Apostichopus japonicus (Japanese sea cucumber): 139966137
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Entry
139966137 CDS
T10891
Name
(RefSeq) uncharacterized protein isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ajj04121
]
139966137
Enzymes [BR:
ajj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139966137
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139966137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
Zn_ribbon_Brz
Baculo_IE-1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
139966137
NCBI-ProteinID:
XP_071824961
LinkDB
All DBs
Position
4:2697927..2734118
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AA seq
584 aa
AA seq
DB search
MADAAAGHQLKSSLRCRHCLYSLLQGDAAELEAGCSLCPQGESQSPTCIQKSIEEASWTK
GKLLCLKCGGSLGSFDFTVQATRGLGLHPAVPCVHLVRSRTDRCFMASPPVARVKPFQVE
EKPAGDMPLENHKVSVSLCSKHGVTGKSELHNMDLCWHSSLTKESSSLAQSSALMTNCGC
EQHGRAALNDSSLAKTNTEKWNDTSSENDPFLLQMFNEDTETVTTYIANRLRDDKKERKV
QYCSHSCQIYHPQVHSNCSDNKMRDKPPLAPEDTSTEPPVNGIETSDIEGAQLLLAERNP
LPNARDDLSLGDASSHEATIEEELEVSSSSPPPHLQESPEDFLHGWDMLEDLEELNSSTY
PSQTRAELKREKNRRKREKRKLKKRSNMYFQVLDQDIKGIPPSKFEEVTGLSLGEKTVQE
YTVCAVCLDLFFNPRACSPCGHLFCEQCLRQLKRFHPTSTPCPLCRTVIQVTIPHESLNN
ALRKLFPAQMKQRREAHGGVKQIHPLPRTQTIPSVWLPLFSQQMTRTRNRRRMFWSLQPN
STLDYHDFGRLWVQTLRWRFTVAGYGLLALLFVCACSVLVINFV
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgctgccgctggtcatcaactgaaatcgtctttgaggtgtagacattgcctt
tacagtttactccagggagatgcagctgaactcgaggctggttgctctttgtgcccacag
ggagaatctcagagcccgacttgcattcagaaatccattgaagaggccagctggacaaaa
ggcaaactcctttgtctcaaatgtggaggcagcctaggttcatttgacttcactgtgcaa
gcgacccgtgggcttggactccaccctgctgtaccctgtgtccatctggtgaggagtcga
acggaccgttgtttcatggcctctcccccagttgcacgggtgaaaccctttcaggtggag
gagaagccagctggggacatgccattggagaatcataaggtttcagtgtccctttgttcg
aaacatggagtaacaggaaaatcagagttacataacatggatctctgttggcattcaagc
ttgaccaaggaaagcagcagcctcgcacagagtagtgctctaatgacaaactgtggttgt
gaacaacacgggagagccgctttgaacgatagttctctcgctaaaacaaataccgaaaaa
tggaacgacacatcttcagaaaacgatccgtttcttctacagatgttcaacgaagatacg
gaaactgtgaccacttatatagcaaatagactcagagatgacaagaaggagaggaaagtg
caatactgcagtcattcttgccagatataccacccacaagtgcattccaactgctccgac
aacaaaatgagagacaagcctcctctggccccagaagacacctccaccgaaccaccggta
aacggtatcgaaacttcggacatagagggagcccagttgctgttggcagagaggaaccca
ctacccaacgccagggatgatctttcgttaggcgatgcttcgagtcacgaggccaccata
gaggaggaactggaggtatcgtcgtcttcacccccgccacacctgcaagagagtccggaa
gatttcctacatggctgggatatgttggaggatttggaggaactcaattcctcgacgtat
cccagtcaaaccagggccgagctgaaacgggagaaaaaccgccgcaagagagagaagagg
aaactgaaaaagagaagcaatatgtatttccaagtcctggaccaggatatcaagggcatt
ccaccttccaaatttgaagaggtgactggactctcactcggagaaaagactgtgcaagag
tataccgtctgtgctgtgtgtctggatctgttcttcaacccgagggcttgttccccttgt
ggacatcttttctgcgagcagtgcctgcgacagctgaagaggtttcacccgacgtctaca
ccatgtccactttgtaggactgtcatccaagttaccattccacacgagagtctaaacaat
gccctccgaaaactcttccccgcccagatgaagcaaagacgagaagcgcatggaggagtc
aagcaaattcatcctctcccgaggacacaaaccatcccctccgtctggctccctctcttc
agccaacagatgacgaggaccagaaaccggcgtaggatgttttggtcgcttcagccaaac
agtacgctagactaccacgactttggacggctctgggtgcaaacgttacgatggagattc
actgttgcagggtatggcctattggctcttctctttgtgtgtgcatgctcagtactggtc
ataaactttgtgtga
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