Apostichopus japonicus (Japanese sea cucumber): 139965696
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Entry
139965696 CDS
T10891
Name
(RefSeq) DNA topoisomerase I, mitochondrial-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ajj03032
]
139965696
Enzymes [BR:
ajj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139965696
DNA replication proteins [BR:
ajj03032
]
Eukaryotic type
DNA Topoisomerases
139965696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
ACR_tran
Motif
Other DBs
NCBI-GeneID:
139965696
NCBI-ProteinID:
XP_071824419
LinkDB
All DBs
Position
3:complement(27136353..27222961)
Genome browser
AA seq
686 aa
AA seq
DB search
MTSVALEFSYVALCGTLCYVQFGKHNQTTNTISRRKIVICIFLQVAVVSLLLQGLLYPLF
VWNTLHWIMSSDNLSQGGAKRTPANNSEDGARSKGTLKENEDKESSGKDEKPKEEIIEKE
RRNVNNKGPVLAPLHEPFPPNIKFSYGGNNYYPKLNAEEMDDLYTRMIDHMHTAIKAINK
QIFESMRPGVSKDEQKKYDFDVYKYLLEQAKLKIKPTQGGAKRTPANNSEDGARSKGTLK
ENEDKESSGKDEKPKEEIIEKERRNVNNKGPVLAPLEEPFPPNIKFSYGSENSVHQLKAE
EVGDLYTRMIDHMHTAIKEINKQIFESLRPEVSKDEQKKYDFHVYKYLLEQAKLRIKLTQ
GEKDWMKYETARTLKKRLPKIRDAYKKDWESTDREIRQRGVALYFIDKLTFRAGNKAEEG
EAAEEEEEGDEEGAVGCCNLMVKHIMLLPQEGNKCFVEFNFVGKSKVEYQKKVEVEKKVY
EKIQEFKHHREESEELFDKLTPTKLNTYLKTQMPRLTTRVFRTCNASITLQDKLVEFTNE
ALKTVNETHEDRLLLLKRADHQAVQAAAVLCNHKRSTPKGFDKQMEKLEAEVKAKKDDIK
NAEKDMQGGNEEMEQLVKSLSVELKKLTLSVEDKKKSEHINVATTLKYYLDPRIRVAWSN
EYKVYGEEFYKKEQKWVLKEKSGYKF
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgactagtgtggcactcgaattcagttacgttgcactgtgtggtactctatgttacgta
cagtttggaaaacacaaccagacaacaaataccatttccaggcgtaaaattgtcatctgt
atatttctgcaagtcgctgttgtctctttgctacttcaagggctgttatatccacttttt
gtttggaacacactccattggattatgtctagcgataatctcagtcagggtggtgcgaaa
aggactcctgccaacaactctgaagatggggcaaggtcaaaggggacattgaaagagaac
gaggacaaggaatcaagtggaaaagatgaaaaacccaaagaagaaataatagagaaagag
cggaggaatgtgaataacaagggacctgtccttgcacccttacacgaaccctttcctccc
aatatcaagttttcctatggcggtaacaattattaccccaagctcaacgccgaagagatg
gacgatctctacactcggatgatagaccacatgcatacagctatcaaagcgatcaacaag
caaatctttgaatctatgcggccaggggtatctaaggatgaacagaaaaagtacgacttc
gatgtgtataaataccttctggagcaggcaaaactgaaaataaaaccaacacagggtggt
gcgaaaaggactcctgccaacaactctgaagatggggcaaggtcaaaggggacattgaaa
gagaacgaggacaaggaatcaagtggtaaagatgaaaaacccaaagaagaaataatagag
aaagagcggaggaatgtgaataacaagggacctgtccttgcccccctcgaggaacccttt
cctcccaatatcaagttttcctatggcagtgagaattctgtccaccagctcaaagccgaa
gaggtgggcgatctctacactcggatgatagaccacatgcatacagctatcaaagagatc
aacaagcaaatctttgaatctttgcggccagaggtatctaaggatgaacagaaaaagtac
gacttccatgtgtataaataccttctggagcaggcaaaactgagaataaaactaacacag
ggagagaaagattggatgaaatatgagactgccaggacattgaagaaacgtttgccgaaa
atcagagatgcatacaaaaaggattgggagagcacggacagggaaatcagacaacggggt
gtagcactctatttcattgataagttgacctttagagctggtaacaaggcggaagaaggt
gaggctgccgaagaggaggaggaaggggacgaggagggcgcagtgggctgctgcaatctc
atggttaagcatatcatgttgctgccgcaggagggaaacaagtgttttgttgagtttaat
ttcgtcggaaagagcaaagtagaatatcagaaaaaagtagaagtagagaaaaaagtctat
gagaaaattcaggaatttaaacatcatagagaagaaagtgaagaattgtttgataaactg
acaccgaccaaactgaacacatacctgaagacacagatgcctcgcctgactactagagta
ttcaggacttgcaatgcctcaatcactctacaggacaaactagtggagtttacaaacgaa
gctttgaaaactgtgaatgaaacacatgaagacagattactattgttgaagcgggccgac
catcaagctgtccaggctgcagcagttttatgcaaccataaacgttctaccccaaagggt
tttgacaaacagatggagaagcttgaggcagaagtcaaggccaagaaggatgacataaag
aatgccgagaaggacatgcagggtgggaatgaggaaatggaacagttggtcaagagtctg
agtgtagagctgaaaaagctgacactatctgttgaagacaaaaagaagagcgagcatatt
aacgttgctaccacccttaagtactacttggatccccgtataagagtcgcttggagtaac
gaatataaggtttatggcgaggaattctacaaaaaagaacagaaatgggtgttaaaagag
aaatcaggttataaattctga
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