KEGG   Apostichopus japonicus (Japanese sea cucumber): 139966108
Entry
139966108         CDS       T10891                                 
Name
(RefSeq) DNA annealing helicase and endonuclease ZRANB3-like isoform X1
  KO
K25861  DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Brite
DNA replication proteins [BR:ajj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    139966108
DNA repair and recombination proteins [BR:ajj03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    139966108
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII Zn_ribbon_RanBP HNH HNH_5 MYND_ZMYND11_ZMYD8 ERCC3_RAD25_C Flavi_DEAD
Other DBs
NCBI-GeneID: 139966108
NCBI-ProteinID: XP_071824907
LinkDB
Position
4:2106857..2155471
AA seq 1513 aa
MDEDDFEFLPKSLRNKLLPFQRKGVQYAIGKQGRCLIGDEMGLGKTIQAISVAYYYRSEW
PLLVVLPSSMKYPWIEELEKWLPCLQPNDINLINSSTDVSNISKAAVSLVGYGLMQSSFK
TLLEALHERDFGVIIVDESHFLKNPKAVRTKTLIPLLTKAKRVLMLSGTPALARPAELYS
QINCLSKGQFGSWTNFAKRYCDAKWKFFGRLKKWDTSGACNLAELHKKLTTSVMIRREKK
EVLTELPPKRRQKVPFELSESKQTKELDALWSELRSYLNREAASEDGKDAGFEIRRLSMQ
LYISTGKAKIAAISEYVRMLLDNHDMKFLVFAHHKEILTAIVQTTQAYAREKESTLKYIR
IDGDVPHIERMKEVNRFQQDPCVRVAALSIMAAGTGLTLTAASHVVFAELHWTPGVLEQC
EDRAHRIGQHNAIHIHYLIAKGTIDEWMWSALNRKVSVLSSTLNGRVQQMNAEVLGEGVG
AFLKNATLLPSTLDDEEDDSFFFSQTPKKSGSKDIRSFMQPSQPRKQGTPPSKQGASMDV
PSLIITLDDSDDCEDTGKEIETHNRESLGHDAGSQDTITYSSNSSTTLPPVSSPVASAEP
SQSPEDLTEYSEKERDLPSDVANTSSMPISESYLLESSDSEYELVTGVGFKSRPKPSERS
CQSSPFNDATQSCSGKSTPGLSSSINEKHSGEAVGKTEDAAGTSAGDHSDIKVDKDLEVP
ISQWNCASCTFLNHESLPSCEICDTPRKRRGRRPRVKTRSAIKKKMKNKKTQNVVTETLS
DSDDDFEMLTRVETRVDKKAVKSKGEVKGQKVMEDGNDEYVQMTDILPNQDTPVTGMKEK
NLKSGYGSSSDKKVSHHGIDISDSDNDNNDDVLSLDPLRTSPGCSDQRASTGRRILQREF
HKEETENAQRISKKSIHVSKAEGKGKKSPPTKLEENMQSSSVKQFSLEDELSDALFSDEE
VSHDNREEGSDRKATKLSQSDIEQEVKGAVDSVLNSPLTSRSKVTSWTCMEPSCQFVNTS
SDVECENCWTTKPKQVTVETSPSLERHNKFESGLQSPGFRKASELLEEQDQSQMGTCKSD
SISPQPSGSKMRLVQAETDCIGKADRTSDKSDVKEIKSERVKGAVEEDVEMTSQETPIPK
IYEMFLYCASKFTERIYLYDVDQQPLNCSFQPLDLRMRDIDNLPPVLHVPQNMKAVRRFL
KEWDSLTELKKRKLRKSGLVFDSPTAAVDALMKKRPFQLSTKRFLTKDDLATAARQKAED
VGGSVRIIHKKPKTSRDGQSPQESKSLQFTKSPVTGKKRKELPDEETEESCERQEPKKKI
RQDTESNQEMSKFGFVQALSADGVPLCVFCNGPVASFSNKNAAWDTRYCSEECKMEHQIR
WKSSKYVREQLLEAEHGVCQICNLDAHTIYKNIRDLPKSKRKDILSETAYSDLSAKLLNE
MIKSPVEGQFWHADHIIPVYKGGGLCSLENFRTLCVLCHAKVTAEQSHERKETRADEANR
KAGLRDIRKFLTR
NT seq 4542 nt   +upstreamnt  +downstreamnt
atggacgaagacgacttcgaattcttgccgaagagtctacgtaataaattacttccattt
caacgaaaaggagttcagtatgctatcggaaaacagggaaggtgtcttattggtgatgag
atgggtctcggtaagacaatacaagctatttcggtggcatattactaccgttccgagtgg
cctcttctcgtcgttcttccctcgtccatgaaatatccttggattgaggaattggaaaag
tggttgccatgcctacaacctaacgacattaatctcataaactccagtacagacgtaagt
aatatttccaaagcagcagtttcattggttggatatggtctaatgcaaagcagtttcaag
acactcttagaagcactacacgaacgagattttggagtcatcatagtagacgagtctcat
tttctcaagaacccaaaagctgtacgaaccaaaacactcatcccactcttgacaaaggca
aagagagtccttatgctaagtggaactccagctttagcaagaccagcagaactgtactct
caaataaactgcctcagcaagggtcagtttggatcttggacgaattttgccaaaagatac
tgtgatgcaaagtggaaattctttggcaggctgaaaaaatgggatacttcaggtgcgtgt
aatttagcagagcttcacaagaaactgaccacatcagtcatgattcggagggaaaagaaa
gaggtcttgacagagttaccacccaagaggaggcagaaggtgccatttgaattgtctgag
tcaaagcagacaaaagaattagatgcactatggtcagagttaaggtcatatctaaacagg
gaggctgcctcagaagatggtaaagacgcgggattcgaaatcagacgcctctccatgcaa
ctttacatttcaacgggcaaagcaaagattgcagccatttcagagtatgtgagaatgtta
ctggataaccatgatatgaagttccttgtctttgcccatcacaaagaaatcctgacagcc
attgtccagaccactcaggcctacgcaagagaaaaggaatcaaccctcaagtacataagg
attgatggagacgtcccccatattgagagaatgaaagaagtgaaccgtttccagcaagat
ccctgtgttcgtgtagctgcactgagcatcatggcagctggaacgggtctcaccttgact
gctgctagccatgtagtgtttgcagagcttcactggactcccggcgtgctcgagcagtgt
gaagacagagctcaccgtattggtcagcacaatgccattcatattcattacttgattgcc
aagggaaccattgatgaatggatgtggtcagctctcaatagaaaggtcagcgttctcagt
agcacactgaacggcagggttcaacagatgaacgccgaggtcctaggagagggtgttgga
gcattcctcaaaaatgctaccttgttgcccagtaccttggatgacgaagaggatgatagc
ttcttcttctcacaaacaccaaagaaatcaggaagcaaagatatcagatcatttatgcaa
ccaagtcagccaagaaagcaaggaacacctccatcaaaacaaggagccagcatggatgtg
ccatctctgatcataacgttagacgatagcgacgattgtgaagacaccggcaaagagata
gaaactcacaacagagaaagcttaggacatgatgcaggatcacaggataccatcacttat
agcagtaattcatctactacattaccaccagttagttcaccagtagcttcagccgaacca
tcacaatccccagaagatctcaccgaatactctgaaaaagagcgagaccttccatctgat
gttgccaacacttcctctatgcctattagtgaatcatatcttttggaatcatcagactct
gagtatgaactcgtcaccggagttggatttaaatctcgtccaaaaccatccgagcgatct
tgccaaagttctccttttaatgatgctacacagtcttgctccggcaaatccactccaggt
ctttcttcaagtattaacgaaaagcactcaggtgaagccgtcggtaaaacggaggacgcg
gcagggacgagcgcaggtgatcatagtgacattaaagtcgataaggatctggaagtacca
atcagccagtggaattgtgcttcttgtacatttcttaaccacgagtctcttccttcgtgt
gaaatttgtgacacaccaagaaagaggagaggaaggagaccaagagttaagacgagaagc
gcgattaagaagaaaatgaagaacaagaagacccaaaatgttgttacggaaactctttca
gattctgatgatgactttgaaatgctgacaagagttgagacgagagtcgacaagaaggct
gtcaagagcaagggtgaggtcaaaggtcaaaaggtcatggaggatggaaatgatgagtat
gttcaaatgacagatattttgccaaatcaagatacaccagttactggaatgaaagaaaag
aatctgaagtcaggttatggtagcagttcggacaaaaaggtctcacaccatggtattgac
atatccgattctgataacgacaacaacgatgatgtattgagtctggatccactgaggaca
agtcctggttgttctgatcaaagagcttccacaggaagaaggattttacagagagagttt
cacaaagaggagactgaaaatgctcaaagaatttccaaaaaatcaattcatgtaagcaaa
gcggaaggtaaaggtaagaaaagtccaccaacgaagctggaagaaaatatgcaatcttca
tctgttaagcaattcagtctggaagacgaacttagtgatgcacttttctctgatgaggaa
gtttctcatgacaaccgagaggaaggctctgatagaaaagcaacaaaattgtcacagtca
gatattgagcaggaggtcaaaggtgctgttgactctgtgctaaactcacctttgacttcc
aggtcaaaggtcacatcctggacctgtatggaaccatcatgtcagtttgtgaatacatca
tctgatgtagaatgtgaaaactgctggactactaaacctaagcaggtgacagtggaaact
agtcctagtctggaaagacacaataagtttgagtcaggcctgcagtcaccagggtttaga
aaagcttctgaacttttggaagagcaagatcaaagtcagatgggtacttgcaaaagtgat
tcaatttcacctcaaccttctgggtcaaagatgaggctcgttcaagcagagactgattgt
attggaaaagcagacagaacttctgacaagagtgatgtgaaagaaataaagtcagagaga
gtgaaaggggcagtagaggaagacgtggaaatgacatctcaagaaactccaataccaaag
atctatgagatgttcttgtactgtgcgagcaaatttaccgaacgtatttatctatatgac
gttgatcagcagcccttgaactgttcattccagccactagaccttcgaatgcgtgacatt
gataacttgcctccagttctccatgtaccccaaaatatgaaagcagtcagacgatttctt
aaagagtgggacagtcttacagaattgaagaagcgtaaactgaggaagagtgggctggta
tttgatagtccaacggctgccgtggatgcgttaatgaagaaacgtccatttcaactcagc
acaaagagattcctcactaaggatgatcttgcgaccgctgctcgtcagaaggcagaggat
gtcggtggcagtgttcgcatcattcataagaaaccaaagacgtctcgtgacggccagagt
ccccaagaatctaagagtcttcaattcacaaaatctcccgtgacaggtaagaagaggaaa
gaactgccagatgaggaaaccgaagagagctgtgagaggcaggaaccaaagaagaagatc
agacaggacacagagagcaatcaagagatgtcaaagtttggctttgtgcaggcactgagt
gcagatggtgttccgttgtgtgtgttctgtaatggcccggttgcgagtttctctaacaag
aatgcagcgtgggatacccgttactgttcagaggagtgtaaaatggagcaccagattcgt
tggaagagcagcaagtatgttagagagcagttactagaggcagagcatggtgtttgtcag
atctgtaacctagatgcccacaccatctacaagaatattagggaccttccaaagagtaaa
cgtaaagacatcctctcagagacagcatattctgacctctcggctaagctattgaatgag
atgataaagagccctgtggaggggcagttctggcatgccgaccacatcatcccagtgtac
aagggaggagggctctgctcactggagaacttccgaaccctctgtgtcctctgccatgcc
aaagtcacagctgagcaaagtcatgagaggaaggaaaccagagcagatgaagccaatcgt
aaggccggactcagggatatcagaaagttcttaacaagataa

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