGGKMINESHFQSDI
VDARLIELHRLWDLLLLKLREKGIKLLQAQKLIQFFRIHEQVMFWIHDKELIAASTDLGV
DLEHVEVLRKNFQEFNKDLEAHVGEVNKVNEVAEELVADQHPETETIQDKQKEMNDAWDR
LRMLAQVRCEKLDGALEIQTFNRDADETISWINEKDTLLSTDDYGRDLPTVQALQRKHDG
LERDLNALEDKVTVLCEEADRLESSHPDSTLDIQSKKDEIANNWENLRSKADDRKVKLDE
SQKLQRFLTDYRELNVWVVEMRTIITSEELAKDVPGAEALIERHQEHKSEMDAHEDNFKN
VADEGQALLDADHPASEDVKEKLVTLAEEKRNLEDLWDERNKKYDQCMDLQLFYRDTEQA
NTWMAKQETFLQNEDLGDSIDQVEALIKKQENFQKTLNAQEDKIKALDEFATKLIENDHY
ASPDVEQRRDALLDRRHALIDRSDNRSKLLEDSLRYQKFDRDADEVESWIRDKLKITMDE
SYKMTRRNESGRLSLIVDPTNLQGKRQKQRAFEDEVNANQERLDKVKGSGEDMISDEHYA
SPEIQRRIEELLNLWAQLLQEMEKKATRLGEADKGLQFARNVDTVDIWLSEIDGQLASED
IGKDLSSVENLKKKFQKVEEEIMAKEEVIQMTQATSLEYAVADHFDKDAIAEKEKVVVQK
YEALRAPLEARKKKLEDAHRLHEFLHDCDDEEAWIREKEPIASSTNLGKDLFGVQNLMKK
HQVLQAEIKGHEPRITAVRKLGEEMMLEGHFAKDEIESRLTNLDDKWNNLKDKADQREHD
LDDSLEAQQYFADADEGQDWLKSKEPIICSEDYGKDEDSAESLLMKHDVLMSDLEAYKPT
IDQLRNQAEECKYDPLLAKSTRAGDNQQQLPVSDDVSKELVVALYDYTEKSPREVSMKKN
DILVLLNSANKDWWKVEVHDRQGFVPAAYVKKLDAAQSASQSNLVEEPSNIMARQDQLEN
QYDKLKDAGEDRRQKLEEAVKRYALIREANDLIQWVKDKEAVARAEEFGDDLEQVEVMQK
KFDDFQKDLKANEGRLLEINRTLQDDINVEPTPEAQAVVEKIEELNNRWTDLQKAADDRS
ESLGTAHEVQRFFRDADETKDWIDEKNTALNTDDLGNDLHKVQALQRKHQGLERDLNALE
KQVQNLDETAVRLCETHPDQEEPIKAKKAEIDEAWHTLQDRANGRRDKLVDSHDFQRFLS
DYRDLKSWVNGMMVLVSSDELAKDVTGAEALLDRHRELHTEMESKAGTFQAFEAFGNQLI
MNHHYSSPEIQEKLDDLSQEKEALDRAWNDRRVKLDQCQELQLFLRDCEQAESWMASRES
YLASEEVTENLDSVEALIKKHEDFDKAIAQQESKINALASFADQLVNAGHYDGPYISEKK
DEVLARWQKLKEALIEKRSKLGESHTLQQFSRDADEVETWIMEKIQVATDESYLDPSNIQ
SKHQKHQAFEAEVAANAERIQAIMAVGQRLIDNHQCAGTENAVQNRIVTIGDQWEYLTKE
SATKSMKLKEANKQQTFNISVKDIEFWLGEMENTLSSEDVGRDLASVQNLMKKHSLLEDD
INAHEDRINVLNSQADQFIEAGHFSPEVIKETKITINVRYTKIEELKRGCERIRTLCVVR
RTRLDESHRIFAFFRDIEDEETWIKEKKLLTMSDDFGRELTGVQNLRKKHKRLEAEITAH
EPAIQDVLQNGDWVKQAVKEKGEQLMLDIDMNEEVQKRLDHLQESWDNLRDLSEVRGRKL
DESLAYQEFLAGADEEEAWINEKQHVLSSEDYGDTLAAVQGLQKKHRAFDTDFGVHKDRV
DDIKNKGDELVNSENFNAEAIGQRCDDLSKRLEELRLAAERRKAKLDENSAFLQFIWKAD
VVESWIAEKESFVRSDDYGRDLSTVQTLLTKQETFDAGLQSFEKEGIQQITTLKDKLVAS
DHAQTQAIQDRHASLIKRWEKLLADSNDRRQRLLRAQEQYQEVEDLFLLFAKKASAFNSW
FENAEEDLTDPVRCNSVEEIKALKKAHEAFCASLSTAQNDLKQLAALDKQIKSYNVTSNP
YTWFTMDSLEETWRNLQKIIKEREVELNKETERQDENDRLRKQFAQMANSFHQWLTETRD
FVSDRTILAAMVEESGNLENQLDNLKEKIKEVRAEKTQVKKIEELGAKMEERLILDNRYT
EHSTVGIAQQWDQLDQLGMRMQHNLEQQIQARNMTGVSEESLKEFSMMFKHFDKDKSGKL
DHPEFKSCLRSLGYDLPMVEEGQDDPEFQAILDAVDPNRDGFVSLQEYMSFMISRETENV
SSRDEIEKAFKALSSEGKLFVTKQELYANMPTKLAEYCILNMHPFKDGKGRELPNALDYV
EFTNRIFQN
NT seq
7410 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaggagtgaagtcagaatcctggagacggccgatgacatcgccgacaggaga
aagcaggtgctggacaaatatgagcagttcaagcacctagccaaacagaggagggagaaa
ttggaagcttccagagaatttcagttcttccgaagagacgccgatgaactagagacatgg
atcttggaaaaattgcagacagcctcggacgaaagctacagggatcctgttaatctgcag
gccaagttgcagaaacatcaagcctttgaagcagaggtccatgcccattctaagtacata
gaacagctcgacgaagccggcggtaaaatgatcaatgagagccacttccagtcagacatt
gttgatgcacgtctgattgagttacacaggctctgggacctactgctgttgaaactgagg
gagaaaggtatcaagctcctccaggcgcagaagctcatccaattcttccgcatccacgag
caggtcatgttctggatccacgacaaggaactcatcgcggcgtcaacagacctcggtgtt
gatctcgaacatgtggaagttctcaggaagaatttccaagaattcaacaaggacttggag
gctcatgtgggtgaagtgaacaaagtcaacgaagtggctgaagagcttgtggctgatcag
catccagaaacagagaccattcaagataaacaaaaggaaatgaacgatgcctgggacagg
ctcagaatgctcgctcaagtcagatgtgagaaattggatggagcattggagatccagaca
ttcaacagagatgctgatgagaccatcagctggattaacgagaaggacaccctcctctcc
acggacgactacggccgagatctccccactgttcaagccctgcagcgtaaacatgatggc
ttggaaagagacctcaacgctctggaagataaggtcactgtcctctgcgaagaggcagac
aggttggaatcctctcatcccgacagcactcttgatatacaaagcaagaaagacgaaatt
gcaaacaactgggagaatttgaggtcaaaggctgatgaccgtaaggtgaagctggatgaa
tctcaaaagttgcaacgattcttgacggattacagagagctgaatgtctgggtggttgag
atgagaaccatcatcacatcagaagaactcgccaaggacgtcccaggagcagaggcgttg
atcgaaagacaccaagaacacaagagtgaaatggatgctcacgaggataatttcaagaac
gtggcggacgagggacaggctctgctggatgctgaccatcccgcctctgaggatgtcaag
gagaagcttgtcaccctggcagaggagaagaggaatctggaagatctctgggacgaacga
aacaagaaatacgatcagtgcatggacctgcagctgttttacagggacactgaacaagcc
aacacatggatggccaagcaagagacattcctacaaaatgaggaccttggagattccatc
gatcaagtggaggccctcatcaagaaacaggaaaatttccagaagactctcaatgcccaa
gaagacaaaatcaaggctctggatgaatttgccacaaaactgatcgagaatgaccactat
gcatctccagatgtagaacagcgtagggatgcactgctcgaccggcgccatgccctcatt
gataggtcagataatcgcagcaaactgttggaggactcgctgcgctaccagaaatttgac
cgtgacgcagacgaagtcgagtcctggatccgggataaactgaagatcaccatggatgaa
tcatacaagatgactagacggaatgagagcggtcgactcagcttgatagtggatcctacc
aatctacagggtaagagacagaagcagagagcgttcgaggatgaggtcaacgccaaccag
gaacgactggacaaggtgaagggtagtggggaggacatgatttctgacgaacactacgca
tctccagagattcagaggcgaattgaggaacttctcaacctctgggctcagctcctgcaa
gaaatggagaagaaagctactcgcctcggtgaagctgacaaaggtcttcagtttgctcgc
aacgtggacacagtcgacatatggctgtccgagatcgacggacaactggcatctgaagac
attggcaaggatctgagcagtgttgagaatttgaagaagaaattccaaaaggtggaggag
gagatcatggccaaagaggaagtgatccagatgacccaggctacctctctggagtacgca
gtggcagatcactttgacaaggacgccatcgcagagaaggaaaaagttgtggttcagaag
tatgaagccctcagggctcctctggaggctcgtaagaagaaactggaagatgcccaccgc
ctccatgaattcctccacgactgtgacgatgaagaggcctggatcagagagaaagaacca
atcgcttcctctaccaaccttggcaaggatctctttggggtccagaacctgatgaagaaa
caccaggtgttgcaggccgagatcaaaggtcacgaacctcgtatcaccgctgttcgaaag
ctgggagaggagatgatgctggaaggtcacttcgccaaggatgaaattgaatctcgtctg
accaacctggacgataagtggaataacttgaaggacaaagctgatcagagagaacatgac
ttggatgattctctggaagctcagcagtatttcgcagatgctgacgaaggccaggattgg
ctgaagagtaaggaaccaatcatctgcagtgaagactacggtaaagatgaggacagcgct
gagtccctgctcatgaagcacgatgtattaatgtctgacttggaagcttacaaaccaacc
attgatcagctccgtaaccaggccgaagagtgcaagtatgaccctctacttgcaaagagt
actagggcaggtgataaccaacagcaattgcccgtgagtgatgatgtcagcaaagagttg
gtggtagctctatacgattacacagagaagagtcctcgagaagtctccatgaagaagaat
gacatcctggtactgctcaacagtgctaacaaggattggtggaaagtggaggtccatgac
cgtcaaggattcgttccggccgcgtacgtcaagaagctggatgctgcacagtctgcctct
caatctaatctggttgaggagccgagcaacatcatggcaagacaagaccagctggagaac
cagtacgacaagttgaaggatgccggcgaggatcgtcgccaaaagttggaggaagcagtg
aaacgctacgccctcatcagagaagctaatgacctcattcagtgggttaaggacaaggaa
gctgttgccagggctgaagaatttggtgatgacttggagcaagtggaagtgatgcagaag
aaatttgatgatttccagaaggacttgaaagcaaacgaaggtcgtctactggaaatcaac
cgaactctgcaggacgacattaacgtcgagccaacgccagaggcccaggctgtggtcgag
aaaatagaagaactaaacaacagatggactgacttgcagaaggctgccgatgatcgctct
gagagcttgggtacagcccacgaagtgcaacgtttcttcagggatgctgatgaaaccaaa
gactggatcgatgagaagaacactgccctcaacaccgacgatcttggtaacgatctgcac
aaagttcaggccttgcagcgcaaacaccagggcttggagagggacttgaatgcacttgag
aaacaggtgcaaaaccttgatgagactgcagtccgactctgtgagactcatccagatcaa
gaggaaccaatcaaggcaaagaaagctgagattgatgaagcctggcacaccctccaggac
agggccaacggtcgccgtgacaagttggtggattcccacgactttcagcgtttcctgagc
gactatcgcgacttgaagtcttgggtgaacggcatgatggtcctggtctcgagcgatgaa
ctggcaaaggatgtgactggtgcagaggcacttctggaccggcatagggagcttcacact
gagatggaatctaaagcaggaaccttccaggcttttgaagcctttggaaaccaacttatc
atgaatcaccattactcatctcctgaaatccaagagaaattggacgacctgtcacaggag
aaagaagctttggatagggcctggaatgaccgcagagtgaagttggaccaatgccaggag
ctgcagttgtttctacgagactgcgagcaagccgagagttggatggcctcccgtgagtcg
tacctggccagcgaggaggtcaccgagaacctggacagcgtggaggcgctcatcaagaaa
cacgaagactttgacaaggccattgcccagcaggaatcaaagatcaatgctctagcctcg
ttcgctgatcagctggtaaacgccggccactacgacggaccgtacatctctgaaaagaag
gatgaggtccttgccaggtggcaaaagctgaaggaagctttgatcgagaagaggtccaag
ctgggagaatcccacacccttcaacagttcagccgagatgcggatgaggtggagacctgg
atcatggagaagattcaggtagcaaccgacgaatcgtacctggaccccagcaacatccag
agcaagcaccagaaacaccaggcatttgaggcagaggttgcagctaatgcagagagaatc
caagccatcatggctgtaggacaaaggttgatcgacaaccatcagtgtgcaggcacagag
aatgctgtccagaatcgcatcgtaaccatcggcgaccagtgggagtatctcactaaggaa
tcagctaccaaatcaatgaaattgaaggaagccaacaagcagcagacattcaacatcagc
gtcaaggacattgaattctggctcggagagatggagaacaccttgtcctcggaggatgtc
ggacgcgatttggcatccgtccagaatctcatgaagaaacactctctgcttgaagatgac
atcaatgctcatgaggaccgcatcaatgtactcaattcccaagccgaccagtttattgaa
gccggacatttcagccccgaggtcatcaaggagaccaagataacaataaatgtccgttac
acaaagatagaggaattgaaaagaggttgtgaaaggatcaggacgctctgcgtggtgaga
cgtaccaggctggacgaatctcatcgcatctttgctttcttccgtgacatcgaggacgag
gagacctggatcaaagagaagaaactactgaccatgtctgatgactttggtcgtgagttg
actggcgttcagaacctgaggaagaaacacaagcgtctggaagccgagattacagcccac
gagccagctatccaggatgtgcttcaaaatggtgattgggttaagcaggctgtgaaggag
aagggtgagcagctcatgttggacattgacatgaatgaagaggtccagaagagattggat
cacctccaagagagctgggataacctcagagatctctctgaagtcagaggtcgtaagttg
gatgaatctctggcctaccaggagttcttggctggagctgacgaggaggaggcttggatt
aacgagaagcagcatgttctctccagcgaagactacggggatactctggccgccgtccag
ggactgcagaagaaacacagagccttcgacactgacttcggtgtccacaaggaccgtgtg
gatgacatcaagaacaaaggagacgaactcgttaacagcgaaaacttcaacgctgaggcc
atcggccagcgatgtgacgacttgagtaaacgcttggaggagctccgtctggccgcagaa
agacgcaaggccaaactggatgagaactctgctttcctgcagttcatctggaaagctgat
gttgtagaatcttggattgctgagaaggagagctttgtccgttccgatgattacggccgt
gacctctccactgtccagactctcttgaccaaacaggagacattcgatgctggtctgcaa
tcatttgagaaggaaggaatccagcagatcacaacattgaaggataaactggttgcttct
gaccacgcccagacccaggctatacaggaccgccatgctagcctcatcaagaggtgggag
aagttgcttgccgactctaacgaccgtagacagcgtctcctcagagcccaagagcagtac
caagaggttgaagatctcttcctgctgtttgccaagaaagcctccgctttcaacagttgg
tttgagaacgccgaggaggatctcactgatcctgttcgttgcaactctgttgaggagatc
aaggctctgaaaaaagctcatgaagccttctgtgcttccctcagcacagctcagaatgat
cttaaacaactagctgccctggacaaacaaatcaagagctataacgtcaccagcaacccg
tacacctggttcaccatggactccctcgaggagacctggcgcaacctccagaagattatc
aaagaaagagaagtggaactgaacaaggaaacagaacgccaggatgagaatgaccgtctc
cgcaaacagtttgcccagatggccaactccttccaccaatggctgacagagaccagggac
tttgtctccgacagaacaatcttggctgctatggtggaagaatctggtaatctagaaaat
caactggataatctcaaggagaaaatcaaggaagtgagagccgagaaaacacaggtgaag
aagattgaggaactcggtgctaagatggaagagcgacttattctggacaacagatacact
gagcattcgactgtaggcattgctcagcagtgggatcaactggaccaacttggaatgagg
atgcagcacaatctagaacaacagatacaggcccgcaacatgactggtgtgagtgaagaa
tcactgaaggaattcagtatgatgttcaagcatttcgacaaagacaagagtggcaaactg
gaccacccagagttcaagtcctgtctgcggtccctgggttacgatctccctatggtcgag
gagggccaggatgacccagagttccaagccatattggatgctgtcgatcccaacagggat
ggtttcgtctctctgcaagagtacatgtccttcatgatcagtcgagagacagagaatgtt
tcctctcgtgatgagattgagaaggccttcaaggcgctcagctccgaaggcaaacttttc
gtcaccaagcaagaactttacgcaaatatgccaaccaagctggccgagtactgcattctc
aacatgcatccgttcaaggatggcaaggggcgggagcttcccaacgccttggactatgtg
gagttcaccaaccgtatatttcagaattag
DBGET
integrated database retrieval system
