Apostichopus japonicus (Japanese sea cucumber): 139964936
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Entry
139964936 CDS
T10891
Name
(RefSeq) alsin-like isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ajj03036
]
139964936
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
139964936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RLD
RCC1
RCC1_2
MORN
VPS9
PH_alsin
DH_Alsin
DH_ALS2
Alsin_RLD
HA_Alsin
RhoGEF
PH
Motif
Other DBs
NCBI-GeneID:
139964936
NCBI-ProteinID:
XP_071823124
LinkDB
All DBs
Position
23:complement(2468816..2518033)
Genome browser
AA seq
1680 aa
AA seq
DB search
MAENGEKLNDEKRELAKFQSKPYTWKGFLSSTVPTGFDIFNKKDVVKISLGNQHIAFLTS
DHAVYCSGSGEYGQLGHGKFTDVTKKPVLVSGLKGENVTDVVCGGDHTSVVCADGIVFCW
GNSAKGQCGTTEEKVNTPNLVTLADETCDPVVTQISCGDTHTLALTNQGQVWAWGTGPQL
GCGTGNSVVATPQKLDAFCGRNVLKISCGSTYSLAIVQKIKTLKTSSLQSNDTEEDGDSS
VCIACDEDAFSVHEEGDTLVVTDNHICIHDKKSVLSSVKSISPDSLDISIVPKKQNAIKE
LKERTSDDDNASQGTYTLEDEGFAASQADTEILRETDMDEVDVSFKEERNDQPSRPCDLS
ASSSSSKRLPLDTSAKQFLLRQMRPVKLVSSLPHGQRTSSRDKIFNFVPRMLVSGIERIV
SPQSSFLGNLKAMVPGSMGSHRSIPAITTRHSSVSVEADLSPFKSQYDDVFDDPLLQTEV
WSWGRGTMGQLGQGDTLERNSEILLETRPHPVIIKQLSAKGIVNIYAGVTHCIAVASSGL
AFSWGASSDGQLGHTGQLVPKKVKMPGSTLIWGAALGSNHSLLLTDGPSFQPDVYYLGKQ
PSLQELRNEGLAPESPLKEAKDSTPKKRPTSAISKSPTVKYAARAKQPEKMMFMRKCGWM
QRLSARGDVCACISDKNNSGYISILSELSATERLLYYQLSMVKTSIWKSLQSTDMLKLLE
NSIYLHALRQLLDLFTIVSNAVGVNSIHLTRIVQRTQYFGDLALLSKAKEITGLFELYAK
ALCDFITLSGFKHIGKIAREILQKHDNTFMELLGKEEKLTDFGPGLRRLFQLPIDRVKSY
AYLLGKLQGYFPEEAHERQMLKESSLSWEKLQATIDSCMADAEDTKAFWDSCPNKLAESL
KRPDRRIIRDSRKKPLQLVNAGRLSSNWFLLFNDVIVHAQGEPIDAKGVTKSSPKPSAGS
QIFTTHHVYNLSLVWAEPIPDTDQVKNALQLTMPEKTLSLQTNSQTAKAEWLWTINQTID
VLLTSGKEQKEIKSPNGRVPPKLARPGKHTFASHPQGKDATYEGMWLTGKPHGNGTLTWP
DRRKYSGNFTNGLQNGFGWSVEPASASGTKTKVYQGQWRDGKREGRGFLRHPNGDVYLGY
FRDNQCNGNGILQCVNPASIYVGQWKKDCFNGYGVKDDSLHGEKYMGFWQDNHRHGDGFV
ITVDGVYYEGTFNQDKLQGAGILVTEDGTCFQGQLTTGPTLNGKGTLTMPNGDYVEGNFN
GLWGDEVKLTGNFNKFAEEGPPPSLTRMLGQNTASAEAKWLDIFSECWQDLGCADKPDSR
KAWTCVAAALAVGKRELEFLEGLQADVDVPTLRKAIEELERIPQHNKNIITADDLKEKEK
YLSKAFDLPIHPLGRLIENLVNAFRASYVGIGAHQLLLPYAIDEVKCFIKKSYEVVRLLF
PEFPDYSTKPRTPVMEQPSADFYYDYTNNDGGQSEDSSGQVEQAKEDDVSQLITPESLLH
PLLLPKLCPALLTMYAVKNSDENERYLDRLNRLNRQHDMSLMAYLGIDQKFWLFEDAIYS
EPSKLKEMKDVSYLEAIHTLERISTAFSPADKLGVIESTMEAIDSQVQSKEIKGHVWSMD
DLFPLFQYVVTRARIPHLGSEIQFIEDLMDPGIIHGRLGILMTTLKACYIQICNENLKAL
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatggggaaaagctcaatgatgagaaaagagagctggcaaaatttcaatca
aagccatatacctggaagggcttcctctcttcaacagtaccaactggctttgatatcttt
aacaaaaaagatgtagtcaaaatatctcttggtaatcagcacatagcattcctgacgtct
gaccatgcagtgtactgctctgggtcaggtgaatatggacagcttggtcacggaaaattc
actgatgtgacaaagaaacctgtcttggtgagtgggttgaaaggagagaatgtgactgat
gtggtctgcggcggtgaccataccagtgtggtatgtgctgatggtatcgtcttctgctgg
gggaactcagcgaagggtcaatgcggtaccacagaggagaaagtgaacacgccaaacttg
gtcacgttagctgatgagacttgtgacccggtcgtgactcaaataagctgtggtgataca
catacgttagccttgaccaatcagggtcaggtttgggcatggggcactggcccacagctg
ggatgtggtacggggaacagcgtagtcgcaacgcctcaaaaactggatgccttttgcggt
aggaacgtcttaaaaatatcctgcggtagtacttacagtctagctatcgtgcaaaagatc
aaaacgttgaaaacgtcgagtctccagtcgaacgatacggaagaggatggcgattccagt
gtctgtattgcctgcgacgaggatgcgttctcagtgcacgaagaaggggacaccctggta
gtgacagataaccacatttgtattcatgacaagaagagtgtgctctctagcgtgaagagc
atttcccccgatagtctcgacatttctattgtgccaaagaagcagaatgcgatcaaagaa
ctgaaggaacgtacgtccgacgatgataacgccagccaaggtacttacacgctagaggat
gaagggtttgcagcatcgcaggcggataccgagatactcagagagacggatatggacgaa
gtcgacgtgtctttcaaggaagaacggaatgaccaaccgagccgaccctgcgatctgtcg
gcatccagcagttcatcgaagagacttcctctggacacttccgccaagcagtttcttctt
cggcaaatgagaccagtcaagttagtgagctctttacctcacggacagagaacatcatcc
agggataaaattttcaatttcgttcccaggatgctcgtttccggtatcgagaggatagtg
agtcctcagagtagcttcttgggaaatttgaaagccatggtccctgggagtatgggatct
cataggtctataccagccatcactacgagacacagcagtgtctcagtggaagcagacctt
tcgccatttaagtcacagtatgacgatgtgtttgacgatccacttctacaaacagaggtg
tggagttggggaagaggtaccatgggtcaactaggccaaggagatacattggaaaggaat
tcagaaattcttcttgaaacaagaccccatccagttatcattaagcagttgagtgccaaa
ggtattgtaaacatttacgctggcgtcacacattgtatagcagtcgcaagcagtggtcta
gcgttctcttggggagctagttctgatggtcagcttggccatactggtcaactcgtaccg
aagaaagtcaagatgcccggaagtaccctaatatggggagctgctcttggtagtaaccac
tcccttctactcacagacggaccaagttttcaacctgatgtctactaccttgggaaacaa
ccaagtctgcaagaattacgaaatgaaggcttagcccctgaaagccctctcaaagaggca
aaagactctaccccaaagaagcggcctacatctgccatctcaaaatcaccgacagtgaag
tatgctgccagagctaaacaaccagagaagatgatgttcatgagaaagtgtggatggatg
cagcgtctttcagccagaggagatgtatgtgcttgcatctctgataagaataattccggc
tacatctccatcttgagcgagctcagcgctaccgaaagattactctattatcagttgtcg
atggtgaagacatctatatggaaatctctccaaagtacagatatgctgaaactgttggag
aattctatctacctccatgcactccgtcagttactggatctgttcaccatagtatcaaac
gctgtcggtgtcaattccattcatctgaccaggatcgttcagagaacccagtactttgga
gatttggctctgctgagcaaggcaaaagagattacgggattgtttgaactgtatgccaaa
gccctctgcgatttcataactctctcaggattcaaacacatcggaaaaatcgcaagggag
attctccagaaacacgataatactttcatggaattgctcggcaaagaagaaaagctgacc
gattttggtccaggtttgagacgattattccagcttcccattgacagggttaagtcttat
gcttacctgctaggaaagcttcagggatactttccagaggaggcgcatgaacgtcaaatg
ctgaaggagagcagtttatcgtgggagaaactgcaagccacaattgactcttgtatggca
gatgcggaagacaccaaagcattctgggattcttgccccaataagctggcagaatctttg
aagagaccagatagaaggataatccgagacagcagaaagaagccattacagttggtcaat
gcaggacgcctttcctcaaactggtttctgttgttcaacgatgtcatcgtccatgcccag
ggtgaaccaattgatgccaaaggagttactaaaagttcaccgaagccctcagctggaagc
caaatattcaccactcatcacgtgtacaacctgtctctggtctgggccgaaccgatacct
gacactgaccaggtcaagaatgctttgcagctgactatgcccgagaagacgctctccctt
caaacaaactcacaaacagctaaggcagagtggctgtggactattaaccaaacgattgac
gtattgttgacctccggtaaagagcagaaagagatcaagtcacccaacggtcgagtgcct
cctaagctagcccgtccagggaagcatacctttgccagccatccccaggggaaagacgct
acctacgagggaatgtggctgacagggaaaccgcatggaaatggcactttaacctggcca
gataggaggaagtattctggtaattttaccaatggattgcaaaatggatttggctggtcg
gttgagccagcatccgcctcaggtacaaagaccaaagtttatcaaggccagtggagagac
ggaaagagggagggccgtggcttccttagacatcccaacggggacgtctacctgggttac
tttagagacaaccagtgtaacggcaatgggatactccagtgcgtcaacccagcgagtatc
tacgtgggccagtggaagaaagactgtttcaacggttacggagtcaaggatgactcactg
cacggggagaagtacatgggattttggcaagacaaccatcgtcacggcgatgggtttgtg
ataacggtcgacggtgtctattacgagggaaccttcaatcaagacaagttacagggagct
ggtattttggttaccgaagatggcacttgttttcagggtcaactgaccactggaccaact
ctaaatggaaagggtacgcttacaatgccaaatggtgattacgtggagggaaacttcaac
ggcctgtggggcgatgaggtcaaactcaccggaaattttaacaagttcgcggaggaggga
ccgccaccctccctcacaagaatgttaggtcaaaatacagcttctgcagaagccaagtgg
ttggacatattttctgagtgttggcaagaccttggttgtgcggacaaaccagacagccgg
aaagcctggacttgtgtggcagccgctcttgctgtcgggaaacgggagctggaattcttg
gaagggctgcaagcagacgtggatgttccgactttaagaaaagccatcgaagaattggag
agaatcccacagcataataaaaatattatcactgcagacgacctgaaggaaaaagagaag
tatctttcaaaggcctttgatctcccgattcatccattgggacggttaattgagaatctt
gtgaatgcattccgtgcatcctatgtgggtattggtgctcatcaactgctcttaccgtat
gccatcgatgaagtcaaatgttttatcaagaagtcatacgaagttgtacgacttctgttt
ccagagtttcccgactacagtaccaagccaagaactccagtaatggagcaaccttcggcg
gatttctattacgattacacgaacaatgacggtggccaatcagaggacagcagtggacaa
gtggaacaagcaaaagaagatgatgtgtcacagctgataaccccagagagccttctacac
ccccttctgttacctaaactgtgtcctgctcttctgaccatgtacgctgtcaagaattca
gacgagaatgagagatacttggacaggttgaaccggctcaacagacagcacgatatgtct
ctcatggcgtacctgggaatcgatcagaaattctggttatttgaagatgccatctactca
gaaccatcaaagctgaaggagatgaaggatgtgtcctaccttgaggctattcatactctg
gagaggataagtacggcattcagtccagctgacaaacttggcgtgatcgagtccacgatg
gaagccatagattcccaagttcaatcgaaagagataaaggggcatgtgtggtccatggat
gatttgttcccattgttccagtacgtggtcaccagggccagaatccctcacctgggatcg
gagatccagttcatagaggatttaatggatccagggatcatccatggccgtctagggata
cttatgactaccctcaaagcttgctatatacagatatgtaatgaaaacctcaaggccttg
taa
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