Apostichopus japonicus (Japanese sea cucumber): 139965362
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Entry
139965362 CDS
T10891
Name
(RefSeq) nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139965362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139965362
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139965362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
ANAPC3
Motif
Other DBs
NCBI-GeneID:
139965362
NCBI-ProteinID:
XP_071823755
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All DBs
Position
3:19218436..19236070
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AA seq
830 aa
AA seq
DB search
MDEMEGFGDLLRSAEQLTADVDTGTELPRIEQNLHQIMETSQRLWTKTAQIGGQDETDVK
ALILLGSKGLDVPHISHRLESLSTAKTFEPLEPVGDTDIQGFLRNERENNLLAVIEETKQ
NSFQQAEQRFWDSLQSEWDQEKQRILDTLIGSSPDLIDVTADSSSSMISDRVHMEGRSNL
DNVEMAYARQVYIYNDRVVSRGVRPNLVDLFKEASVQFENKNVTELWTMVGEMSSVPACE
GSDVADTRSTSRVQASLIAQARGFLESCYVEYIRNIVSSNMRQAMLGGIPGTYPLVQAFL
KIKLPVQLPGLEDGEVDNLPIWPIIYYCLRCGDLDAIATAVRSASQDLGEFEEFLQEYME
NEDRRLSPGIETKLRLHYRRAVRNSSDPFKRAVYCIMGKCDISDNHVEICDKTEDYLWLK
LCQVSFQDKTPSSSPSDHLSLQTLQVTLCEEYGESHFSAHLNPFLYFKVLFLSAQFEAAI
EFLSRTDSNLRSHAVHAAIALHELGLLILPENTQTPILSRNPEDPSPMQRLNYTRLIIMY
TAKFEATDSREALQYYFLLRNIHDTHGKSYFVKCLSELVVETREFETLLGRREADGSRRQ
GAIDKFGVDTQNVIETVADDTENKGLFEEAVKLYDLGGNVSKVLEIMNRLLSPLVSMAMT
PQSKRDRLRRQAVALAERYQMQAVTGSRANTRSFYLLLDLMTFFDQYHAQEHDQALETIN
RLQVIALTRDTVDDRVTSFKQYTDEIRRNLPDILLATMNILCSKYRSIRSNTTQSPRGRL
GSRPEDGGKERHQSSLRMQAKSLITFAGMLPYRLPGDTNARLVQLEVLMN
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaatggaaggattcggagacttgctccgtagtgcggagcagcttacagctgat
gtcgatacgggaacagagctccctcggattgaacagaacctccatcaaattatggaaacg
agtcaacgtttatggacaaaaacagctcagatcggaggacaggatgaaacagatgttaaa
gctctgatcttgttaggttccaaaggccttgatgttcctcacatctcacatcgtttagaa
tccttgagcactgcaaaaacatttgaacctttggagcctgtaggagacacagacattcag
ggatttctaagaaatgaaagagaaaataaccttctggcagttatagaagaaacaaaacag
aattcgttccagcaagccgagcagagattctgggactcattgcagagcgagtgggaccag
gagaaacagagaatattagatactttaattggttccagtcctgatttaatcgatgtcaca
gccgactccagcagcagcatgatatcagaccgagtacacatggaaggtcgcagtaacctt
gacaacgtcgagatggcttatgcccgacaggtgtacatttataatgatagagtggtatcc
agaggggtcagacctaaccttgtggacctcttcaaagaagcctctgtgcagtttgaaaat
aaaaatgttacagagttatggaccatggttggtgagatgtcttcagtaccggcctgtgag
ggatctgatgtagctgacacccgtagtacatccagggtacaggccagtctgatagcacaa
gcaaggggtttccttgaaagctgttatgtggaatacatcagaaacattgtgagttccaac
atgaggcaggccatgttaggaggtataccaggaacttatcctctggtccaagccttcctg
aaaatcaaattaccagtccagctgcctggactagaggatggtgaagtggacaaccttccg
atatggccaataatttactactgtctgaggtgcggcgatctggatgccatagcaacagct
gtgcggagtgcttcacaagatttaggagagtttgaagaatttctacaagagtacatggag
aatgaagacagaaggctctctccaggaatagaaaccaagctgaggttacattacaggaga
gctgtcagaaacagttctgatccattcaagagagctgtgtactgcatcatgggtaaatgt
gacatcagcgataaccatgttgagatttgtgacaagacagaagactatctttggctaaag
ctctgccaggtgtccttccaggacaaaactcccagctctagtccctctgaccacctctcc
ttacagaccctccaggtcaccctctgtgaggaatacggagagtcacacttcagcgcccat
ctcaatccattcctctattttaaagtcctcttcctgtcagctcaattcgaggctgccata
gaattcttgtcgcggaccgactcgaatctacgaagccacgccgttcacgcggccatagcc
ctacatgagttagggttgctcattctaccagaaaatactcagacaccaattttgagcaga
aatccagaagatcccagccctatgcagagattaaactacactagactcatcattatgtat
acagctaagtttgaggcaacagattcaagggaagccttgcagtattatttccttctaaga
aatattcatgacactcacggaaagagctactttgtgaaatgtctcagtgaacttgtggtg
gagaccagggagtttgaaactttactagggaggagagaggcagacgggtctcggagacag
ggcgccatcgataaatttggggtggatactcagaacgtgatagagacagtggcagacgac
acagaaaacaaaggactgtttgaagaagctgttaaattgtatgatctcggagggaacgtc
agtaaagtattggagataatgaaccgtctgctgagtcctttggtttccatggcgatgact
cctcagtccaagagagatcgccttcggaggcaagcagtggccctagctgagaggtaccag
atgcaagctgtgactggaagcagggccaacacccgttccttctatctcctcctcgacctg
atgaccttcttcgaccagtaccacgctcaggaacacgaccaggctctagaaacaatcaac
agactccaagtaatagccttaacacgtgacactgtggacgatcgagttacaagttttaag
cagtacacagacgagattcgtcggaatctgccggatattttactcgccacgatgaacatc
ctctgctccaagtaccgttcgattcgttcaaataccactcagagtcccagaggtaggctt
ggatcacggccagaggacgggggtaaagaaaggcatcaatcaagcctgagaatgcaagcc
aagtcactgatcacatttgctggcatgttgccatacaggttaccaggagacaccaatgct
cgtttagttcagttggaagtgctcatgaactaa
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