Apostichopus japonicus (Japanese sea cucumber): 139965006
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Entry
139965006 CDS
T10891
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04137
Mitophagy - animal
ajj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139965006
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139965006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139965006
03009 Ribosome biogenesis [BR:
ajj03009
]
139965006
04131 Membrane trafficking [BR:
ajj04131
]
139965006
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ajj04147
]
139965006
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
139965006
Ribosome biogenesis [BR:
ajj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
139965006
Membrane trafficking [BR:
ajj04131
]
SNARE
SNARE associated proteins
Others
139965006
Autophagy
Aggrephagy
Other aggrephagy associated proteins
139965006
Exosome [BR:
ajj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139965006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_5
AAA_2
AAA_22
AAA_14
RNA_helicase
TIP49
NPHP3_N
nSTAND3
Vps4_C
AAA_17
Mg_chelatase
AAA_28
ATPase_2
Parvo_NS1
IstB_IS21
AAA_18
AAA_25
ABC_tran
AAA_7
NB-ARC
AAA_24
DUF815
TsaE
NACHT
ResIII
Viral_helicase1
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
139965006
NCBI-ProteinID:
XP_071823249
LinkDB
All DBs
Position
23:complement(17501842..17517033)
Genome browser
AA seq
895 aa
AA seq
DB search
MTVYHHFSRNKVLQKCILRRPIQLVMTQAFLVHVKKLACSCCKKSSCVRNKAVIRLIRSE
EEGCRFSYLTQKKTKQSERKTNRKATEFQLKMADNGDDVATAILRTKSKPNRLVVEDAIN
DDNSVVSLSQAKMDELQLFRGDTVMLKGKKRRDTVCIVLSDDTTGDDKIRINRVVRNNLR
VRLGDIVSVQACPDVKYGKRIHVLPIDDTVEGITGNLFDVFLRPYFQEAYRPIRKGDIFL
VRGGMRAVEFKVIETDPGNYCIVAPDTMIHCEGEPIKREEEEENLNEVGYDDIGGCRKQL
AQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGVGKTLIARAVANETGAFFFLINGPE
IMSKLAGDSESNLRKAFEEAEKNSPAIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMD
GLKQRAQVIVMAATNRPNSIDGALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLAED
VDLEQVANETHGHVGSDLAALCSEAALQQIRNKMDVIDLEDDTIDAEVMDSLAVTMDDFR
FALGKSSPSALRETVVEVPNVSWDDIGGLENVKQELQELVQYPVEHPEKYLKFGMTPSKG
VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQAAPCV
LFFDELDSIAKSRGGNIGDAGGASDRVINQVLTEMDGMGSKKNVFIIGATNRPDIVDPAI
LRPGRLDQLIYIPLPDEPSRVSILKANLRKSPIAEGVDLIYLAKVTNGFSGADLTEICQR
ACKLAIRQSIEEEIRKQRERRDNPDLDMEIEDDEDPVPEITKDHFVEAMKFARRSVSDND
IRKYEMFAQTLQQSRGFGTNFRFPDEASAGGPAPASGSGGGGNFNNDDGDEDLYS
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgactgtataccatcatttctcacgaaataaagtgttacagaaatgcatattacggcgg
cccatacaactggttatgacacaggcctttttagtacacgttaaaaaactcgcatgttca
tgttgtaagaaatcaagctgcgttcgaaacaaagctgtgattcgactaattcgaagtgaa
gaagagggttgcagattttcctaccttacacaaaagaaaacgaaacagagtgaaaggaaa
acgaacagaaaagccaccgaattccaactcaagatggcagacaatggagatgatgttgcc
acagctattcttagaacaaagtccaaaccaaacagacttgtcgtagaagatgctataaat
gatgacaattcagtggtgtctttgtcccaggctaaaatggatgagctacagctcttccgt
ggggacactgttatgctcaaaggaaagaagagacgagacacagtttgcatcgtcctctca
gacgataccaccggtgatgacaagatccgcatcaaccgagtcgtcagaaacaacctacga
gtcagacttggagacatagtcagtgttcaagcctgcccggacgtgaagtatggaaagcgt
atccatgtactgcccattgatgatactgtggagggaattacagggaacctctttgatgtt
ttccttcggccttactttcaagaggcataccgtcccattcgtaagggagacatcttcctg
gtgcgtggaggaatgcgtgcagtggagtttaaggtcatagaaacagatccaggcaactac
tgcatagtagctccagataccatgatacactgtgaaggagaaccaatcaagagagaggaa
gaggaggagaacttgaatgaggtcggttatgatgacattggcggttgccgtaagcagtta
gcccagatcaaagagatggtggagctgcctcttaggcatccctctctcttcaaagcaatc
ggtgtaaagcctccaagaggtatactgttgtacggacctccaggtgttggaaagactttg
atcgctagagcagtggccaacgaaacaggagctttcttctttctgatcaatggaccagag
ataatgagtaaactggcaggtgattccgagtctaatctgaggaaggcatttgaagaagct
gagaagaactccccagctataatcttcatcgatgaattggattcaatcgcaccaaagaga
gagaagacacatggtgaggtcgaacgtaggattgtctcacagcttttgacattgatggat
ggactcaagcaaagggcacaggtcatcgttatggcagctaccaacagaccaaacagcatt
gatggtgctctgcgccgttttggacgatttgaccgtgagattgacattggcatcccagat
gctaccggtcggttagagattctgagaatccacaccaagaatatgaaacttgctgaagat
gtggatttggaacaagtcgcaaatgagacccacggccatgtcggttccgatctggctgcg
ctatgctctgaagctgcacttcaacagattaggaacaagatggacgtgattgatctggag
gacgataccattgatgcagaggtcatggattctttggccgtcaccatggacgacttcagg
tttgctcttggaaagagcagcccaagtgctctgagggagacagtggtagaggtaccaaat
gtgtcctgggatgacattggtggtctcgagaatgtcaaacaagaactccaggagctggtg
cagtacccagtggaacatccagaaaagtacctcaagtttggcatgacacccagcaaagga
gtcctcttctatggtccaccgggatgcggtaagaccctcctagccaaagccatcgccaac
gaatgtcaggcaaatttcatcagtatcaaaggaccagaactgttgactatgtggtttgga
gagtcagaggctaacgtcagggatgtgtttgataaggcaaggcaagctgccccatgtgtc
ctcttctttgatgagttggactccatcgccaagtctcgaggcggcaatataggagatgca
ggtggtgcatcagacagggtcattaaccaagtcctcacagagatggatggtatgggttca
aagaagaatgtcttcatcatcggtgcaacaaacagaccagacattgttgatccagctata
ctaagaccgggacgtcttgatcagctgatatacattcccttacccgatgagccatctcgt
gtatccattctgaaggccaacctcaggaaatccccaattgctgagggtgttgacttgata
tatctggctaaagtcaccaatggattcagtggagcagacttaacagagatctgtcagaga
gcctgtaaactcgccatcaggcagagtattgaagaagagatcaggaaacagcgtgaacga
agagacaatcctgacctggatatggagattgaagatgatgaagaccctgtcccagaaatc
accaaggatcactttgttgaggccatgaagtttgccagacgatctgtcagtgacaacgac
atccgaaagtatgaaatgtttgcacagacgttacaacagagcagaggctttggaacaaat
ttcagatttccagatgaagcaagtgcaggaggacctgcacccgcctctggttcaggcggg
ggtggcaactttaacaatgatgacggagatgaagatttatacagctaa
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